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Summary Expression Phenotypes Gene Literature (23) GO Terms (41) Nucleotides (180) Proteins (63) Interactants (196) Wiki
XB-GENEPAGE-922226

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ddx6 - All

RefSeq mRNAs(12)
Models - Gene (23)
Models - mRNA (30)
mRNAs (17)
ESTs (74)

RefSeq mRNAs (12)

Accession Version Protein Name Length Protein Species
NM_001079116 NM_001079116.1 probable ATP-dependent RNA helicase ddx6 2702 bp NP_001072584 X. tropicalis
NM_001090252 NM_001090252.1 ATP-dependent RNA helicase ddx6 2491 bp NP_001083721 X. laevis.L
XM_018224385 XM_018224385.2 ATP-dependent RNA helicase ddx6 isoform X1 5545 bp XP_018079874 X. laevis.L
XM_018224386 XM_018224386.2 ATP-dependent RNA helicase ddx6 isoform X1 5654 bp XP_018079875 X. laevis.L
XM_018224387 XM_018224387.2 ATP-dependent RNA helicase ddx6 isoform X1 5501 bp XP_018079876 X. laevis.L
XM_018224388 XM_018224388.2 ATP-dependent RNA helicase ddx6 isoform X1 5621 bp XP_018079877 X. laevis.L
XM_018242013 XM_018242013.1 ATP-dependent RNA helicase ddx6-like 5652 bp XP_018097502 X. laevis.S
XM_018242014 XM_018242014.2 ATP-dependent RNA helicase ddx6-like 5451 bp XP_018097503 X. laevis.S
XM_041571356 XM_041571356.1 XP_041427290.1 ATP-dependent RNA helicase ddx6-like 5652 bp XP_041427290 X. laevis.S
XM_041571357 XM_041571357.1 XP_041427291.1 ATP-dependent RNA helicase ddx6-like 5541 bp XP_041427291 X. laevis.S
XM_041571358 XM_041571358.1 XP_041427292.1 ATP-dependent RNA helicase ddx6-like 5648 bp XP_041427292 X. laevis.S
XM_041571359 XM_041571359.1 XP_041427293.1 ATP-dependent RNA helicase ddx6-like 5558 bp XP_041427293 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g31070 X. laevis.L
NCBI 10.1 XBXL10_1g33308 X. laevis.S
NCBI 10.0 XBXT10g015494 X. tropicalis
ENSEMBL 10.0 ddx6 X. tropicalis
Xenbase 9.2 gene14340 X. laevis.S
Xenbase 9.2 gene15717 X. laevis.L
JGI 9.1 Xelaev18004415m.g X. laevis.S
JGI 9.1 Xelaev18035421m.g X. laevis.L
Xenbase 9.1 gene33295 X. tropicalis
ENSEMBL 9.1 ddx6 X. tropicalis
JGI 8.0 Xetrov14030624m.g X. tropicalis
JGI 7.2 Xelaev16038901m.g X. laevis.L
JGI 7.1 Xetro.G01252 X. tropicalis
JGI 6.0 XeXenL6RMv10023234m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000010061 X. tropicalis
JGI 4.1 e_gw1.39.155.1 X. tropicalis
JGI 4.1 gw1.39.245.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_39000001 X. tropicalis
JGI 4.1 gw1.39.155.1 X. tropicalis
JGI 4.1 e_gw1.39.245.1 X. tropicalis
JGI 4.1 e_gw1.39.194.1 X. tropicalis
JGI 4.1 gw1.39.194.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_39000001 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.1 XBmRNA58762 X. laevis.L
NCBI 10.1 XBmRNA62847 X. laevis.S
ENSEMBL 10.0 ENSXETT00000022184 X. tropicalis
NCBI 10.0 mRNA076635 X. tropicalis
Xenbase 9.2 rna41768 X. laevis.S
Xenbase 9.2 rna45884 X. laevis.L
JGI 9.1 Xelaev18004415m X. laevis.S
ENSEMBL 9.1 ENSXETT00000022184 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062447 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089326 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091556 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095125 X. tropicalis
Xenbase 9.1 rna62845 X. tropicalis
JGI 9.1 Xelaev18035421m X. laevis.L
JGI 8.0 Xetrov14030624m X. tropicalis
JGI 7.2 Xelaev16038901m X. laevis.L
JGI 7.1 Xetro.G01252.1 X. tropicalis
JGI 7.1 Xetro.G01252.3 X. tropicalis
JGI 7.1 Xetro.G01252.2 X. tropicalis
JGI 7.1 Xetro.G01252.4 X. tropicalis
JGI 6.0 XeXenL6RMv10023234m X. laevis.L
JGI 4.1 gw1.39.155.1 X. tropicalis
JGI 4.1 gw1.39.245.1 X. tropicalis
JGI 4.1 gw1.39.194.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_39000001 X. tropicalis
JGI 4.1 e_gw1.39.194.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_39000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022184 X. tropicalis
JGI 4.1 e_gw1.39.155.1 X. tropicalis
JGI 4.1 e_gw1.39.245.1 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
IMAGE:7695925 BC122944 X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7559534 BC161499 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
NM_001079116 X. tropicalis
IMAGE:9093609 BC170228 X. laevis.L
IMAGE:9093611 BC170230 X. laevis.L
NM_001090252 X. laevis.L
X92421 X92421 X. laevis.L
XM_018224385 X. laevis.L
XM_018224386 X. laevis.L
XM_018224387 X. laevis.L
XM_018224388 X. laevis.L
XM_018242013 X. laevis.S
XM_018242014 X. laevis.S
XM_041571356 X. laevis.S
XM_041571357 X. laevis.S
XM_041571358 X. laevis.S
XM_041571359 X. laevis.S

ESTs (74)

Clone Accession 5'/3' Species Library Anatomy Stage
THdA033j16 CR579941 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas050g01 AL649664 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
THdA022d01 CR587121 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
st69n06 DC183890 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xthr10C17 CN095479 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas030m06 AL649837 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr10D17 CN095829 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7577275 CX422596 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr04C12 CN117678 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA009d03 BX708925 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7533196 CX434795 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA061p13 BX729565 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XZT13749 CX322276 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT13953 CX322586 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7523379 CX472947 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7790790 CX324374 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598328 CX387950 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632240 CX397948 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas043k05 AL651462 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7651706 CX813677 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7566265 CX483642 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7653585 CX821890 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas082j12 AL776700 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7546216 CX499064 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas140p18 AL963054 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7559534 CX514866 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas099i11 AL964927 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5308974 BQ391260 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8934281 EL635499 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
TNeu019k06 AL637715 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu068i16 AL783351 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu094h08 AL786739 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu126b03 AL795498 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu129k20 AL797837 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu144a13 AL798173 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas097k04 AL970979 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8915754 EL828427 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8925265 EL670848 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7695925 CX924669 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7028829 CF782263 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
THdA013d23 CR563541 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8930440 EL664650 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8915754 EL828428 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TGas082j12 BX750894 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas097k04 BX755254 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas140p18 BX764672 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
rst69n06 DC153706 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7577275 CX422595 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566265 CX483641 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546216 CX499063 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559534 CX514865 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5308974 BQ391259 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu068i16 BX687190 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu129k20 BX698586 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu126b03 BX702667 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA013d23 CR563542 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA033j16 CR579942 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr10C17 CN095478 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr10D17 CN095828 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr04C12 CN117677 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA009d03 BX708926 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7790790 CX324373 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7651706 CX813676 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7653585 CX821889 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7695925 CX924668 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8934281 EL635498 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8930440 EL664649 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8925265 EL670847 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGp998M038393 BX849851 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3436970 BF613393 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3549850 BG578479 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL150m18 BJ095581 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL004b14 BJ030420 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL150m18 BJ099477 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5