Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (5) GO Terms (16) Nucleotides (94) Proteins (42) Interactants (132) Wiki
XB-GENEPAGE-920112

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hoxd8 - All

RefSeq mRNAs(4)
Models - Gene (30)
Models - mRNA (30)
mRNAs (6)
ESTs (15)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001142117 NM_001142117.1 homeobox protein Hox-D8 1936 bp NP_001135589 X. tropicalis
XM_012970184 XM_012970184.3 homeobox protein Hox-D8 isoform X1 2174 bp XP_012825638 X. tropicalis
NM_001089872 NM_001089872.1 homeobox D8 L homeolog 1930 bp NP_001083341 X. laevis.L
XM_018238886 XM_018238886.2 homeobox protein Hox-D8 2620 bp XP_018094375 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g43527 X. laevis.S
NCBI 10.1 XBXL10_1g40728 X. laevis.L
NCBI 10.0 XBXT10g008225 X. tropicalis
ENSEMBL 10.0 hoxd8 X. tropicalis
Xenbase 9.2 gene6529 X. laevis.S
Xenbase 9.2 gene19639 X. laevis.L
JGI 9.1 Xelaev18047207m.g X. laevis.S
JGI 9.1 Xelaev18044738m.g X. laevis.L
Xenbase 9.1 gene2526 X. tropicalis
ENSEMBL 9.1 hoxd8 X. tropicalis
JGI 8.0 Xetrov14037306m.g X. tropicalis
JGI 7.2 Xelaev16053385m.g X. laevis.L
JGI 7.1 Xetro.I00368 X. tropicalis
JGI 6.0 XeXenL6RMv10024616m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000024424 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_163000007 X. tropicalis
JGI 4.1 gw1.163.144.1 X. tropicalis
JGI 4.1 gw1.163.191.1 X. tropicalis
JGI 4.1 gw1.163.211.1 X. tropicalis
JGI 4.1 e_gw1.163.191.1 X. tropicalis
JGI 4.1 e_gw1.163.211.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1630144 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1630191 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1630211 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1630004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1630007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_163000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_163000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_163000019 X. tropicalis
JGI 4.1 e_gw1.163.144.1 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.1 XBmRNA81899 X. laevis.S
NCBI 10.1 XBmRNA76697 X. laevis.L
ENSEMBL 10.0 ENSXETT00000070016 X. tropicalis
NCBI 10.0 mRNA040901 X. tropicalis
Xenbase 9.2 rna19103 X. laevis.S
Xenbase 9.2 rna57392 X. laevis.L
Xenbase 9.1 rna8408 X. tropicalis
JGI 9.1 Xelaev18047207m X. laevis.S
JGI 9.1 Xelaev18044738m X. laevis.L
ENSEMBL 9.1 ENSXETT00000070016 X. tropicalis
JGI 8.0 Xetrov14037306m X. tropicalis
JGI 7.2 Xelaev16053385m X. laevis.L
JGI 7.1 Xetro.I00368.1 X. tropicalis
JGI 6.0 XeXenL6RMv10024616m X. laevis.L
JGI 4.1 estExt_Genewise1.C_1630144 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1630007 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1630004 X. tropicalis
JGI 4.1 e_gw1.163.211.1 X. tropicalis
JGI 4.1 e_gw1.163.191.1 X. tropicalis
JGI 4.1 e_gw1.163.144.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000047591 X. tropicalis
JGI 4.1 gw1.163.211.1 X. tropicalis
JGI 4.1 gw1.163.191.1 X. tropicalis
JGI 4.1 gw1.163.144.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_163000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_163000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_163000019 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_163000004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1630211 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1630191 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7587889 BC168107 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001142117 X. tropicalis
XM_012970184 X. tropicalis
IMAGE:4031800 BC060408 X. laevis.L
NM_001089872 X. laevis.L
XM_018238886 X. laevis.S

ESTs (15)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7093275 CK654973 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTbA037d19 CR418700 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA027i15 CR419897 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA030j10 CR425340 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7587887 CX314182 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587889 CX314195 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624368 CX401794 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7754144 DN055830 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7587887 CX314181 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA037d19 CR418701 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7624368 CX401793 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA027i15 CR419898 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7754144 DN055829 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
TTbA030j10 CR425341 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:5543040 BQ735747 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32