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Summary Expression Phenotypes Gene Literature (8) GO Terms (38) Nucleotides (209) Proteins (56) Interactants (195) Wiki
XB-GENEPAGE-920161

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rif1 - All

RefSeq mRNAs(8)
Models - Gene (25)
Models - mRNA (36)
mRNAs (9)
ESTs (69)

RefSeq mRNAs (8)

Accession Version Protein Name Length Protein Species
XM_004917657 XM_004917657.4 telomere-associated protein RIF1 isoform X1 8503 bp XP_004917714 X. tropicalis
XM_004917658 XM_004917658.4 telomere-associated protein RIF1 isoform X2 8479 bp XP_004917715 X. tropicalis
XM_018097489 XM_018097489.2 telomere-associated protein RIF1 isoform X1 8488 bp XP_017952978 X. tropicalis
XM_031893905 XM_031893905.1 XP_031749765.1 telomere-associated protein RIF1 isoform X1 8489 bp XP_031749765 X. tropicalis
NM_001280649 NM_001280649.1 replication timing regulatory factor 1 S homeolog 6984 bp NP_001267578 X. laevis.S
XM_018237149 XM_018237149.2 replication timing regulatory factor 1 S homeolog isoform X1 8113 bp XP_018092638 X. laevis.S
XM_018237150 XM_018237150.2 replication timing regulatory factor 1 S homeolog isoform X1 8126 bp XP_018092639 X. laevis.S
XM_041577609 XM_041577609.1 XP_041433543.1 replication timing regulatory factor 1 S homeolog isoform X2 8089 bp XP_041433543 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g43427 X. laevis.S
NCBI 10.0 XBXT10g019715 X. tropicalis
ENSEMBL 10.0 nr5a1 X. tropicalis
Xenbase 9.2 gene11661 X. laevis.S
JGI 9.1 Xelaev18047090m.g X. laevis.S
Xenbase 9.1 gene30130 X. tropicalis
ENSEMBL 9.1 rif1 X. tropicalis
JGI 7.1 Xetro.I00219 X. tropicalis
JGI 6.0 XeXenL6RMv10043006m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000004530 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2270020 X. tropicalis
JGI 4.1 e_gw1.227.123.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_227000019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_227000020 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_227000007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2270007 X. tropicalis
JGI 4.1 e_gw1.227.126.1 X. tropicalis
JGI 4.1 e_gw1.227.77.1 X. tropicalis
JGI 4.1 gw1.227.123.1 X. tropicalis
JGI 4.1 gw1.227.126.1 X. tropicalis
JGI 4.1 gw1.227.77.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2270013 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2270014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2270004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2270019 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.1 XBmRNA81653 X. laevis.S
ENSEMBL 10.0 ENSXETT00000093994 X. tropicalis
NCBI 10.0 mRNA097282 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090742 X. tropicalis
Xenbase 9.2 rna33897 X. laevis.S
ENSEMBL 9.1 ENSXETT00000071969 X. tropicalis
Xenbase 9.1 rna57735 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084181 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090742 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093994 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096773 X. tropicalis
ENSEMBL 9.1 ENSXETT00000009823 X. tropicalis
JGI 9.1 Xelaev18047090m X. laevis.S
ENSEMBL 9.1 ENSXETT00000078922 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088512 X. tropicalis
JGI 7.1 Xetro.I00219.3 X. tropicalis
JGI 7.1 Xetro.I00219.2 X. tropicalis
JGI 7.1 Xetro.I00219.1 X. tropicalis
JGI 6.0 XeXenL6RMv10043006m X. laevis.S
JGI 4.1 estExt_FilteredModels1.C_2270013 X. tropicalis
JGI 4.1 e_gw1.227.126.1 X. tropicalis
JGI 4.1 e_gw1.227.77.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009823 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009824 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2270019 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2270020 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2270007 X. tropicalis
JGI 4.1 e_gw1.227.123.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2270014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2270004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_227000019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_227000020 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_227000007 X. tropicalis
JGI 4.1 gw1.227.123.1 X. tropicalis
JGI 4.1 gw1.227.126.1 X. tropicalis
JGI 4.1 gw1.227.77.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
XM_004917657 X. tropicalis
XM_004917658 X. tropicalis
XM_018097489 X. tropicalis
XM_031893905 X. tropicalis
JN166687 X. laevis.S
NM_001280649 X. laevis.S
XM_018237149 X. laevis.S
XM_018237150 X. laevis.S
XM_041577609 X. laevis.S

ESTs (69)

Clone Accession 5'/3' Species Library Anatomy Stage
XZT3174 CX360960 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7539028 CX451996 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565784 CX482659 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546203 CX488569 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7554251 CX492673 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546055 CX498950 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547350 CX501284 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571893 CX512913 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu065n01 AL777600 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu128d02 AL796343 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA067n08 CR424850 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA019j13 CR571965 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA005g07 CR576321 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA056m06 BX730991 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA064b14 BX733211 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA025h06 BX734815 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7588027 CX314163 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7588095 CX314285 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606931 CX367345 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7616775 CX393293 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7016196 CF522983 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7696105 CX925642 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO8582 CX956224 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8937839 EL640589 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8855133 EL817483 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8855760 EL818334 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8856185 EL818591 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8919007 EL832666 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8921391 EL835579 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9013564 EL859394 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas003c24 AL596015 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas014e20 AL630823 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas026e04 AL647237 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas036p21 AL648178 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas120n15 AL960666 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas142p10 AL963124 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas111l03 AL963983 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas109n12 AL970607 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas104j09 AL971408 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7579125 CX417620 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7588095 CX314284 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8855760 EL818335 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7539028 CX451995 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu065n01 BX686186 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7554251 CX492672 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8856185 EL818592 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TGas104j09 BX754750 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7579125 CX417619 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XL104i07 BJ057591 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL012b08 BJ029314 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
PBX0107C08 AW641516 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4783233 BI449886 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3403264 BG364119 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6634787 BU909193 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5156191 CA790191 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL145l15 BJ094512 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl305h22 DC124705 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl324e17 DC130308 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4930389 BQ731752 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5569816 BQ732710 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5571831 BQ736464 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5542387 BQ737363 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
PBX0085E01 AW639654 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3381672 BF049206 3' X. laevis.S Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
XL012b08 BJ044051 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl324e17 DC094478 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl305h22 DC089784 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL104i07 BJ076058 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl232e15 DC069237 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15