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Summary Expression Phenotypes Gene Literature (0) GO Terms (10) Nucleotides (189) Proteins (109) Interactants (7) Wiki
XB-GENEPAGE-956329

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for synj1 - Xenopus laevis

RefSeq mRNAs(21)
Models - Gene (8)
Models - mRNA (8)
mRNAs (22)
ESTs (7)

RefSeq mRNAs (21)

Accession Version name Length Protein Species
XM_041581569 XM_041581569. XP_041437503.1 synaptojanin-1 isoform X4 5147 bp XP_041437503 X. laevis.L
XM_041583406 XM_041583406. XP_041439340.1 synaptojanin-1 isoform X5 4886 bp XP_041439340 X. laevis.S
XM_041583407 XM_041583407. XP_041439341.1 synaptojanin-1 isoform X6 4877 bp XP_041439341 X. laevis.S
XM_041583408 XM_041583408. XP_041439342.1 synaptojanin-1 isoform X8 4850 bp XP_041439342 X. laevis.S
XM_041583409 XM_041583409. XP_041439343.1 synaptojanin-1 isoform X10 4265 bp XP_041439343 X. laevis.S
XM_041583410 XM_041583410. XP_041439344.1 synaptojanin-1 isoform X11 4262 bp XP_041439344 X. laevis.S
XM_018248876 XM_018248876. synaptojanin-1 isoform X3 4907 bp XP_018104365 X. laevis.S
XM_018248879 XM_018248879. synaptojanin-1 isoform X7 4862 bp XP_018104368 X. laevis.S
XM_018248881 XM_018248881. synaptojanin-1 isoform X9 4823 bp XP_018104370 X. laevis.S
XM_018245935 XM_018245935. XP_018101424.1 PREDICTED: synaptojanin-1-like isoform X1 5162 bp XP_018101424 X. laevis.L
XM_041581570 XM_041581570. XP_041437504.1 synaptojanin-1 isoform X5 5105 bp XP_041437504 X. laevis.L
XM_041581571 XM_041581571. XP_041437505.1 synaptojanin-1 isoform X6 4184 bp XP_041437505 X. laevis.L
XM_041581572 XM_041581572. XP_041437506.1 synaptojanin-1 isoform X6 4353 bp XP_041437506 X. laevis.L
XM_041581573 XM_041581573. XP_041437507.1 synaptojanin-1 isoform X7 4350 bp XP_041437507 X. laevis.L
XM_041581574 XM_041581574. XP_041437508.1 synaptojanin-1 isoform X7 4196 bp XP_041437508 X. laevis.L
XM_041583402 XM_041583402. XP_041439336.1 synaptojanin-1 isoform X1 4931 bp XP_041439336 X. laevis.S
XM_041583403 XM_041583403. XP_041439337.1 synaptojanin-1 isoform X1 4956 bp XP_041439337 X. laevis.S
XM_041583404 XM_041583404. XP_041439338.1 synaptojanin-1 isoform X2 4922 bp XP_041439338 X. laevis.S
XM_041583405 XM_041583405. XP_041439339.1 synaptojanin-1 isoform X4 4892 bp XP_041439339 X. laevis.S
XM_041581567 XM_041581567. XP_041437501.1 synaptojanin-1 isoform X1 5186 bp XP_041437501 X. laevis.L
XM_041581568 XM_041581568. XP_041437502.1 synaptojanin-1 isoform X2 5177 bp XP_041437502 X. laevis.L

Models - Gene (8)

Source Version Model Species
NCBI 10.1 XBXL10_1g9126 X. laevis.S
NCBI 10.1 XBXL10_1g6280 X. laevis.L
JGI 9.1 Xelaev18014296m.g X. laevis.S
JGI 9.1 Xelaev18011499m.g X. laevis.L
Xenbase 9.2 gene230 X. laevis.S
Xenbase 9.2 gene45836 X. laevis.L
JGI 7.2 Xelaev16068119m.g X. laevis.S
JGI 6.0 XeXenL6RMv10027069m.g X. laevis.S

mRNAs based on gene models(8)

Source Version Model Species
NCBI 10.1 XBmRNA11777 X. laevis.L
NCBI 10.1 XBmRNA16989 X. laevis.S
JGI 9.1 Xelaev18011499m X. laevis.L
JGI 9.1 Xelaev18014296m X. laevis.S
Xenbase 9.2 rna90376 X. laevis.L
Xenbase 9.2 rna647 X. laevis.S
JGI 7.2 Xelaev16068119m X. laevis.S
JGI 6.0 XeXenL6RMv10027069m X. laevis.S

mRNAs from cDNA libraries (22)

Clone Accession Species Library Anatomy Stage
IMAGE:5570406 BC049175 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XM_018245935 X. laevis.L
XM_018248881 X. laevis.S
XM_018248879 X. laevis.S
XM_018248876 X. laevis.S
XM_041583410 X. laevis.S
XM_041583409 X. laevis.S
XM_041583408 X. laevis.S
XM_041583407 X. laevis.S
XM_041583406 X. laevis.S
XM_041583405 X. laevis.S
XM_041583404 X. laevis.S
XM_041583403 X. laevis.S
XM_041583402 X. laevis.S
XM_041581574 X. laevis.L
XM_041581573 X. laevis.L
XM_041581572 X. laevis.L
XM_041581571 X. laevis.L
XM_041581570 X. laevis.L
XM_041581569 X. laevis.L
XM_041581568 X. laevis.L
XM_041581567 X. laevis.L

ESTs (7)

Clone Accession 5'/3' Species Library Anatomy Stage
xlk154k07ex DC062417 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL098l04 BJ072472 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6881052 CB208259 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5570406 BQ734725 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
rxlk154k07ex DC028898 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL098l04 BJ089489 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6881052 CB561302 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage