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Summary Expression Phenotypes Gene Literature (1) GO Terms (13) Nucleotides (109) Proteins (44) Interactants (110) Wiki
XB-GENEPAGE-952127

Show:     All X. tropicalis X. laevis

Nucleotide sequences for vps50 - All

RefSeq mRNAs(5)
Models - Gene (24)
Models - mRNA (33)
mRNAs (9)
ESTs (21)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001016219 NM_001016219.3 syndetin isoform 2 1206 bp NP_001016219 X. tropicalis
NM_001114244 NM_001114244.2 syndetin isoform 1 4203 bp NP_001107716 X. tropicalis
XM_018267313 XM_018267313.2 syndetin isoform X2 4728 bp XP_018122802 X. laevis.L
XM_018267314 XM_018267314.2 syndetin isoform X1 4685 bp XP_018122803 X. laevis.L
XM_041567471 XM_041567471.1 XP_041423405.1 uncharacterized protein LOC121395011 1526 bp XP_041423405 X. laevis.S

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g26943 X. laevis.L
NCBI 10.0 XBXT10g014827 X. tropicalis
NCBI 10.1 XBXL10_1g28865 X. laevis.S
ENSEMBL 10.0 vps50 X. tropicalis
Xenbase 9.2 gene19006 X. laevis.L
JGI 9.1 Xelaev18030865m.g X. laevis.L
Xenbase 9.1 gene18710 X. tropicalis
ENSEMBL 9.1 vps50 X. tropicalis
JGI 7.1 Xetro.F01474 X. tropicalis
JGI 6.0 XeXenL6RMv10004258m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000027389 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_104000051 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_104000017 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_104000007 X. tropicalis
JGI 4.1 e_gw1.104.1.1 X. tropicalis
JGI 4.1 e_gw1.104.141.1 X. tropicalis
JGI 4.1 e_gw1.104.43.1 X. tropicalis
JGI 4.1 e_gw1.104.87.1 X. tropicalis
JGI 4.1 e_gw1.104.93.1 X. tropicalis
JGI 4.1 gw1.104.141.1 X. tropicalis
JGI 4.1 gw1.104.43.1 X. tropicalis
JGI 4.1 gw1.104.87.1 X. tropicalis
JGI 4.1 gw1.104.93.1 X. tropicalis
JGI 4.1 gw1.104.1.1 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA50461 X. laevis.L
NCBI 10.1 XBmRNA54305 X. laevis.S
NCBI 10.0 mRNA073283 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094283 X. tropicalis
ENSEMBL 10.0 ENSXETT00000030392 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096160 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084847 X. tropicalis
Xenbase 9.2 rna55479 X. laevis.L
ENSEMBL 9.1 ENSXETT00000104894 X. tropicalis
ENSEMBL 9.1 ENSXETT00000030392 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071665 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084847 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093984 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094283 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096160 X. tropicalis
Xenbase 9.1 rna39536 X. tropicalis
JGI 9.1 Xelaev18030865m X. laevis.L
JGI 7.1 Xetro.F01474.1 X. tropicalis
JGI 6.0 XeXenL6RMv10004258m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_104000007 X. tropicalis
JGI 4.1 gw1.104.1.1 X. tropicalis
JGI 4.1 gw1.104.141.1 X. tropicalis
JGI 4.1 gw1.104.43.1 X. tropicalis
JGI 4.1 gw1.104.87.1 X. tropicalis
JGI 4.1 gw1.104.93.1 X. tropicalis
JGI 4.1 e_gw1.104.93.1 X. tropicalis
JGI 4.1 e_gw1.104.87.1 X. tropicalis
JGI 4.1 e_gw1.104.43.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000030394 X. tropicalis
JGI 4.1 e_gw1.104.141.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_104000051 X. tropicalis
JGI 4.1 e_gw1.104.1.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_104000017 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:8925508 BC157528 X. tropicalis NICHD_XGC_tropThy1 thymus frog
CF591779 X. tropicalis
TEgg115d05 CR926312 X. tropicalis
CX820712 X. tropicalis
NM_001016219 X. tropicalis
NM_001114244 X. tropicalis
XM_018267313 X. laevis.L
XM_018267314 X. laevis.L
XM_041567471 X. laevis.S

ESTs (21)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8925508 EL671871 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7567461 CX508360 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7652995 CX820712 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7639612 CX385687 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7714161 CX972880 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7618431 CX362955 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7718801 CX981433 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7625032 CX402994 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8932206 EL667539 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7630107 CX369757 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630107 DR900857 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7567461 CX508359 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7639612 CX385686 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625032 CX402993 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618431 DR897668 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7652995 CX820711 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7714161 CX972879 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7718801 CX981432 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8932206 EL667538 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8925508 EL671870 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
PBX0039A07 AW635841 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage