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Summary Expression Phenotypes Gene Literature (0) GO Terms (1) Nucleotides (253) Proteins (55) Interactants (14) Wiki
XB-GENEPAGE-919921

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for scaf8 - All

Models - Gene (29)
Models - mRNA (38)
mRNAs (13)
ESTs (117)

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g014558 X. tropicalis
NCBI 10.1 XBXL10_1g23225 X. laevis.L
NCBI 10.1 XBXL10_1g25300 X. laevis.S
ENSEMBL 10.0 scaf8 X. tropicalis
JGI 9.1 Xelaev18026831m.g X. laevis.L
JGI 9.1 Xelaev18029068m.g X. laevis.S
Xenbase 9.1 gene8346 X. tropicalis
Xenbase 9.2 gene16304 X. laevis.L
Xenbase 9.2 gene46647 X. laevis.S
ENSEMBL 9.1 scaf8 X. tropicalis
JGI 8.0 Xetrov14023323m.g X. tropicalis
JGI 7.1 Xetro.E01032 X. tropicalis
JGI 7.2 Xelaev16006013m.g X. laevis.L
JGI 6.0 XeXenL6RMv10008083m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000013132 X. tropicalis
JGI 4.1 e_gw1.2.81.1 X. tropicalis
JGI 4.1 e_gw1.2.404.1 X. tropicalis
JGI 4.1 e_gw1.2.82.1 X. tropicalis
JGI 4.1 gw1.2.404.1 X. tropicalis
JGI 4.1 gw1.2.81.1 X. tropicalis
JGI 4.1 gw1.2.82.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_20044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20081 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20082 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20404 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20098 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_20026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000099 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_2000027 X. tropicalis

Models - mRNA (38)

Source Version Model Species
NCBI 10.0 mRNA071978 X. tropicalis
NCBI 10.1 XBmRNA43279 X. laevis.L
NCBI 10.1 XBmRNA47233 X. laevis.S
ENSEMBL 10.0 ENSXETT00000064678 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083431 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082349 X. tropicalis
ENSEMBL 10.0 ENSXETT00000076748 X. tropicalis
ENSEMBL 10.0 ENSXETT00000028751 X. tropicalis
JGI 9.1 Xelaev18026831m X. laevis.L
JGI 9.1 Xelaev18029068m X. laevis.S
Xenbase 9.1 rna26950 X. tropicalis
Xenbase 9.2 rna47614 X. laevis.L
Xenbase 9.2 rna91504 X. laevis.S
ENSEMBL 9.1 ENSXETT00000083431 X. tropicalis
ENSEMBL 9.1 ENSXETT00000028751 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081344 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082349 X. tropicalis
ENSEMBL 9.1 ENSXETT00000064678 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076748 X. tropicalis
JGI 8.0 Xetrov14023323m X. tropicalis
JGI 7.1 Xetro.E01032.1 X. tropicalis
JGI 7.2 Xelaev16006013m X. laevis.L
JGI 6.0 XeXenL6RMv10008083m X. laevis.L
JGI 4.1 e_gw1.2.81.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028751 X. tropicalis
JGI 4.1 e_gw1.2.404.1 X. tropicalis
JGI 4.1 e_gw1.2.82.1 X. tropicalis
JGI 4.1 gw1.2.404.1 X. tropicalis
JGI 4.1 gw1.2.81.1 X. tropicalis
JGI 4.1 gw1.2.82.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_20044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20081 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20082 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20404 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20098 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_20026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000099 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_2000027 X. tropicalis

mRNAs (13)

Clone Accession Species Library Anatomy Stage
IMAGE:7685974 BC122929 X. tropicalis
TGas072g01 CR762148 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7563835 BC158404 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XM_002931527 X. tropicalis
XM_004914646 X. tropicalis
XR_208642 X. tropicalis
XR_004222838 X. tropicalis
XR_004222837 X. tropicalis
XM_031903015 X. tropicalis
IMAGE:6323848 BC089292 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
NM_001095790 X. laevis.L
XM_041564490 X. laevis.S
XM_041564489 X. laevis.S

ESTs (117)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu105f07 AL786249 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
st70p09 DC184163 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8871798 EL714637 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8890498 EL850556 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st113i10 DC195027 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st15e23 DC167174 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st90g24 DC189025 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st92g24 DC189507 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st93g24 DC189737 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st94g24 DC189988 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7547294 CX501224 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7630217 CX369845 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO7602 CX941294 5' X. tropicalis NIH_XGC_tropTe5 testis frog
st89g24 DC188793 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7804009 DR839251 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7563835 CX473511 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574598 CX441463 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543517 CX458601 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545278 CX487797 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7657160 CX828850 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7689023 CX911889 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691657 CX916837 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7719985 CX983426 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7802066 DR836047 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
TGas132o03 AL965501 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
THdA040f18 CR575972 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA028h19 CR583104 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA013d01 BX705702 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA069i01 BX722359 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas047i02 AL646146 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas130g14 AL959258 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas101g10 AL965060 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu124p02 AL788324 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu108c18 AL790571 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu111i17 AL793576 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu090h10 AL800802 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA018g09 BX703008 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu030m20 AL656581 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu047c17 AL658503 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu036o06 AL661669 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu062e01 AL674164 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas060p02 AL682190 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas057e20 AL682998 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas072g01 AL773971 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu064g07 AL778362 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu083h19 AL785147 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
rst93g24 DC159703 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst94g24 DC159963 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst96g24 DC160442 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8871798 EL714636 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8890498 EL850557 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst113i10 DC165481 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst89g24 DC158693 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst90g24 DC158944 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst92g24 DC159443 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO7602 CX941293 3' X. tropicalis NIH_XGC_tropTe5 testis frog
rst19h23 DC138322 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst15e23 DC137109 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst16h23 DC137469 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst17h23 DC137755 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst18h23 DC138030 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7804009 DR839250 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7657160 CX828849 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7689023 CX911888 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691657 CX916836 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7545278 CX487796 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7630217 CX369844 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7574598 CX441462 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563835 CX473510 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7719985 CX983425 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7802066 DR836046 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
TGas101g10 BX756794 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas132o03 BX758171 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas130g14 BX760783 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas060o03 BX761976 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas101i08 BX762219 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
THdA040f18 CR575973 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA028h19 CR583105 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA018g09 BX703009 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA069i01 BX722360 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas057e20 BX746058 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas060p02 BX747547 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas072g01 BX749479 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu105f07 BX692016 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu083h19 BX692350 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu108a20 BX692698 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115i11 BX694967 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu111i17 BX695616 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu124p02 BX702119 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XL489o13ex BP700193 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk157l24ex DC063363 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl226h17 DC101596 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl316f08 DC127894 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:6934646 CB942735 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL038m23 BJ039881 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL032a20 BJ042552 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL024e05 BJ035797 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL083p01 BJ065715 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0031F10 AW635282 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage