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Summary Expression Phenotypes Gene Literature (7) GO Terms (35) Nucleotides (184) Proteins (82) Interactants (151) Wiki
XB-GENEPAGE-954250

Show:     All X. tropicalis X. laevis

Nucleotide sequences for nin - Xenopus tropicalis

RefSeq mRNAs(5)
Models - Gene (23)
Models - mRNA (43)
mRNAs (6)
ESTs (37)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_002936591 XM_002936591.5 ninein isoform X1 7525 bp XP_002936637 X. tropicalis
XM_004917167 XM_004917167.3 ninein isoform X3 6771 bp XP_004917224 X. tropicalis
XM_004917168 XM_004917168.4 ninein isoform X5 5532 bp XP_004917225 X. tropicalis
XM_018096700 XM_018096700.2 ninein isoform X4 6287 bp XP_017952189 X. tropicalis
XM_031892105 XM_031892105.1 XP_031747965.1 ninein isoform X2 6762 bp XP_031747965 X. tropicalis

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g000894 X. tropicalis
ENSEMBL 10.0 nin X. tropicalis
Xenbase 9.1 gene33338 X. tropicalis
ENSEMBL 9.1 nin X. tropicalis
JGI 8.0 Xetrov14034867m.g X. tropicalis
JGI 7.1 Xetro.H01484 X. tropicalis
ENSEMBL 4.1 ENSXETG00000016467 X. tropicalis
JGI 4.1 gw1.222.15.1 X. tropicalis
JGI 4.1 gw1.222.16.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2220025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_222000043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2220016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2220101 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2220043 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2220014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_222000014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2220015 X. tropicalis
JGI 4.1 e_gw1.222.101.1 X. tropicalis
JGI 4.1 e_gw1.222.130.1 X. tropicalis
JGI 4.1 e_gw1.222.15.1 X. tropicalis
JGI 4.1 e_gw1.222.16.1 X. tropicalis
JGI 4.1 gw1.222.101.1 X. tropicalis
JGI 4.1 gw1.222.130.1 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000035942 X. tropicalis
ENSEMBL 10.0 ENSXETT00000116072 X. tropicalis
ENSEMBL 10.0 ENSXETT00000068989 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096072 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092323 X. tropicalis
ENSEMBL 10.0 ENSXETT00000035931 X. tropicalis
NCBI 10.0 mRNA004488 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084343 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078719 X. tropicalis
ENSEMBL 10.0 ENSXETT00000074070 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074070 X. tropicalis
ENSEMBL 9.1 ENSXETT00000035931 X. tropicalis
ENSEMBL 9.1 ENSXETT00000035942 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068989 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078719 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084343 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092323 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096072 X. tropicalis
Xenbase 9.1 rna62908 X. tropicalis
JGI 8.0 Xetrov14034867m X. tropicalis
JGI 7.1 Xetro.H01484.1 X. tropicalis
JGI 7.1 Xetro.H01484.2 X. tropicalis
JGI 4.1 e_gw1.222.15.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2220043 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2220014 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2220025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2220015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2220016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2220101 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_222000043 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_222000014 X. tropicalis
JGI 4.1 gw1.222.101.1 X. tropicalis
JGI 4.1 gw1.222.130.1 X. tropicalis
JGI 4.1 gw1.222.15.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052805 X. tropicalis
JGI 4.1 gw1.222.16.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035942 X. tropicalis
JGI 4.1 e_gw1.222.101.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035940 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035937 X. tropicalis
JGI 4.1 e_gw1.222.130.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035931 X. tropicalis
JGI 4.1 e_gw1.222.16.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7678861 BC125744 X. tropicalis
XM_002936591 X. tropicalis
XM_004917167 X. tropicalis
XM_004917168 X. tropicalis
XM_018096700 X. tropicalis
XM_031892105 X. tropicalis

ESTs (37)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7530964 CX420803 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs13F10 CN077700 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7555550 CX503202 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7671899 CX880300 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA070a07 CR449633 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7686532 CX907995 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas032m09 AL648363 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7687258 CX909453 5' X. tropicalis NIH_XGC_tropTe4 testis frog
THdA024l14 CR578678 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7699063 CX931221 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7708449 CX961699 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8853289 EL814972 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7520874 CX468634 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8856966 EL820094 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8884632 EL840814 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas014j16 AL630931 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr19P17 CN101747 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA033o16 BX731955 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7551922 CX493888 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7587888 CX314473 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587890 CX314483 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8884632 EL840815 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7530964 CX420802 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520874 CX468633 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551922 CX493887 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555550 CX503201 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA070a07 CR449634 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA024l14 CR578679 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr19P17 CN101746 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7587888 CX314472 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs13F10 CN077699 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7671899 CX880299 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7686532 CX907994 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687258 CX909452 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7699063 CX931220 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8853289 EL814973 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:4463378 BG886034 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12