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Summary Expression Phenotypes Gene Literature (0) GO Terms (42) Nucleotides (785) Proteins (107) Interactants (205) Wiki
XB-GENEPAGE-920045

Show:     All X. tropicalis X. laevis

Nucleotide sequences for syncrip - All

RefSeq mRNAs(23)
Models - Gene (32)
Models - mRNA (45)
mRNAs (31)
ESTs (524)

RefSeq mRNAs (23)

Accession Version Protein Name Length Protein Species
XM_002933928 XM_002933928.5 heterogeneous nuclear ribonucleoprotein Q isoform X1 2783 bp XP_002933974 X. tropicalis
XM_004914531 XM_004914531.4 heterogeneous nuclear ribonucleoprotein Q isoform X8 2624 bp XP_004914588 X. tropicalis
XM_012963512 XM_012963512.3 heterogeneous nuclear ribonucleoprotein Q isoform X2 4001 bp XP_012818966 X. tropicalis
XM_012963513 XM_012963513.3 heterogeneous nuclear ribonucleoprotein Q isoform X3 3998 bp XP_012818967 X. tropicalis
XM_012963514 XM_012963514.3 heterogeneous nuclear ribonucleoprotein Q isoform X4 3986 bp XP_012818968 X. tropicalis
XM_012963515 XM_012963515.3 heterogeneous nuclear ribonucleoprotein Q isoform X5 3983 bp XP_012818969 X. tropicalis
XM_012963516 XM_012963516.3 heterogeneous nuclear ribonucleoprotein Q isoform X6 3844 bp XP_012818970 X. tropicalis
XM_012963517 XM_012963517.3 heterogeneous nuclear ribonucleoprotein Q isoform X7 3841 bp XP_012818971 X. tropicalis
NM_001091484 NM_001091484.1 synaptotagmin binding cytoplasmic RNA interacting protein S homeolog 2642 bp NP_001084953 X. laevis.S
XM_018264347 XM_018264347.2 synaptotagmin binding cytoplasmic RNA interacting protein S homeolog isoform X1 3944 bp XP_018119836 X. laevis.S
XM_018264348 XM_018264348.2 synaptotagmin binding cytoplasmic RNA interacting protein S homeolog isoform X2 3941 bp XP_018119837 X. laevis.S
XM_018264349 XM_018264349.2 synaptotagmin binding cytoplasmic RNA interacting protein S homeolog isoform X3 3929 bp XP_018119838 X. laevis.S
XM_018264350 XM_018264350.2 synaptotagmin binding cytoplasmic RNA interacting protein S homeolog isoform X4 3926 bp XP_018119839 X. laevis.S
XM_018264351 XM_018264351.2 synaptotagmin binding cytoplasmic RNA interacting protein S homeolog isoform X5 3788 bp XP_018119840 X. laevis.S
XM_018264352 XM_018264352.2 synaptotagmin binding cytoplasmic RNA interacting protein S homeolog isoform X6 3785 bp XP_018119841 X. laevis.S
XM_018263410 XM_018263410.2 heterogeneous nuclear ribonucleoprotein Q isoform X1 2806 bp XP_018118899 X. laevis.L
XM_018263412 XM_018263412.2 heterogeneous nuclear ribonucleoprotein Q isoform X3 2564 bp XP_018118901 X. laevis.L
XM_018263413 XM_018263413.2 heterogeneous nuclear ribonucleoprotein Q isoform X4 4010 bp XP_018118902 X. laevis.L
XM_018263414 XM_018263414.2 heterogeneous nuclear ribonucleoprotein Q isoform X5 4007 bp XP_018118903 X. laevis.L
XM_018263416 XM_018263416.2 heterogeneous nuclear ribonucleoprotein Q isoform X7 2412 bp XP_018118905 X. laevis.L
XM_018263417 XM_018263417.2 heterogeneous nuclear ribonucleoprotein Q isoform X8 2417 bp XP_018118906 X. laevis.L
XM_041563034 XM_041563034.1 XP_041418968.1 heterogeneous nuclear ribonucleoprotein Q isoform X2 2566 bp XP_041418968 X. laevis.L
XM_041563036 XM_041563036.1 XP_041418970.1 heterogeneous nuclear ribonucleoprotein Q isoform X6 3874 bp XP_041418970 X. laevis.L

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g23574 X. laevis.L
NCBI 10.1 XBXL10_1g25567 X. laevis.S
NCBI 10.0 XBXT10g005928 X. tropicalis
ENSEMBL 10.0 syncrip X. tropicalis
Xenbase 9.2 gene12287 X. laevis.L
Xenbase 9.2 gene16373 X. laevis.S
JGI 9.1 Xelaev18027302m.g X. laevis.L
JGI 9.1 Xelaev18029408m.g X. laevis.S
Xenbase 9.1 gene1994 X. tropicalis
ENSEMBL 9.1 syncrip X. tropicalis
JGI 8.0 Xetrov14022541m.g X. tropicalis
JGI 7.2 Xelaev16006830m.g X. laevis.S
JGI 7.1 Xetro.E00561 X. tropicalis
JGI 6.0 XeXenL6RMv10029296m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000018075 X. tropicalis
JGI 4.1 e_gw1.76.82.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_76000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_76000020 X. tropicalis
JGI 4.1 e_gw1.76.123.1 X. tropicalis
JGI 4.1 e_gw1.76.83.1 X. tropicalis
JGI 4.1 gw1.76.123.1 X. tropicalis
JGI 4.1 gw1.76.82.1 X. tropicalis
JGI 4.1 gw1.76.83.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_760009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_760082 X. tropicalis
JGI 4.1 estExt_Genewise1.C_760083 X. tropicalis
JGI 4.1 estExt_Genewise1.C_760123 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_760003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_760018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_760019 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_760006 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_76000004 X. tropicalis

mRNAs based on gene models(45)

Source Version Model Species
NCBI 10.1 XBmRNA44014 X. laevis.L
NCBI 10.1 XBmRNA47728 X. laevis.S
NCBI 10.0 mRNA029350 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086470 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095508 X. tropicalis
ENSEMBL 10.0 ENSXETT00000074746 X. tropicalis
Xenbase 9.2 rna47817 X. laevis.S
Xenbase 9.2 rna35713 X. laevis.L
ENSEMBL 9.1 ENSXETT00000088042 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095508 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096900 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100349 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078078 X. tropicalis
JGI 9.1 Xelaev18027302m X. laevis.L
Xenbase 9.1 rna6543 X. tropicalis
ENSEMBL 9.1 ENSXETT00000039218 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074746 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076801 X. tropicalis
JGI 9.1 Xelaev18029408m X. laevis.S
ENSEMBL 9.1 ENSXETT00000086470 X. tropicalis
JGI 8.0 Xetrov14022541m X. tropicalis
JGI 7.2 Xelaev16006830m X. laevis.S
JGI 7.1 Xetro.E00561.2 X. tropicalis
JGI 7.1 Xetro.E00561.4 X. tropicalis
JGI 7.1 Xetro.E00561.3 X. tropicalis
JGI 7.1 Xetro.E00561.1 X. tropicalis
JGI 6.0 XeXenL6RMv10029296m X. laevis.S
ENSEMBL 4.1 ENSXETT00000039218 X. tropicalis
JGI 4.1 e_gw1.76.123.1 X. tropicalis
JGI 4.1 e_gw1.76.82.1 X. tropicalis
JGI 4.1 e_gw1.76.83.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_760003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_760018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_760019 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_760006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_760009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_760082 X. tropicalis
JGI 4.1 estExt_Genewise1.C_760083 X. tropicalis
JGI 4.1 estExt_Genewise1.C_760123 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_76000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_76000020 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_76000021 X. tropicalis
JGI 4.1 gw1.76.123.1 X. tropicalis
JGI 4.1 gw1.76.82.1 X. tropicalis
JGI 4.1 gw1.76.83.1 X. tropicalis

mRNAs from cDNA libraries (31)

Clone Accession Species Library Anatomy Stage
IMAGE:8959733 BC161767 X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
XM_002933928 X. tropicalis
XM_004914531 X. tropicalis
XM_012963512 X. tropicalis
XM_012963513 X. tropicalis
XM_012963514 X. tropicalis
XM_012963515 X. tropicalis
XM_012963516 X. tropicalis
XM_012963517 X. tropicalis
IMAGE:3402587 BC070529 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001091484 X. laevis.S
XM_018264347 X. laevis.S
XM_018264348 X. laevis.S
XM_018264349 X. laevis.S
XM_018264350 X. laevis.S
XM_018264351 X. laevis.S
XM_018264352 X. laevis.S
XM_018263410 X. laevis.L
XM_018263412 X. laevis.L
XM_018263413 X. laevis.L
XM_018263414 X. laevis.L
XM_018263416 X. laevis.L
XM_018263417 X. laevis.L
XM_041563034 X. laevis.L
XM_041563036 X. laevis.L
XR_005961284 X. laevis.L
XR_005961285 X. laevis.L
XR_005961286 X. laevis.L
XR_005961287 X. laevis.L
XR_005961288 X. laevis.L
XR_005961289 X. laevis.L

ESTs (524)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8885923 EL842843 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7735539 DN020938 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
TNeu012f20 AL641577 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu011d09 AL639604 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu019l17 AL637628 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu021k02 AL636332 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6986378 CF221922 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6987139 CF221430 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6988299 CF220438 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas046k02 AL650116 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas029k14 AL652458 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas027n06 AL652621 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas039m12 AL654035 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas044g14 AL654505 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas068f24 AL681188 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas062k02 AL683326 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas075d23 AL776898 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas073f23 AL783862 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas112d14 AL962551 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107a21 AL965562 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas091d23 AL965967 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas090o16 AL966116 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas110c11 AL967886 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas108j02 AL970504 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas122l21 AL970725 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas139o20 AL972718 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas089f23 BX763842 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
st29k16 DC171583 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st30k16 DC172159 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st33b09 DC172796 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st3p11 DC174131 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st39g03 DC176536 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st66f15 DC183020 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st69o16 DC183913 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st73d11 DC184758 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st86c23 DC188002 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st87c23 DC188233 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st103c05 DC191292 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st103o11 DC191479 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:6983881 CF152308 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:8922376 EL837031 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7578828 CX417229 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530452 CX419640 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530772 CX420170 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531591 CX421152 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576640 CX422168 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534984 CX429627 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575140 CX430112 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575859 CX431101 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525953 CX443212 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569282 CX457894 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542978 CX458512 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543718 CX459624 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561743 CX465347 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562406 CX466961 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563398 CX468145 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520674 CX468566 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520542 CX468650 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520880 CX468674 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520800 CX468781 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520976 CX469326 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519528 CX479505 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550227 CX486003 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550144 CX486078 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544910 CX486954 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548221 CX490063 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548642 CX491307 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7554271 CX492489 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552221 CX494292 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546992 CX500451 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556079 CX503539 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551559 CX510705 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572232 CX513915 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8918010 EL831579 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8959733 EL658608 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:9018591 EL867035 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8923457 EL678926 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7852455 DT392331 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7802730 DR836689 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8956437 EL659436 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7854415 DT395801 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8892162 EL852725 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7686975 CX908441 5' X. tropicalis NIH_XGC_tropTe4 testis frog
xtbs33I15 CN090285 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7621455 DR898679 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5335532 BQ519961 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6984987 CF150800 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7605183 CX412334 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:4461261 BG884693 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TGas006o04 AL594369 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas011h19 AL630697 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas011l19 AL630720 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas019b22 AL631740 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas016m24 AL631936 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G6a05 AL637321 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G6g08 AL637357 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G8b05 AL637417 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G1c04 AL643618 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas034m19 AL649096 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12