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Summary Expression Phenotypes Gene Literature (0) GO Terms (10) Nucleotides (189) Proteins (109) Interactants (7) Wiki
XB-GENEPAGE-956329

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for synj1 - All

RefSeq mRNAs(29)
Models - Gene (30)
Models - mRNA (54)
mRNAs (30)
ESTs (25)

RefSeq mRNAs (29)

Accession Version name Length Protein Species
XM_031896571 XM_031896571. XP_031752431.1 synaptojanin-1 isoform X7 4091 bp XP_031752431 X. tropicalis
XM_018091404 XM_018091404. synaptojanin-1 isoform X1 6864 bp XP_017946893 X. tropicalis
XM_018091405 XM_018091405. synaptojanin-1 isoform X2 6855 bp XP_017946894 X. tropicalis
XM_018091406 XM_018091406. synaptojanin-1 isoform X3 6839 bp XP_017946895 X. tropicalis
XM_018091407 XM_018091407. synaptojanin-1 isoform X4 6825 bp XP_017946896 X. tropicalis
XM_018091409 XM_018091409. synaptojanin-1 isoform X5 6776 bp XP_017946898 X. tropicalis
XM_004912146 XM_004912146. synaptojanin-1 isoform X1 7015 bp XP_004912203 X. tropicalis
XM_031896570 XM_031896570. XP_031752430.1 synaptojanin-1 isoform X6 4094 bp XP_031752430 X. tropicalis
XM_041581574 XM_041581574. XP_041437508.1 synaptojanin-1 isoform X7 4196 bp XP_041437508 X. laevis.L
XM_018248876 XM_018248876. synaptojanin-1 isoform X3 4907 bp XP_018104365 X. laevis.S
XM_018248879 XM_018248879. synaptojanin-1 isoform X7 4862 bp XP_018104368 X. laevis.S
XM_018248881 XM_018248881. synaptojanin-1 isoform X9 4823 bp XP_018104370 X. laevis.S
XM_018245935 XM_018245935. XP_018101424.1 PREDICTED: synaptojanin-1-like isoform X1 5162 bp XP_018101424 X. laevis.L
XM_041583402 XM_041583402. XP_041439336.1 synaptojanin-1 isoform X1 4931 bp XP_041439336 X. laevis.S
XM_041583403 XM_041583403. XP_041439337.1 synaptojanin-1 isoform X1 4956 bp XP_041439337 X. laevis.S
XM_041583404 XM_041583404. XP_041439338.1 synaptojanin-1 isoform X2 4922 bp XP_041439338 X. laevis.S
XM_041583405 XM_041583405. XP_041439339.1 synaptojanin-1 isoform X4 4892 bp XP_041439339 X. laevis.S
XM_041583406 XM_041583406. XP_041439340.1 synaptojanin-1 isoform X5 4886 bp XP_041439340 X. laevis.S
XM_041583407 XM_041583407. XP_041439341.1 synaptojanin-1 isoform X6 4877 bp XP_041439341 X. laevis.S
XM_041583408 XM_041583408. XP_041439342.1 synaptojanin-1 isoform X8 4850 bp XP_041439342 X. laevis.S
XM_041583409 XM_041583409. XP_041439343.1 synaptojanin-1 isoform X10 4265 bp XP_041439343 X. laevis.S
XM_041583410 XM_041583410. XP_041439344.1 synaptojanin-1 isoform X11 4262 bp XP_041439344 X. laevis.S
XM_041581567 XM_041581567. XP_041437501.1 synaptojanin-1 isoform X1 5186 bp XP_041437501 X. laevis.L
XM_041581568 XM_041581568. XP_041437502.1 synaptojanin-1 isoform X2 5177 bp XP_041437502 X. laevis.L
XM_041581569 XM_041581569. XP_041437503.1 synaptojanin-1 isoform X4 5147 bp XP_041437503 X. laevis.L
XM_041581570 XM_041581570. XP_041437504.1 synaptojanin-1 isoform X5 5105 bp XP_041437504 X. laevis.L
XM_041581571 XM_041581571. XP_041437505.1 synaptojanin-1 isoform X6 4184 bp XP_041437505 X. laevis.L
XM_041581572 XM_041581572. XP_041437506.1 synaptojanin-1 isoform X6 4353 bp XP_041437506 X. laevis.L
XM_041581573 XM_041581573. XP_041437507.1 synaptojanin-1 isoform X7 4350 bp XP_041437507 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g005615 X. tropicalis
NCBI 10.1 XBXL10_1g9126 X. laevis.S
NCBI 10.1 XBXL10_1g6280 X. laevis.L
ENSEMBL 10.0 synj1 X. tropicalis
JGI 9.1 Xelaev18014296m.g X. laevis.S
JGI 9.1 Xelaev18011499m.g X. laevis.L
Xenbase 9.1 gene24278 X. tropicalis
Xenbase 9.2 gene230 X. laevis.S
Xenbase 9.2 gene45836 X. laevis.L
ENSEMBL 9.1 synj1 X. tropicalis
JGI 8.0 Xetrov14051643m.g X. tropicalis
JGI 7.1 Xetro.B02135 X. tropicalis
JGI 7.2 Xelaev16068119m.g X. laevis.S
JGI 6.0 XeXenL6RMv10027069m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000009899 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_374000021 X. tropicalis
JGI 4.1 e_gw1.374.1.1 X. tropicalis
JGI 4.1 e_gw1.374.2.1 X. tropicalis
JGI 4.1 e_gw1.374.4.1 X. tropicalis
JGI 4.1 e_gw1.374.72.1 X. tropicalis
JGI 4.1 gw1.374.1.1 X. tropicalis
JGI 4.1 gw1.374.2.1 X. tropicalis
JGI 4.1 gw1.374.4.1 X. tropicalis
JGI 4.1 gw1.374.72.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740072 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_374000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_374000008 X. tropicalis

mRNAs based on gene models(54)

Source Version Model Species
NCBI 10.0 mRNA027827 X. tropicalis
NCBI 10.1 XBmRNA11777 X. laevis.L
NCBI 10.1 XBmRNA16989 X. laevis.S
ENSEMBL 10.0 ENSXETT00000094412 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082899 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089349 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089703 X. tropicalis
ENSEMBL 10.0 ENSXETT00000021802 X. tropicalis
JGI 9.1 Xelaev18011499m X. laevis.L
JGI 9.1 Xelaev18014296m X. laevis.S
Xenbase 9.1 rna48368 X. tropicalis
Xenbase 9.2 rna90376 X. laevis.L
Xenbase 9.2 rna647 X. laevis.S
ENSEMBL 9.1 ENSXETT00000091514 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066555 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094412 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081433 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068933 X. tropicalis
ENSEMBL 9.1 ENSXETT00000021802 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082899 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089349 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089703 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069509 X. tropicalis
JGI 8.0 Xetrov14051643m X. tropicalis
JGI 7.1 Xetro.B02135.6 X. tropicalis
JGI 7.1 Xetro.B02135.5 X. tropicalis
JGI 7.1 Xetro.B02135.2 X. tropicalis
JGI 7.1 Xetro.B02135.3 X. tropicalis
JGI 7.1 Xetro.B02135.4 X. tropicalis
JGI 7.1 Xetro.B02135.1 X. tropicalis
JGI 7.2 Xelaev16068119m X. laevis.S
JGI 6.0 XeXenL6RMv10027069m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_374000021 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021802 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021803 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021798 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021804 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021805 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021806 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021808 X. tropicalis
JGI 4.1 e_gw1.374.1.1 X. tropicalis
JGI 4.1 e_gw1.374.2.1 X. tropicalis
JGI 4.1 e_gw1.374.4.1 X. tropicalis
JGI 4.1 e_gw1.374.72.1 X. tropicalis
JGI 4.1 gw1.374.1.1 X. tropicalis
JGI 4.1 gw1.374.2.1 X. tropicalis
JGI 4.1 gw1.374.4.1 X. tropicalis
JGI 4.1 gw1.374.72.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3740072 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_374000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_374000008 X. tropicalis

mRNAs from cDNA libraries (30)

Clone Accession Species Library Anatomy Stage
XM_004912146 X. tropicalis
XM_018091409 X. tropicalis
XM_018091407 X. tropicalis
XM_018091406 X. tropicalis
XM_018091405 X. tropicalis
XM_018091404 X. tropicalis
XM_031896571 X. tropicalis
XM_031896570 X. tropicalis
IMAGE:5570406 BC049175 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XM_018245935 X. laevis.L
XM_018248881 X. laevis.S
XM_018248879 X. laevis.S
XM_018248876 X. laevis.S
XM_041583410 X. laevis.S
XM_041583409 X. laevis.S
XM_041583408 X. laevis.S
XM_041583407 X. laevis.S
XM_041583406 X. laevis.S
XM_041583405 X. laevis.S
XM_041583404 X. laevis.S
XM_041583403 X. laevis.S
XM_041583402 X. laevis.S
XM_041581574 X. laevis.L
XM_041581573 X. laevis.L
XM_041581572 X. laevis.L
XM_041581571 X. laevis.L
XM_041581570 X. laevis.L
XM_041581569 X. laevis.L
XM_041581568 X. laevis.L
XM_041581567 X. laevis.L

ESTs (25)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7643250 CX798661 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8915722 EL828523 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7646614 CX804845 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647090 CX805504 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649897 CX809775 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649940 CX810738 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7655899 CX826269 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7657856 CX830088 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7709017 CX962724 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAN11691 CX927752 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7598281 CX387670 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas057d06 AL683069 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7642452 CX797095 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8915722 EL828524 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7709017 CX962723 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAN11691 CX927751 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas057d06 BX746041 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7598281 CX387669 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5570406 BQ734725 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6881052 CB208259 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL098l04 BJ072472 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xlk154k07ex DC062417 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6881052 CB561302 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL098l04 BJ089489 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk154k07ex DC028898 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5