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Summary Expression Phenotypes Gene Literature (128) GO Terms (126) Nucleotides (82) Proteins (45) Interactants (433) Wiki
XB-GENEPAGE-955553

Show:     All X. tropicalis X. laevis

Nucleotide sequences for bdnf - All

RefSeq mRNAs(8)
Models - Gene (24)
Models - mRNA (27)
mRNAs (13)
ESTs (3)

RefSeq mRNAs (8)

Accession Version Protein Name Length Protein Species
NM_001097298 NM_001097298.1 brain-derived neurotrophic factor precursor 865 bp NP_001090767 X. tropicalis
XM_012960378 XM_012960378.2 brain-derived neurotrophic factor isoform X2 1252 bp XP_012815832 X. tropicalis
XM_031899708 XM_031899708.1 XP_031755568.1 brain-derived neurotrophic factor isoform X1 1071 bp XP_031755568 X. tropicalis
XM_031899709 XM_031899709.1 XP_031755569.1 brain-derived neurotrophic factor isoform X2 1220 bp XP_031755569 X. tropicalis
XM_018259909 XM_018259909.2 brain-derived neurotrophic factor isoform X2 990 bp XP_018115398 X. laevis.S
XM_041560895 XM_041560895.1 XP_041416829.1 brain-derived neurotrophic factor isoform X1 1086 bp XP_041416829 X. laevis.S
NM_001085482 NM_001085482.1 NP_001078951.1 brain-derived neurotrophic factor precursor 6042 bp NP_001078951 X. laevis.L
XM_041589070 XM_041589070.1 XP_041445004.1 brain-derived neurotrophic factor isoform X1 3158 bp XP_041445004 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g20818 X. laevis.S
NCBI 10.1 XBXL10_1g17888 X. laevis.L
NCBI 10.0 XBXT10g007424 X. tropicalis
ENSEMBL 10.0 bdnf X. tropicalis
Xenbase 9.2 gene4716 X. laevis.L
Xenbase 9.2 gene13830 X. laevis.S
JGI 9.1 Xelaev18021983m.g X. laevis.L
JGI 9.1 Xelaev18024383m.g X. laevis.S
Xenbase 9.1 gene6762 X. tropicalis
JGI 7.2 Xelaev16071073m.g X. laevis.S
JGI 7.1 Xetro.D00406 X. tropicalis
JGI 6.0 XeXenL6RMv10048511m.g X. laevis.S
JGI 6.0 XeXenL6RMv10026002m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000004284 X. tropicalis
JGI 4.1 gw1.309.97.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_309000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_309000007 X. tropicalis
JGI 4.1 gw1.309.96.1 X. tropicalis
JGI 4.1 gw1.309.86.1 X. tropicalis
JGI 4.1 e_gw1.309.97.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_309000003 X. tropicalis
JGI 4.1 e_gw1.309.96.1 X. tropicalis
JGI 4.1 e_gw1.309.86.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_309000008 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.1 XBmRNA38362 X. laevis.S
NCBI 10.1 XBmRNA33047 X. laevis.L
NCBI 10.0 mRNA036783 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124182 X. tropicalis
ENSEMBL 10.0 ENSXETT00000009327 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106872 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106914 X. tropicalis
Xenbase 9.2 rna40278 X. laevis.S
Xenbase 9.2 rna13781 X. laevis.L
Xenbase 9.1 rna21833 X. tropicalis
JGI 9.1 Xelaev18021983m X. laevis.L
JGI 9.1 Xelaev18024383m X. laevis.S
JGI 7.2 Xelaev16071073m X. laevis.S
JGI 7.1 Xetro.D00406.1 X. tropicalis
JGI 6.0 XeXenL6RMv10048511m X. laevis.S
JGI 6.0 XeXenL6RMv10026002m X. laevis.L
JGI 4.1 gw1.309.96.1 X. tropicalis
JGI 4.1 e_gw1.309.96.1 X. tropicalis
JGI 4.1 e_gw1.309.97.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009327 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_309000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_309000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_309000008 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_309000003 X. tropicalis
JGI 4.1 gw1.309.86.1 X. tropicalis
JGI 4.1 e_gw1.309.86.1 X. tropicalis
JGI 4.1 gw1.309.97.1 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
IMAGE:7674229 BC157751 X. tropicalis NIH_XGC_tropBrn4 brain frog
EF433430 X. tropicalis
NM_001097298 X. tropicalis
XM_012960378 X. tropicalis
XM_031899708 X. tropicalis
XM_031899709 X. tropicalis
XM_018259909 X. laevis.S
XM_041560895 X. laevis.S
IMAGE:6957795 BC082887 X. laevis.L
EF035623 X. laevis.L
EU363494 X. laevis.L
NM_001085482 X. laevis.L
XM_041589070 X. laevis.L

ESTs (3)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7674229 CX884162 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8944423 EG650841 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:7674229 CX884161 3' X. tropicalis NIH_XGC_tropBrn4 brain frog