Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (170) Proteins (46) Interactants (1) Wiki
XB-GENEPAGE-952740

Show:     All X. tropicalis X. laevis

Nucleotide sequences for fam107b - All

RefSeq mRNAs(6)
Models - Gene (26)
Models - mRNA (28)
mRNAs (9)
ESTs (65)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001007912 NM_001007912.2 protein FAM107B 1790 bp NP_001007913 X. tropicalis
XM_012958879 XM_012958879.3 protein FAM107B isoform X1 6747 bp XP_012814333 X. tropicalis
XM_018252714 XM_018252714.2 protein FAM107B isoform X1 2176 bp XP_018108203 X. laevis.L
XM_018252716 XM_018252716.2 protein FAM107B isoform X2 2290 bp XP_018108205 X. laevis.L
NM_001093996 NM_001093996.1 uncharacterized protein LOC447289 5916 bp NP_001087465 X. laevis.S
XM_041587653 XM_041587653.1 XP_041443587.1 family with sequence similarity 107 member B S homeolog isoform X1 2501 bp XP_041443587 X. laevis.S

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g16058 X. laevis.S
NCBI 10.1 XBXL10_1g12822 X. laevis.L
NCBI 10.0 XBXT10g015754 X. tropicalis
ENSEMBL 10.0 fam107b X. tropicalis
Xenbase 9.2 gene42196 X. laevis.L
Xenbase 9.2 gene773 X. laevis.S
JGI 9.1 Xelaev18017820m.g X. laevis.L
JGI 9.1 Xelaev18020939m.g X. laevis.S
Xenbase 9.1 gene4565 X. tropicalis
ENSEMBL 9.1 fam107b X. tropicalis
JGI 8.0 Xetrov14014110m.g X. tropicalis
JGI 7.2 Xelaev16044006m.g X. laevis.L
JGI 7.1 Xetro.C02002 X. tropicalis
JGI 6.0 XeXenL6RMv10009234m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000009120 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_138000010 X. tropicalis
JGI 4.1 e_gw1.138.96.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_138000007 X. tropicalis
JGI 4.1 e_gw1.138.12.1 X. tropicalis
JGI 4.1 gw1.138.96.1 X. tropicalis
JGI 4.1 gw1.138.74.1 X. tropicalis
JGI 4.1 gw1.138.12.1 X. tropicalis
JGI 4.1 e_gw1.138.74.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_138000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_138000027 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_138000008 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.1 XBmRNA30059 X. laevis.S
NCBI 10.1 XBmRNA24182 X. laevis.L
ENSEMBL 10.0 ENSXETT00000020001 X. tropicalis
NCBI 10.0 mRNA077951 X. tropicalis
ENSEMBL 10.0 ENSXETT00000113705 X. tropicalis
ENSEMBL 10.0 ENSXETT00000122833 X. tropicalis
Xenbase 9.2 rna84960 X. laevis.L
Xenbase 9.2 rna2255 X. laevis.S
Xenbase 9.1 rna14860 X. tropicalis
JGI 9.1 Xelaev18020939m X. laevis.S
JGI 9.1 Xelaev18017820m X. laevis.L
ENSEMBL 9.1 ENSXETT00000020001 X. tropicalis
JGI 8.0 Xetrov14014110m X. tropicalis
JGI 7.2 Xelaev16044006m X. laevis.L
JGI 7.1 Xetro.C02002.1 X. tropicalis
JGI 6.0 XeXenL6RMv10009234m X. laevis.L
ENSEMBL 4.1 ENSXETT00000020001 X. tropicalis
JGI 4.1 gw1.138.96.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_138000010 X. tropicalis
JGI 4.1 gw1.138.12.1 X. tropicalis
JGI 4.1 gw1.138.74.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_138000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_138000027 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_138000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_138000026 X. tropicalis
JGI 4.1 e_gw1.138.96.1 X. tropicalis
JGI 4.1 e_gw1.138.74.1 X. tropicalis
JGI 4.1 e_gw1.138.12.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:6980573 BC080351 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas111g01 CR848141 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001007912 X. tropicalis
XM_012958879 X. tropicalis
XM_018252714 X. laevis.L
XM_018252716 X. laevis.L
IMAGE:3402993 BC079918 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001093996 X. laevis.S
XM_041587653 X. laevis.S

ESTs (65)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7586211 CX319554 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587067 CX312975 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA044p16 CR587851 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA044p12 CR587847 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA043p07 CR443096 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6980573 CF148121 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7635592 CX339474 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787380 CX329470 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas024h06 AL629844 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas036a12 AL648279 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas045e17 AL650350 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas035g08 AL654204 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas053l21 AL676211 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas111g01 AL963641 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144d21 AL972807 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9020170 EL869516 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8856984 EL820205 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7528548 CX425198 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8927879 EL675729 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7535071 CX429241 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525826 CX443094 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7698095 CX929749 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7535478 CX476403 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7613974 CX390008 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7554034 CX492825 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA043p07 CR443097 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas053l21 BX748076 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144d21 BX761608 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7535071 CX429240 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535478 CX476402 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7554034 CX492824 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA044p12 CR587848 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA044p16 CR587852 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7587067 CX312974 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7586211 CX319553 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613974 DR896379 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7698095 CX929748 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8927879 EL675728 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8856984 EL820206 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9020170 EL869517 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
PBX0047D01 AW636491 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl243j04 DC106827 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL149a01 BJ095210 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL183g15 BJ618046 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL067p04 BJ061092 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL077l19 BJ063903 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL449h15ex BP685519 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk113g24ex DC039898 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL030h02 BJ034671 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL023e18 BJ035496 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3201436 AW766115 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
xl310f09 DC126131 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl272o07 DC115558 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3402993 BG364793 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL184g15 BJ618296 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl310f09 DC091098 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL023e18 BJ050115 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL067p04 BJ079294 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl272o07 DC080630 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3402993 BG020689 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
rxl243j04 DC072448 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL183g15 BJ634581 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL149a01 BJ099067 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk113g24ex DC006979 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL077l19 BJ082027 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25