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Summary Expression Phenotypes Gene Literature (128) GO Terms (126) Nucleotides (82) Proteins (45) Interactants (433) Wiki
XB-GENEPAGE-955553

Show:     All X. tropicalis X. laevis

Nucleotide sequences for bdnf - Xenopus tropicalis

RefSeq mRNAs(4)
Models - Gene (15)
Models - mRNA (18)
mRNAs (6)
ESTs (3)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001097298 NM_001097298.1 brain-derived neurotrophic factor precursor 865 bp NP_001090767 X. tropicalis
XM_012960378 XM_012960378.2 brain-derived neurotrophic factor isoform X2 1252 bp XP_012815832 X. tropicalis
XM_031899708 XM_031899708.1 XP_031755568.1 brain-derived neurotrophic factor isoform X1 1071 bp XP_031755568 X. tropicalis
XM_031899709 XM_031899709.1 XP_031755569.1 brain-derived neurotrophic factor isoform X2 1220 bp XP_031755569 X. tropicalis

Models - Gene (15)

Source Version Model Species
NCBI 10.0 XBXT10g007424 X. tropicalis
ENSEMBL 10.0 bdnf X. tropicalis
Xenbase 9.1 gene6762 X. tropicalis
JGI 7.1 Xetro.D00406 X. tropicalis
ENSEMBL 4.1 ENSXETG00000004284 X. tropicalis
JGI 4.1 gw1.309.96.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_309000007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_309000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_309000008 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_309000003 X. tropicalis
JGI 4.1 gw1.309.97.1 X. tropicalis
JGI 4.1 e_gw1.309.86.1 X. tropicalis
JGI 4.1 e_gw1.309.96.1 X. tropicalis
JGI 4.1 e_gw1.309.97.1 X. tropicalis
JGI 4.1 gw1.309.86.1 X. tropicalis

mRNAs based on gene models(18)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000124182 X. tropicalis
ENSEMBL 10.0 ENSXETT00000009327 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106872 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106914 X. tropicalis
NCBI 10.0 mRNA036783 X. tropicalis
Xenbase 9.1 rna21833 X. tropicalis
JGI 7.1 Xetro.D00406.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_309000003 X. tropicalis
JGI 4.1 gw1.309.86.1 X. tropicalis
JGI 4.1 gw1.309.96.1 X. tropicalis
JGI 4.1 gw1.309.97.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_309000007 X. tropicalis
JGI 4.1 e_gw1.309.96.1 X. tropicalis
JGI 4.1 e_gw1.309.97.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009327 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_309000002 X. tropicalis
JGI 4.1 e_gw1.309.86.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_309000008 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7674229 BC157751 X. tropicalis NIH_XGC_tropBrn4 brain frog
EF433430 X. tropicalis
NM_001097298 X. tropicalis
XM_012960378 X. tropicalis
XM_031899708 X. tropicalis
XM_031899709 X. tropicalis

ESTs (3)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7674229 CX884162 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8944423 EG650841 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:7674229 CX884161 3' X. tropicalis NIH_XGC_tropBrn4 brain frog