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Summary Expression Phenotypes Gene Literature (1) GO Terms (9) Nucleotides (195) Proteins (40) Interactants (31) Wiki
XB-GENEPAGE-951780

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hmgxb4 - All

RefSeq mRNAs(4)
Models - Gene (23)
Models - mRNA (26)
mRNAs (10)
ESTs (93)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001030384 NM_001030384.1 HMG box-containing protein 4 4017 bp NP_001025555 X. tropicalis
XM_012961211 XM_012961211.3 HMG box-containing protein 4 isoform X1 3986 bp XP_012816665 X. tropicalis
XM_012961213 XM_012961213.3 HMG box-containing protein 4 isoform X2 3971 bp XP_012816667 X. tropicalis
NM_001089277 NM_001089277.2 NP_001082746.2 HMG box-containing protein 4 1905 bp NP_001082746 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g22058 X. laevis.S
NCBI 10.0 XBXT10g014100 X. tropicalis
ENSEMBL 10.0 hmgxb4 X. tropicalis
Xenbase 9.2 gene19874 X. laevis.S
JGI 9.1 Xelaev18025687m.g X. laevis.S
Xenbase 9.1 gene5092 X. tropicalis
ENSEMBL 9.1 hmgxb4 X. tropicalis
JGI 8.0 Xetrov14017182m.g X. tropicalis
JGI 7.1 Xetro.D01592 X. tropicalis
JGI 6.0 XeXenL6RMv10040742m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000006340 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_88000019 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_88000007 X. tropicalis
JGI 4.1 e_gw1.88.189.1 X. tropicalis
JGI 4.1 gw1.88.189.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_880012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_880189 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_880007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_880018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_880019 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_880007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_88000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_88000018 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.1 XBmRNA41008 X. laevis.S
ENSEMBL 10.0 ENSXETT00000013886 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105899 X. tropicalis
NCBI 10.0 mRNA069810 X. tropicalis
Xenbase 9.2 rna58033 X. laevis.S
Xenbase 9.1 rna16574 X. tropicalis
JGI 9.1 Xelaev18025687m X. laevis.S
ENSEMBL 9.1 ENSXETT00000013886 X. tropicalis
JGI 8.0 Xetrov14017182m X. tropicalis
JGI 7.1 Xetro.D01592.2 X. tropicalis
JGI 7.1 Xetro.D01592.1 X. tropicalis
JGI 7.1 Xetro.D01592.3 X. tropicalis
JGI 6.0 XeXenL6RMv10040742m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_88000019 X. tropicalis
ENSEMBL 4.1 ENSXETT00000013886 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_880007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_880018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_880019 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_880007 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_880012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_880189 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_88000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_88000018 X. tropicalis
JGI 4.1 e_gw1.88.189.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_88000006 X. tropicalis
JGI 4.1 gw1.88.189.1 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:5336439 BC090595 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TEgg141c05 CR760909 X. tropicalis
NM_001030384 X. tropicalis
XM_012961211 X. tropicalis
XM_012961213 X. tropicalis
IMAGE:9041633 BC169998 X. laevis.S
BX850161 X. laevis.S
CB564622 X. laevis.S
CV074667 X. laevis.S
NM_001089277 X. laevis.S

ESTs (93)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8930797 EL665332 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7577257 CX422804 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7756033 DN058633 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7533347 CX434535 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7669869 CX876167 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7572740 CX435760 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7663350 CX846270 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8868839 EL708696 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
xtbs06A11 CN091979 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs20F11 CN082096 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7789223 DR905095 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7612959 CX405500 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7588626 CX310535 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA073c19 BX732528 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA042e14 BX728288 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA068p10 BX716337 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xthr33M17 CN109127 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
THdA025f19 CR581274 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA051f07 CR436565 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7552213 CX494240 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568329 CX456272 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539383 CX452452 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526799 CX444103 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas040c14 AL651188 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas046o03 AL651975 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas051j24 AL679885 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas051n18 AL679906 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5336439 BQ522013 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:9015596 EL862188 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st2e14 DC171761 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xthr33M17 CN109126 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas051n18 BX746462 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas051j24 BX749080 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7577257 CX422803 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533347 CX434534 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572740 CX435759 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539383 CX452451 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552213 CX494239 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568329 DR889610 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA051f07 CR436566 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:5336439 BQ522012 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTpA068p10 BX716338 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA042e14 BX728289 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA073c19 BX732529 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7588626 CX310534 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7789223 CX334586 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7612959 CX405499 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs06A11 CN091978 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8868839 EL708695 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7663350 CX846269 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7669869 CX876166 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7756033 DN058632 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8930797 EL665331 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:9015596 EL862189 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
PBX0039G02 AW635900 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6873058 CB198117 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6874016 CB199004 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
XL171o20 BJ615411 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL160m17 BJ612805 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3378541 BE491366 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XL431j04ex BP679338 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL484o22ex BP698493 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk118b07ex DC041357 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl254n20 DC110231 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl325d15 DC130599 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7298022 CO386727 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6869136 CA984821 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:4202623 BG555542 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3378455 BE491319 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6867622 CA981225 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGp998I0111403 BX850161 5' X. laevis.S Soares NXEG egg unfertilized egg stage
PBX0128E02 AW643412 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5162568 BQ398163 5' X. laevis.S Soares NXEG egg unfertilized egg stage
IMAGE:3300886 BE131882 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL053m11 BJ069575 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0163C11 AW646382 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4678196 BI477840 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0047E11 AW636511 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0135D02 AW644003 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4678069 BI314806 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6878951 CB206848 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:4202623 BG161552 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL160m17 BJ629287 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk118b07ex DC008464 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:4678069 BI443121 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6874016 CB564622 3' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
XL425o06ex BP714594 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6878951 CB561909 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL431j04ex BP716225 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:5162568 BQ398162 3' X. laevis.S Soares NXEG egg unfertilized egg stage
XL484o22ex BP731551 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL171o20 BJ632045 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6873058 CB563711 3' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62