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Summary Expression Phenotypes Gene Literature (13) GO Terms (15) Nucleotides (297) Proteins (71) Interactants (542) Wiki
XB-GENEPAGE-920784

Show:     All X. tropicalis X. laevis

Nucleotide sequences for capn8.1 - All

RefSeq mRNAs(7)
Models - Gene (31)
Models - mRNA (49)
mRNAs (13)
ESTs (180)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001045643 NM_001045643.1 calpain-8 2775 bp NP_001039108 X. tropicalis
XM_031901756 XM_031901756.1 XP_031757616.1 calpain-8 isoform X1 4812 bp XP_031757616 X. tropicalis
NM_001088543 NM_001088543.1 calpain 8 gene 1 L homeolog 2639 bp NP_001082012 X. laevis.L
XM_018261720 XM_018261720.2 calpain 8 gene 1 L homeolog isoform X1 3706 bp XP_018117209 X. laevis.L
XM_018261722 XM_018261722.2 calpain 8 gene 1 L homeolog isoform X2 3694 bp XP_018117211 X. laevis.L
XM_041564236 XM_041564236.1 XP_041420170.1 calpain-8 isoform X1 3411 bp XP_041420170 X. laevis.S
XM_041564237 XM_041564237.1 XP_041420171.1 calpain-8 isoform X2 3424 bp XP_041420171 X. laevis.S

Models - Gene (31)

Source Version Model Species
NCBI 10.1 XBXL10_1g24944 X. laevis.S
NCBI 10.1 XBXL10_1g22670 X. laevis.L
NCBI 10.0 XBXT10g011122 X. tropicalis
ENSEMBL 10.0 capn8.1 X. tropicalis
Xenbase 9.2 gene38688 X. laevis.L
Xenbase 9.2 gene41400 X. laevis.S
JGI 9.1 Xelaev18028652m.g X. laevis.S
JGI 9.1 Xelaev18026269m.g X. laevis.L
Xenbase 9.1 gene28760 X. tropicalis
ENSEMBL 9.1 fras1 X. tropicalis
JGI 7.2 Xelaev16000669m.g X. laevis.L
JGI 7.1 Xetro.E01409 X. tropicalis
JGI 6.0 XeXenL6RMv10004356m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000018607 X. tropicalis
JGI 4.1 C_scaffold_528000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_528000010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_528000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_528000008 X. tropicalis
JGI 4.1 e_gw1.528.100.1 X. tropicalis
JGI 4.1 e_gw1.528.56.1 X. tropicalis
JGI 4.1 e_gw1.528.96.1 X. tropicalis
JGI 4.1 gw1.528.100.1 X. tropicalis
JGI 4.1 gw1.528.56.1 X. tropicalis
JGI 4.1 gw1.528.96.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5280056 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5280096 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5280100 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5280008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5280010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5280003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_528000001 X. tropicalis

mRNAs based on gene models(49)

Source Version Model Species
NCBI 10.1 XBmRNA42257 X. laevis.L
NCBI 10.1 XBmRNA46528 X. laevis.S
ENSEMBL 10.0 ENSXETT00000062202 X. tropicalis
ENSEMBL 10.0 ENSXETT00000088232 X. tropicalis
ENSEMBL 10.0 ENSXETT00000101912 X. tropicalis
ENSEMBL 10.0 ENSXETT00000062268 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105068 X. tropicalis
ENSEMBL 10.0 ENSXETT00000040289 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086733 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085309 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086681 X. tropicalis
NCBI 10.0 mRNA055203 X. tropicalis
ENSEMBL 10.0 ENSXETT00000075909 X. tropicalis
Xenbase 9.2 rna83818 X. laevis.S
Xenbase 9.2 rna79940 X. laevis.L
JGI 9.1 Xelaev18028652m X. laevis.S
ENSEMBL 9.1 ENSXETT00000040289 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062202 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062268 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075909 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085309 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086681 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086733 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088232 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101912 X. tropicalis
ENSEMBL 9.1 ENSXETT00000105068 X. tropicalis
Xenbase 9.1 rna55623 X. tropicalis
JGI 9.1 Xelaev18026269m X. laevis.L
JGI 7.2 Xelaev16000669m X. laevis.L
JGI 7.1 Xetro.E01409.1 X. tropicalis
JGI 6.0 XeXenL6RMv10004356m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_528000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_528000010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_528000003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_528000001 X. tropicalis
JGI 4.1 gw1.528.100.1 X. tropicalis
JGI 4.1 gw1.528.56.1 X. tropicalis
JGI 4.1 gw1.528.96.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5280008 X. tropicalis
JGI 4.1 e_gw1.528.100.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000040289 X. tropicalis
JGI 4.1 e_gw1.528.96.1 X. tropicalis
JGI 4.1 C_scaffold_528000006 X. tropicalis
JGI 4.1 e_gw1.528.56.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5280010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5280056 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5280003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5280096 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5280100 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
IMAGE:7624749 BC135915 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA002d16 CR942413 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
NM_001045643 X. tropicalis
XM_031901756 X. tropicalis
AF212199 X. laevis.L
IMAGE:3399752 BC077421 X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:9041529 BC169895 X. laevis.L
IMAGE:9041531 BC169897 X. laevis.L
NM_001088543 X. laevis.L
XM_018261720 X. laevis.L
XM_018261722 X. laevis.L
XM_041564236 X. laevis.S
XM_041564237 X. laevis.S

ESTs (180)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu099b07 AL791763 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115f04 AL794326 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu109l19 AL794862 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu110c12 AL794987 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu125j19 AL795179 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu101a19 AL805852 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas002k01 AL594962 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas018c20 AL629450 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas034f15 AL649231 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas029m04 AL652465 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7539696 CX452624 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540120 CX461558 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546666 CX500507 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8888984 EL848126 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7584696 CX317585 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA071m06 BX737979 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA039j04 BX736301 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA002d16 BX708376 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA005l17 CR589276 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA036h04 CR582271 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA032c22 CR577960 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr28P10 CN106124 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7624749 CX402100 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7631039 CX371033 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602298 CX365751 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu019c12 AL637673 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu013k03 AL641695 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu023a12 AL642015 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu046l17 AL658902 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu040m12 AL660814 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu041g22 AL662514 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu056h17 AL677237 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu054j19 AL678811 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu074h18 AL776510 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu068d16 AL777376 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu094e02 AL787250 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu144b06 AL789943 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu107n13 AL793417 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7515986 CX747193 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:6994980 CF239718 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6992624 CF241541 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7596239 CX336629 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7592791 CX326579 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA023h11 CR574399 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA031d16 CR442689 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA017h22 CR434803 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st12n09 DC166432 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st16b04 DC167410 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:5335409 BQ520408 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6979801 CF149002 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6976448 CF242327 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA067c19 CR420058 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st46p16 DC178313 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st103a05 DC191270 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st104a05 DC191503 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:6986480 CF221748 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7092617 CK655240 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TNeu068d16 BX683813 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu074h18 BX688198 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu056h17 BX688589 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu107n13 BX692647 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu099b07 BX694879 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu109l19 BX696537 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu110c12 BX698107 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115f04 BX701436 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7602298 CX365750 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA002d16 BX708377 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA023h11 CR574400 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7546666 CX500506 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6992624 CF241542 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
THdA005l17 CR589277 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7596239 CX336628 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8888984 EL848127 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7592791 CX326578 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst12n09 DC136372 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst46p16 DC148036 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7624749 CX402099 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA031d16 CR442690 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
rst16b04 DC137346 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA065o20 CR435345 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
rst103a05 DC161298 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xthr28P10 CN106123 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
rst104a05 DC161527 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA067c19 CR420059 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7584696 CX317584 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA071m06 BX737980 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5335409 BQ520407 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
THdA032c22 CR577961 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7631039 CX371032 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XL038b19 BJ039656 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3516115 BG017010 5' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
xl221c21 DC099965 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl222k22 DC100415 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl240m14 DC105962 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl242f01 DC106442 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl255g08 DC110392 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl258o20 DC111434 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl297g03 DC122276 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl306d18 DC124942 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15