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Summary Expression Phenotypes Gene Literature (106) GO Terms (36) Nucleotides (413) Proteins (48) Interactants (977) Wiki
XB-GENEPAGE-923210

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pou5f3 - All

RefSeq mRNAs(3)
Models - Gene (29)
Models - mRNA (31)
mRNAs (17)
ESTs (328)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001285474 NM_001285474.1 POU class 5 homeobox 3, gene 1 2454 bp NP_001272403 X. tropicalis
NM_001087873 NM_001087873.1 POU class 5 homeobox 3, gene 1 2418 bp NP_001081342 X. laevis.L
XM_018232531 XM_018232531.2 POU domain, class 5, transcription factor 1.2-like 2998 bp XP_018088020 X. laevis.S

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g37505 X. laevis.S
NCBI 10.1 XBXL10_1g34226 X. laevis.L
NCBI 10.0 XBXT10g010284 X. tropicalis
ENSEMBL 10.0 pou5f3.3 X. tropicalis
Xenbase 9.2 gene7197 X. laevis.L
Xenbase 9.2 gene6701 X. laevis.S
JGI 9.1 Xelaev18038233m.g X. laevis.L
JGI 9.1 Xelaev18041475m.g X. laevis.S
Xenbase 9.1 gene19970 X. tropicalis
ENSEMBL 9.1 pou5f3.1 X. tropicalis
JGI 7.1 Xetro.K04899 X. tropicalis
ENSEMBL 4.1 ENSXETG00000026475 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8860003 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_8860002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_886000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_886000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_886000003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_8860001 X. tropicalis
JGI 4.1 e_gw1.886.102.1 X. tropicalis
JGI 4.1 e_gw1.886.105.1 X. tropicalis
JGI 4.1 e_gw1.886.110.1 X. tropicalis
JGI 4.1 gw1.886.102.1 X. tropicalis
JGI 4.1 gw1.886.105.1 X. tropicalis
JGI 4.1 gw1.886.110.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_8860002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8860102 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8860105 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8860110 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8860002 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA64559 X. laevis.L
NCBI 10.1 XBmRNA70798 X. laevis.S
NCBI 10.0 mRNA050851 X. tropicalis
ENSEMBL 10.0 ENSXETT00000116711 X. tropicalis
ENSEMBL 10.0 ENSXETT00000008659 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108553 X. tropicalis
Xenbase 9.2 rna19623 X. laevis.S
Xenbase 9.2 rna21000 X. laevis.L
JGI 9.1 Xelaev18041475m X. laevis.S
ENSEMBL 9.1 ENSXETT00000008659 X. tropicalis
Xenbase 9.1 rna41473 X. tropicalis
JGI 9.1 Xelaev18038233m X. laevis.L
JGI 7.1 Xetro.K04899.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_886000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_886000003 X. tropicalis
JGI 4.1 gw1.886.102.1 X. tropicalis
JGI 4.1 gw1.886.105.1 X. tropicalis
JGI 4.1 gw1.886.110.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8860110 X. tropicalis
JGI 4.1 e_gw1.886.105.1 X. tropicalis
JGI 4.1 e_gw1.886.110.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000008659 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_8860002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8860002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8860003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_8860001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_8860002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8860102 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8860105 X. tropicalis
JGI 4.1 e_gw1.886.102.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_886000002 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
AL956522 X. tropicalis
CF217105 X. tropicalis
CX419491 X. tropicalis
CX443353 X. tropicalis
CX461859 X. tropicalis
CX481588 X. tropicalis
CX487420 X. tropicalis
CX501450 X. tropicalis
NM_001285474 X. tropicalis
IMAGE:9041375 BC169741 X. laevis.L
IMAGE:9041377 BC169743 X. laevis.L
M60077 X. laevis.L
NM_001087873 X. laevis.L
JQ220359 X. laevis.S
M60076 X. laevis.S
U04869 X. laevis.S
XM_018232531 X. laevis.S

ESTs (328)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu075c24 BX683510 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6987064 CF221493 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6988308 CF220429 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:4440767 BG512135 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:4440620 BG512998 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TGas026o16 AL647301 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas027l02 AL647546 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas038p02 AL651864 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas045l03 AL652038 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas043p24 AL655001 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas069n23 AL683612 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas076f15 AL774099 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079m11 AL782578 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas088j13 AL954927 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114n16 AL956522 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas108j07 AL956655 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas108l05 AL956663 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6986644 CF222114 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
st1j13 DC168697 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st20m14 DC169037 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st21k21 DC169291 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st2p20 DC171962 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st36h06 DC173715 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st79g07 DC186352 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st83l19 DC187404 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st94e06 DC189943 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st108e07 DC193973 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7579506 CX418587 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530411 CX419303 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530366 CX419491 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576965 CX422110 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529487 CX426402 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575198 CX429871 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575764 CX430778 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532144 CX432929 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573216 CX437054 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524121 CX438569 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525034 CX439956 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525943 CX443353 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526392 CX443791 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7527332 CX444751 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541897 CX448340 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541828 CX448839 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542529 CX449715 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543633 CX459377 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544095 CX459907 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540785 CX461860 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541009 CX462709 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562993 CX467359 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562912 CX467441 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563060 CX467474 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520969 CX468949 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521384 CX470140 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522937 CX472221 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7523378 CX473273 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564193 CX474343 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564457 CX474832 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564880 CX475741 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535321 CX476006 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520151 CX480457 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565243 CX481589 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565492 CX482619 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544509 CX486227 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545175 CX487420 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553569 CX491930 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557612 CX496402 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559283 CX498687 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7554911 CX501451 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556262 CX504452 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556794 CX505150 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557198 CX505608 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557730 CX506306 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559559 CX514388 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559685 CX514598 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6976962 CF223219 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu100i18 AL801908 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu081n04 AL800662 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu132m14 AL800429 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu075c24 AL782309 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077a04 AL777831 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu053o05 AL675599 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu061e20 AL673999 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu039j06 AL660878 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu032j04 AL655919 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu002j03 AL640289 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu019b03 AL636542 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6995063 CF239606 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5383415 BQ395687 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6991054 CF272129 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6981331 CF222547 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6981331 CF222546 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6986582 CF222199 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas123i17 AL957047 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas113e21 AL958763 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas095m11 AL962427 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas092f15 AL966038 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas124d16 AL972064 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5307237 BQ388844 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5308556 BQ390535 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13