Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (5) GO Terms (18) Nucleotides (72) Proteins (36) Interactants (141) Wiki
XB-GENEPAGE-940005

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cdh16 - All

RefSeq mRNAs(2)
Models - Gene (20)
Models - mRNA (28)
mRNAs (4)
ESTs (11)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
XM_002941993 cadherin-16 3737 bp XP_002942039 X. tropicalis
XM_018258004 XM_018258004.2 cadherin-16 2609 bp XP_018113493 X. laevis.L

Models - Gene (20)

Source Version Model Species
NCBI 10.1 XBXL10_1g18821 X. laevis.L
NCBI 10.0 XBXT10g010807 X. tropicalis
ENSEMBL 10.0 cdh16 X. tropicalis
Xenbase 9.2 gene17063 X. laevis.L
JGI 9.1 Xelaev18022711m.g X. laevis.L
Xenbase 9.1 gene3984 X. tropicalis
ENSEMBL 9.1 cdh16 X. tropicalis
JGI 7.2 Xelaev16080787m.g X. laevis.L
JGI 7.1 Xetro.D00705 X. tropicalis
JGI 6.0 XeXenL6RMv10016881m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000017410 X. tropicalis
JGI 4.1 gw1.888.7.1 X. tropicalis
JGI 4.1 gw1.888.21.1 X. tropicalis
JGI 4.1 gw1.888.10.1 X. tropicalis
JGI 4.1 e_gw1.888.7.1 X. tropicalis
JGI 4.1 e_gw1.888.21.1 X. tropicalis
JGI 4.1 e_gw1.888.15.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_888000003 X. tropicalis
JGI 4.1 e_gw1.888.10.1 X. tropicalis
JGI 4.1 gw1.888.15.1 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.1 XBmRNA34703 X. laevis.L
ENSEMBL 10.0 ENSXETT00000118251 X. tropicalis
NCBI 10.0 mRNA053544 X. tropicalis
ENSEMBL 10.0 ENSXETT00000055341 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110409 X. tropicalis
ENSEMBL 10.0 ENSXETT00000117732 X. tropicalis
ENSEMBL 10.0 ENSXETT00000117983 X. tropicalis
ENSEMBL 10.0 ENSXETT00000123848 X. tropicalis
Xenbase 9.2 rna49845 X. laevis.L
JGI 9.1 Xelaev18022711m X. laevis.L
Xenbase 9.1 rna13031 X. tropicalis
ENSEMBL 9.1 ENSXETT00000055341 X. tropicalis
JGI 7.2 Xelaev16080787m X. laevis.L
JGI 7.1 Xetro.D00705.1 X. tropicalis
JGI 6.0 XeXenL6RMv10016881m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_888000003 X. tropicalis
JGI 4.1 gw1.888.10.1 X. tropicalis
JGI 4.1 gw1.888.15.1 X. tropicalis
JGI 4.1 gw1.888.21.1 X. tropicalis
JGI 4.1 gw1.888.7.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000055341 X. tropicalis
ENSEMBL 4.1 ENSXETT00000055339 X. tropicalis
ENSEMBL 4.1 ENSXETT00000055338 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037888 X. tropicalis
JGI 4.1 e_gw1.888.7.1 X. tropicalis
JGI 4.1 e_gw1.888.21.1 X. tropicalis
JGI 4.1 e_gw1.888.15.1 X. tropicalis
JGI 4.1 e_gw1.888.10.1 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
IMAGE:7862544 BC125776 X. tropicalis
XM_002941993 X. tropicalis
GQ499200 X. laevis.L
XM_018258004 X. laevis.L

ESTs (11)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas028d08 AL652500 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7543249 CX458726 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu004i09 AL640527 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064m16 AL783796 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu090b09 AL804682 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA010b21 BX705996 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7543249 CX458725 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu090b09 BX691678 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6931324 CB944488 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6879623 CB207244 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6879623 CB561054 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage