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Summary Expression Phenotypes Gene Literature (0) GO Terms (8) Nucleotides (118) Proteins (43) Interactants (28) Wiki
XB-GENEPAGE-940323

Show:     All X. tropicalis X. laevis

Nucleotide sequences for trmt1l - All

RefSeq mRNAs(5)
Models - Gene (23)
Models - mRNA (31)
mRNAs (6)
ESTs (40)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_004913784 XM_004913784.4 TRMT1-like protein isoform X2 3859 bp XP_004913841 X. tropicalis
XM_031901052 XM_031901052.1 XP_031756912.1 TRMT1-like protein isoform X1 3615 bp XP_031756912 X. tropicalis
NM_001096790 NM_001096790.1 tRNA methyltransferase 1 like S homeolog 3772 bp NP_001090259 X. laevis.S
XM_018259779 XM_018259779.2 tRNA methyltransferase 1 like S homeolog isoform X2 4735 bp XP_018115268 X. laevis.S
XM_041591469 XM_041591469.1 XP_041447403.1 tRNA methyltransferase 1 like S homeolog isoform X1 4730 bp XP_041447403 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g21913 X. laevis.S
NCBI 10.0 XBXT10g010594 X. tropicalis
ENSEMBL 10.0 trmt1l X. tropicalis
Xenbase 9.2 gene36387 X. laevis.S
JGI 9.1 Xelaev18025517m.g X. laevis.S
Xenbase 9.1 gene2939 X. tropicalis
ENSEMBL 9.1 trmt1l X. tropicalis
JGI 7.2 Xelaev16030301m.g X. laevis.S
JGI 7.1 Xetro.D01414 X. tropicalis
JGI 6.0 XeXenL6RMv10025920m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000004539 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_19000058 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_190058 X. tropicalis
JGI 4.1 e_gw1.19.185.1 X. tropicalis
JGI 4.1 e_gw1.19.234.1 X. tropicalis
JGI 4.1 e_gw1.19.280.1 X. tropicalis
JGI 4.1 gw1.19.185.1 X. tropicalis
JGI 4.1 gw1.19.280.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_190031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_190185 X. tropicalis
JGI 4.1 estExt_Genewise1.C_190234 X. tropicalis
JGI 4.1 estExt_Genewise1.C_190280 X. tropicalis
JGI 4.1 gw1.19.234.1 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA40697 X. laevis.S
NCBI 10.0 mRNA052393 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066392 X. tropicalis
Xenbase 9.2 rna76694 X. laevis.S
ENSEMBL 9.1 ENSXETT00000089543 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090897 X. tropicalis
ENSEMBL 9.1 ENSXETT00000009854 X. tropicalis
Xenbase 9.1 rna9625 X. tropicalis
JGI 9.1 Xelaev18025517m X. laevis.S
ENSEMBL 9.1 ENSXETT00000066392 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075379 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077890 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090190 X. tropicalis
JGI 7.2 Xelaev16030301m X. laevis.S
JGI 7.1 Xetro.D01414.3 X. tropicalis
JGI 7.1 Xetro.D01414.2 X. tropicalis
JGI 7.1 Xetro.D01414.1 X. tropicalis
JGI 6.0 XeXenL6RMv10025920m X. laevis.S
JGI 4.1 estExt_Genewise1.C_190234 X. tropicalis
JGI 4.1 e_gw1.19.234.1 X. tropicalis
JGI 4.1 e_gw1.19.280.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009854 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_190058 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_190031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_190185 X. tropicalis
JGI 4.1 e_gw1.19.185.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_190280 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_19000058 X. tropicalis
JGI 4.1 gw1.19.185.1 X. tropicalis
JGI 4.1 gw1.19.234.1 X. tropicalis
JGI 4.1 gw1.19.280.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
XM_004913784 X. tropicalis
XM_031901052 X. tropicalis
IMAGE:3401757 BC083042 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XM_041591469 X. laevis.S
XM_018259779 X. laevis.S
NM_001096790 X. laevis.S

ESTs (40)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA029g07 BX723038 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA033d21 BX716088 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu028h05 AL646642 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu059i16 AL675488 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA012k02 CR409819 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA005a23 CR576278 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7702720 CX938577 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7562750 CX467026 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA057p01 BX725938 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA005a23 CR576279 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA033d21 BX716089 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA029g07 BX723039 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7702720 CX938576 3' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas088n19 BX763478 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu059i16 BX684320 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7562750 CX467025 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA012k02 CR409820 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA057p01 BX725939 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:4678696 BI349626 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3401757 BE679414 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3403269 BG364209 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998A228302 BX843233 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL199e23 BJ621974 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL220b10 BJ627986 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3749383 BF615414 5' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL013a03 BJ029621 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL043k11 BJ038505 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL044k09 BJ040168 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4958878 BM179537 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5537115 BQ731862 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5542714 BQ736115 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3401757 BE575717 3' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL044k09 BJ054556 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL043k11 BJ053078 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL013a03 BJ044340 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL220b10 BJ644266 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL218m22 BJ643934 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4958878 BI478006 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL180d09 BJ633795 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3403269 BG019663 3' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10