Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (14) Nucleotides (263) Proteins (48) Interactants (90) Wiki
XB-GENEPAGE-954562

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cdc40 - All

RefSeq mRNAs(4)
Models - Gene (26)
Models - mRNA (33)
mRNAs (6)
ESTs (131)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001011457 NM_001011457.1 pre-mRNA-processing factor 17 2795 bp NP_001011457 X. tropicalis
NM_001094228 NM_001094228.1 cell division cycle 40 S homeolog 2320 bp NP_001087697 X. laevis.S
XM_018263308 XM_018263308.2 pre-mRNA-processing factor 17 isoform X1 2851 bp XP_018118797 X. laevis.L
XM_018263309 XM_018263309.2 pre-mRNA-processing factor 17 isoform X2 2738 bp XP_018118798 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g25492 X. laevis.S
NCBI 10.1 XBXL10_1g23486 X. laevis.L
NCBI 10.0 XBXT10g001737 X. tropicalis
ENSEMBL 10.0 cdc40 X. tropicalis
Xenbase 9.2 gene8989 X. laevis.L
Xenbase 9.2 gene6161 X. laevis.S
JGI 9.1 Xelaev18027192m.g X. laevis.L
JGI 9.1 Xelaev18029279m.g X. laevis.S
Xenbase 9.1 gene25972 X. tropicalis
ENSEMBL 9.1 cdc40 X. tropicalis
JGI 8.0 Xetrov14022793m.g X. tropicalis
JGI 7.1 Xetro.E00674 X. tropicalis
JGI 6.0 XeXenL6RMv10020803m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000021312 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_250000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_250000001 X. tropicalis
JGI 4.1 gw1.250.49.1 X. tropicalis
JGI 4.1 gw1.250.45.1 X. tropicalis
JGI 4.1 gw1.250.39.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_250000002 X. tropicalis
JGI 4.1 gw1.250.11.1 X. tropicalis
JGI 4.1 e_gw1.250.49.1 X. tropicalis
JGI 4.1 e_gw1.250.45.1 X. tropicalis
JGI 4.1 e_gw1.250.39.1 X. tropicalis
JGI 4.1 e_gw1.250.11.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_250000002 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA47588 X. laevis.S
NCBI 10.1 XBmRNA43842 X. laevis.L
ENSEMBL 10.0 ENSXETT00000081677 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080245 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067890 X. tropicalis
ENSEMBL 10.0 ENSXETT00000046098 X. tropicalis
NCBI 10.0 mRNA008731 X. tropicalis
Xenbase 9.2 rna26173 X. laevis.L
Xenbase 9.2 rna18000 X. laevis.S
Xenbase 9.1 rna51157 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081677 X. tropicalis
JGI 9.1 Xelaev18029279m X. laevis.S
JGI 9.1 Xelaev18027192m X. laevis.L
ENSEMBL 9.1 ENSXETT00000046098 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067890 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080245 X. tropicalis
JGI 8.0 Xetrov14022793m X. tropicalis
JGI 7.1 Xetro.E00674.1 X. tropicalis
JGI 7.1 Xetro.E00674.2 X. tropicalis
JGI 6.0 XeXenL6RMv10020803m X. laevis.S
JGI 4.1 fgenesh1_pm.C_scaffold_250000002 X. tropicalis
JGI 4.1 e_gw1.250.39.1 X. tropicalis
JGI 4.1 e_gw1.250.45.1 X. tropicalis
JGI 4.1 e_gw1.250.49.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000046098 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_250000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_250000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_250000003 X. tropicalis
JGI 4.1 e_gw1.250.11.1 X. tropicalis
JGI 4.1 gw1.250.11.1 X. tropicalis
JGI 4.1 gw1.250.39.1 X. tropicalis
JGI 4.1 gw1.250.45.1 X. tropicalis
JGI 4.1 gw1.250.49.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:6988194 BC088565 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
NM_001011457 X. tropicalis
IMAGE:6865165 BC081103 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001094228 X. laevis.S
XM_018263308 X. laevis.L
XM_018263309 X. laevis.L

ESTs (131)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7712216 CX969866 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7693529 CX920385 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7579713 CX418693 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528292 CX425336 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7689762 CX913796 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7573337 CX436566 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7687426 CX909281 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7538331 CX447544 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7652821 CX820481 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7631745 CX397025 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618730 CX346002 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA030b22 BX718190 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA005o15 CR562759 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA003d21 CR562534 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu130b13 AL802765 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu038b16 AL661339 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu025l04 AL644099 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu027b15 AL641061 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu016g19 AL636144 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6988194 CF220527 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5385078 BQ392962 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7553147 CX495727 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545425 CX487494 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521798 CX470678 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561392 CX464918 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540117 CX461212 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas005p17 AL595537 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas043d01 AL651498 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas061m09 AL680183 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128b20 AL961465 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128a09 AL965188 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas126p15 AL972197 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8962092 EL661147 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:9019981 EL869243 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9018835 EL867615 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8914879 EL837723 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TGas061m09 BX748712 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas090d23 BX751610 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128b20 BX758525 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128a09 BX761141 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas074b21 BX762508 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7579713 CX418692 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573337 CX436565 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538331 CX447543 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561392 CX464917 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521798 CX470677 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553147 CX495726 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu130b13 BX700433 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu125c02 BX701237 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA003d21 CR562535 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA005o15 CR562760 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA030b22 BX718191 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7618730 CX346001 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7631745 DR901213 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7652821 CX820480 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7687426 CX909280 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689762 CX913795 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693529 CX920384 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7712216 CX969865 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8914879 EL837724 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8883532 EL839366 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9018835 EL867616 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9019981 EL869244 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XL011p02 BJ029270 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
BE026055 BE026055 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
AW872149 AW872149 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0145G09 AW644906 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6877838 CB179938 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL016p07 BJ032533 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL025b06 BJ033859 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
AW872080 AW872080 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0046C11 AW636407 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL018o18 BJ036248 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL044n13 BJ040236 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL047f13 BJ040709 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL185e11 BJ618491 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xlk54c17ex DC033786 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk57m19ex DC034940 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL208j22 BJ624472 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL080k17 BJ064768 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL203d04 BJ623042 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL455f06ex BP687780 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL477c10ex BP695318 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL407j22ex BP696503 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL489f16ex BP700003 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk69g15ex DC057226 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk6l17ex DC057640 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl263b23 DC112682 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL144m22 BJ094216 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
BG410149 BG410149 5' X. laevis.S Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
IMAGE:6865165 CA988391 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6636130 BU910336 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6635937 BU910168 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6326718 CA974205 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XL107g13 BJ068672 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6632997 BU907734 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5278849 BQ398901 5' X. laevis.S Soares NXEG egg unfertilized egg stage
IMAGE:6632884 BU907650 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
xl267d15 DC113922 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15