Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (12) Nucleotides (119) Proteins (39) Interactants (70) Wiki
XB-GENEPAGE-941030

Show:     All X. tropicalis X. laevis

Nucleotide sequences for mrpl47 - All

RefSeq mRNAs(3)
Models - Gene (27)
Models - mRNA (28)
mRNAs (6)
ESTs (40)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001114063 NM_001114063.2 large ribosomal subunit protein uL29m 960 bp NP_001107535 X. tropicalis
XM_018263678 XM_018263678.2 39S ribosomal protein L47, mitochondrial isoform X1 1077 bp XP_018119167 X. laevis.L
XM_018263679 XM_018263679.2 39S ribosomal protein L47, mitochondrial isoform X2 1065 bp XP_018119168 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g23965 X. laevis.L
NCBI 10.0 XBXT10g003281 X. tropicalis
ENSEMBL 10.0 mrpl47 X. tropicalis
Xenbase 9.2 gene1915 X. laevis.L
JGI 9.1 Xelaev18027556m.g X. laevis.L
Xenbase 9.1 gene3301 X. tropicalis
ENSEMBL 9.1 mrpl47 X. tropicalis
JGI 7.1 Xetro.E00213 X. tropicalis
JGI 6.0 XeXenL6RMv10034070m.g X. laevis.L
JGI 4.1 estExt_Genewise1.C_30165 X. tropicalis
JGI 4.1 estExt_Genewise1.C_30171 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_30033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_30161 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_3000033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_30052 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_3000163 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_3000164 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_3000054 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_30162 X. tropicalis
JGI 4.1 e_gw1.3.164.1 X. tropicalis
JGI 4.1 e_gw1.3.165.1 X. tropicalis
JGI 4.1 e_gw1.3.171.1 X. tropicalis
JGI 4.1 gw1.3.164.1 X. tropicalis
JGI 4.1 gw1.3.165.1 X. tropicalis
JGI 4.1 gw1.3.171.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_30102 X. tropicalis
JGI 4.1 estExt_Genewise1.C_30164 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.1 XBmRNA44823 X. laevis.L
ENSEMBL 10.0 ENSXETT00000060758 X. tropicalis
NCBI 10.0 mRNA016678 X. tropicalis
ENSEMBL 10.0 ENSXETT00000122715 X. tropicalis
Xenbase 9.2 rna5576 X. laevis.L
Xenbase 9.1 rna10811 X. tropicalis
ENSEMBL 9.1 ENSXETT00000060758 X. tropicalis
JGI 9.1 Xelaev18027556m X. laevis.L
JGI 7.1 Xetro.E00213.1 X. tropicalis
JGI 6.0 XeXenL6RMv10034070m X. laevis.L
JGI 4.1 estExt_Genewise1.C_30171 X. tropicalis
JGI 4.1 e_gw1.3.164.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_3000163 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_3000164 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_3000054 X. tropicalis
JGI 4.1 gw1.3.164.1 X. tropicalis
JGI 4.1 gw1.3.165.1 X. tropicalis
JGI 4.1 gw1.3.171.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_3000033 X. tropicalis
JGI 4.1 e_gw1.3.165.1 X. tropicalis
JGI 4.1 e_gw1.3.171.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_30033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_30161 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_30162 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_30052 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_30102 X. tropicalis
JGI 4.1 estExt_Genewise1.C_30164 X. tropicalis
JGI 4.1 estExt_Genewise1.C_30165 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
CN108185 X. tropicalis
CX742176 X. tropicalis
EL854956 X. tropicalis
NM_001114063 X. tropicalis
XM_018263678 X. laevis.L
XM_018263679 X. laevis.L

ESTs (40)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9010564 EL854956 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7513040 CX742176 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7532383 CX432628 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572617 CX435256 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu041a12 AL662477 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA004f09 CR409566 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA074g16 BX736200 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7617970 CX362517 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605355 CX412214 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620980 DR898551 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs26N10 CN086267 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7707138 CX959472 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8934099 EL635016 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
xthr31O14 CN108185 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr36F05 CN111145 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr38B21 CN112338 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA004f09 CR409567 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7513040 CX742175 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
xthr31O14 CN108184 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7534544 CX428901 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532383 CX432627 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs26N10 CN086266 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7572617 CX435255 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr38B21 CN112337 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7707138 CX959471 3' X. tropicalis NIH_XGC_tropTe5 testis frog
xthr36F05 CN111144 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7620980 CX341618 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8934099 EL635015 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7608358 CX409407 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605355 CX412213 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7617970 DR897584 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst80n02 DC156627 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xlk102n04ex DC036524 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGp998A0312240 BX846669 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4678698 BI349627 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3381576 BF047200 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:6931682 CB941807 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:5541770 BQ733050 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3301224 BE132158 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3301224 BE491170 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage