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Summary Expression Phenotypes Gene Literature (0) GO Terms (14) Nucleotides (100) Proteins (36) Interactants (2) Wiki
XB-GENEPAGE-955001

Show:     All X. tropicalis X. laevis

Nucleotide sequences for smpdl3a - All

RefSeq mRNAs(3)
Models - Gene (18)
Models - mRNA (24)
mRNAs (5)
ESTs (34)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001030447 NM_001030447.2 acid sphingomyelinase-like phosphodiesterase 3a precursor 1549 bp NP_001025618 X. tropicalis
XM_012963075 XM_012963075.3 acid sphingomyelinase-like phosphodiesterase 3a isoform X1 2286 bp XP_012818529 X. tropicalis
XM_018263211 XM_018263211.2 acid sphingomyelinase-like phosphodiesterase 3a 1680 bp XP_018118700 X. laevis.L

Models - Gene (18)

Source Version Model Species
NCBI 10.1 XBXL10_1g23344 X. laevis.L
NCBI 10.0 XBXT10g017559 X. tropicalis
ENSEMBL 10.0 smpdl3a X. tropicalis
Xenbase 9.2 gene17268 X. laevis.L
JGI 9.1 Xelaev18027017m.g X. laevis.L
Xenbase 9.1 gene6117 X. tropicalis
ENSEMBL 9.1 smpdl3a X. tropicalis
JGI 7.1 Xetro.E01068 X. tropicalis
JGI 6.0 XeXenL6RMv10034704m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000023296 X. tropicalis
JGI 4.1 gw1.274.23.1 X. tropicalis
JGI 4.1 gw1.274.20.1 X. tropicalis
JGI 4.1 gw1.274.142.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_274000010 X. tropicalis
JGI 4.1 e_gw1.274.20.1 X. tropicalis
JGI 4.1 e_gw1.274.142.1 X. tropicalis
JGI 4.1 e_gw1.274.23.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_274000044 X. tropicalis

mRNAs based on gene models(24)

Source Version Model Species
NCBI 10.1 XBmRNA43521 X. laevis.L
ENSEMBL 10.0 ENSXETT00000050330 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120525 X. tropicalis
NCBI 10.0 mRNA086684 X. tropicalis
ENSEMBL 10.0 ENSXETT00000050332 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093650 X. tropicalis
Xenbase 9.2 rna50398 X. laevis.L
ENSEMBL 9.1 ENSXETT00000093650 X. tropicalis
Xenbase 9.1 rna19757 X. tropicalis
JGI 9.1 Xelaev18027017m X. laevis.L
ENSEMBL 9.1 ENSXETT00000050330 X. tropicalis
JGI 7.1 Xetro.E01068.1 X. tropicalis
JGI 7.1 Xetro.E01068.3 X. tropicalis
JGI 7.1 Xetro.E01068.2 X. tropicalis
JGI 6.0 XeXenL6RMv10034704m X. laevis.L
JGI 4.1 gw1.274.142.1 X. tropicalis
JGI 4.1 e_gw1.274.20.1 X. tropicalis
JGI 4.1 e_gw1.274.23.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050330 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_274000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_274000044 X. tropicalis
JGI 4.1 e_gw1.274.142.1 X. tropicalis
JGI 4.1 gw1.274.20.1 X. tropicalis
JGI 4.1 gw1.274.23.1 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7024261 BC091078 X. tropicalis
CX939878 X. tropicalis
NM_001030447 X. tropicalis
XM_012963075 X. tropicalis
XM_018263211 X. laevis.L

ESTs (34)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8909940 EL805199 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7532459 CX433422 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA067m07 CR420128 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA068f20 BX716250 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7600623 CX345580 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632751 CX373744 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7646239 CX803560 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7703430 CX939878 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7632751 CX373743 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7703430 CX939877 3' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA067m07 CR420129 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA068f20 BX716251 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7646239 CX803559 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8909940 EL805200 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7532459 CX433421 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
PBX0103D04 AW641192 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl270f18 DC114837 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:5162016 BQ397908 5' X. laevis.L Soares NXEG egg unfertilized egg stage
xl299n21 DC122994 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl305m17 DC124807 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl306m17 DC125108 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl309o16 DC126001 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
PBX0072C05 AW638613 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0097B04 AW640620 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl269f18 DC114549 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl306m17 DC090164 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:6871918 CB564093 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:5162016 BQ397907 3' X. laevis.L Soares NXEG egg unfertilized egg stage
rxl269f18 DC079676 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl270f18 DC079950 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl270n18 DC080081 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl305m17 DC089884 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl306h16 DC090078 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl309o16 DC090977 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15