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Summary Expression Phenotypes Gene Literature (17) GO Terms (3) Nucleotides (93) Proteins (51) Interactants (29) Wiki
XB-GENEPAGE-6464886

Show:     All X. tropicalis X. laevis

Nucleotide sequences for bdp1 - All

RefSeq mRNAs(12)
Models - Gene (14)
Models - mRNA (15)
mRNAs (12)
ESTs (15)

RefSeq mRNAs (12)

Accession Version Protein Name Length Protein Species
XM_002934835 XM_002934835.5 transcription factor TFIIIB component B'' homolog isoform X1 10991 bp XP_002934881 X. tropicalis
XM_031893652 XM_031893652.1 XP_031749512.1 transcription factor TFIIIB component B'' homolog isoform X2 10985 bp XP_031749512 X. tropicalis
XM_031893657 XM_031893657.1 XP_031749517.1 transcription factor TFIIIB component B'' homolog isoform X3 10982 bp XP_031749517 X. tropicalis
XM_031893664 XM_031893664.1 XP_031749524.1 transcription factor TFIIIB component B'' homolog isoform X4 10973 bp XP_031749524 X. tropicalis
XM_018244406 XM_018244406.2 transcription factor TFIIIB component B'' homolog isoform X1 7297 bp XP_018099895 X. laevis.S
XM_018244407 XM_018244407.2 transcription factor TFIIIB component B'' homolog isoform X2 7294 bp XP_018099896 X. laevis.S
XM_018244408 XM_018244408.2 transcription factor TFIIIB component B'' homolog isoform X3 7282 bp XP_018099897 X. laevis.S
XM_018244409 XM_018244409.2 transcription factor TFIIIB component B'' homolog isoform X4 7278 bp XP_018099898 X. laevis.S
XM_018264990 XM_018264990.2 transcription factor TFIIIB component B'' homolog isoform X1 8610 bp XP_018120479 X. laevis.L
XM_018264999 XM_018264999.2 transcription factor TFIIIB component B'' homolog isoform X2 8607 bp XP_018120488 X. laevis.L
XM_018265006 XM_018265006.2 transcription factor TFIIIB component B'' homolog isoform X3 8592 bp XP_018120495 X. laevis.L
XM_018265015 XM_018265015.2 transcription factor TFIIIB component B'' homolog isoform X4 8526 bp XP_018120504 X. laevis.L

Models - Gene (14)

Source Version Model Species
NCBI 10.1 XBXL10_1g5582 X. laevis.S
NCBI 10.1 XBXL10_1g3068 X. laevis.L
NCBI 10.0 XBXT10g004856 X. tropicalis
ENSEMBL 10.0 bdp1 X. tropicalis
Xenbase 9.2 gene2884 X. laevis.L
Xenbase 9.2 gene17549 X. laevis.S
JGI 9.1 Xelaev18010865m.g X. laevis.S
JGI 9.1 Xelaev18008132m.g X. laevis.L
Xenbase 9.1 gene30363 X. tropicalis
ENSEMBL 9.1 ENSXETG00000034427 X. tropicalis
JGI 7.1 Xetro.A01767 X. tropicalis
JGI 6.0 XeXenL6RMv10010517m.g X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_113000025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1130024 X. tropicalis

mRNAs based on gene models(15)

Source Version Model Species
NCBI 10.1 XBmRNA10463 X. laevis.S
NCBI 10.1 XBmRNA5547 X. laevis.L
ENSEMBL 10.0 ENSXETT00000093456 X. tropicalis
NCBI 10.0 mRNA024064 X. tropicalis
Xenbase 9.2 rna51263 X. laevis.S
Xenbase 9.2 rna8376 X. laevis.L
ENSEMBL 9.1 ENSXETT00000074360 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093456 X. tropicalis
Xenbase 9.1 rna58140 X. tropicalis
JGI 9.1 Xelaev18010865m X. laevis.S
JGI 9.1 Xelaev18008132m X. laevis.L
JGI 7.1 Xetro.A01767.1 X. tropicalis
JGI 6.0 XeXenL6RMv10010517m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_113000025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1130024 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
XM_031893652 X. tropicalis
XM_031893657 X. tropicalis
XM_002934835 X. tropicalis
XM_031893664 X. tropicalis
XM_018264990 X. laevis.L
XM_018244407 X. laevis.S
XM_018244409 X. laevis.S
XM_018244408 X. laevis.S
XM_018265006 X. laevis.L
XM_018244406 X. laevis.S
XM_018265015 X. laevis.L
XM_018264999 X. laevis.L

ESTs (15)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8921875 EL836062 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TGas038p03 AL648264 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas038p04 AL651865 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7794453 CX929196 5' X. tropicalis NIH_XGC_tropTe4 testis frog
st54h24 DC180093 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7708252 CX961306 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7708252 CX961305 3' X. tropicalis NIH_XGC_tropTe5 testis frog
rst54h24 DC149805 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
PBX0149E06 AW645231 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:7297107 CO383743 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
xlk129g08ex DC045058 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7979921 DR722506 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8535880 EB479255 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
rxlk129g08ex DC011903 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:5162072 BQ397933 3' X. laevis.S Soares NXEG egg unfertilized egg stage