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Summary Expression Phenotypes Gene Literature (0) GO Terms (18) Nucleotides (111) Proteins (43) Interactants (98) Wiki
XB-GENEPAGE-962122

Show:     All X. tropicalis X. laevis

Nucleotide sequences for homer3 - All

RefSeq mRNAs(6)
Models - Gene (22)
Models - mRNA (27)
mRNAs (11)
ESTs (34)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001171520 NM_001171520.1 homer protein homolog 3 2085 bp NP_001164991 X. tropicalis
NM_001087155 NM_001087155.1 homer scaffold protein 3 L homeolog 5806 bp NP_001080624 X. laevis.L
XM_041580065 XM_041580065.1 XP_041435999.1 homer protein homolog 3 3133 bp XP_041435999 X. laevis.S
XM_041580066 XM_041580066.1 XP_041436000.1 homer protein homolog 3 3049 bp XP_041436000 X. laevis.S
XM_041580067 XM_041580067.1 XP_041436001.1 homer protein homolog 3 3050 bp XP_041436001 X. laevis.S
XM_041580068 XM_041580068.1 XP_041436002.1 homer protein homolog 3 2966 bp XP_041436002 X. laevis.S

Models - Gene (22)

Source Version Model Species
NCBI 10.1 XBXL10_1g1920 X. laevis.L
NCBI 10.1 XBXL10_1g4706 X. laevis.S
NCBI 10.0 XBXT10g004906 X. tropicalis
ENSEMBL 10.0 homer3 X. tropicalis
Xenbase 9.2 gene16089 X. laevis.S
Xenbase 9.2 gene16957 X. laevis.L
JGI 9.1 Xelaev18001129m.g X. laevis.S
JGI 9.1 Xelaev18006661m.g X. laevis.L
Xenbase 9.1 gene32013 X. tropicalis
ENSEMBL 9.1 homer3 X. tropicalis
JGI 7.2 Xelaev16069517m.g X. laevis.L
JGI 7.1 Xetro.A02011 X. tropicalis
JGI 6.0 XeXenL6RMv10011749m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000010136 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_646000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_646000009 X. tropicalis
JGI 4.1 gw1.646.59.1 X. tropicalis
JGI 4.1 gw1.646.44.1 X. tropicalis
JGI 4.1 e_gw1.646.2.1 X. tropicalis
JGI 4.1 gw1.646.2.1 X. tropicalis
JGI 4.1 e_gw1.646.59.1 X. tropicalis
JGI 4.1 e_gw1.646.44.1 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.1 XBmRNA3426 X. laevis.L
NCBI 10.1 XBmRNA8751 X. laevis.S
ENSEMBL 10.0 ENSXETT00000022356 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094121 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072692 X. tropicalis
NCBI 10.0 mRNA024357 X. tropicalis
Xenbase 9.2 rna49548 X. laevis.L
Xenbase 9.2 rna47036 X. laevis.S
Xenbase 9.1 rna60659 X. tropicalis
JGI 9.1 Xelaev18006661m X. laevis.L
JGI 9.1 Xelaev18001129m X. laevis.S
ENSEMBL 9.1 ENSXETT00000094121 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097722 X. tropicalis
ENSEMBL 9.1 ENSXETT00000022356 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072692 X. tropicalis
JGI 7.2 Xelaev16069517m X. laevis.L
JGI 7.1 Xetro.A02011.1 X. tropicalis
JGI 6.0 XeXenL6RMv10011749m X. laevis.L
JGI 4.1 gw1.646.2.1 X. tropicalis
JGI 4.1 e_gw1.646.44.1 X. tropicalis
JGI 4.1 e_gw1.646.59.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022356 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_646000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_646000005 X. tropicalis
JGI 4.1 e_gw1.646.2.1 X. tropicalis
JGI 4.1 gw1.646.44.1 X. tropicalis
JGI 4.1 gw1.646.59.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:7846474 BC121670 X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8915256 BC154866 X. tropicalis NICHD_XGC_tropTe1 testis frog
NM_001171520 X. tropicalis
IMAGE:4682727 BC045262 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001087155 X. laevis.L
IMAGE:6634715 BC068802 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001091197 X. laevis.S
XM_041580065 X. laevis.S
XM_041580066 X. laevis.S
XM_041580067 X. laevis.S
XM_041580068 X. laevis.S

ESTs (34)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8915256 EL828037 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7613069 CX405889 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8907855 EL801585 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8941535 EL632763 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:9009084 EL809844 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TTbA058o23 CR429715 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:9013202 EL858947 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
CAAO10743 CX960222 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA036e17 CR439552 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7852229 DT391738 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TTpA015e10 BX715307 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7846474 DT529830 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7846474 DT529829 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8941535 EL632762 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8915256 EL828038 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTbA036e17 CR439553 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:9013202 EL858948 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTbA058o23 CR429716 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA015e10 BX715308 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8907855 EL801586 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:9009084 EL809845 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
CAAO10743 CX960221 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7852229 DT391737 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7854676 DT396984 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
PBX0057G05 AW637359 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl264d19 DC113021 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4202028 BG233897 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5570703 BQ734050 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4682727 BQ735679 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998O1610564 BX849675 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3399854 BG162049 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:3399854 BG019842 3' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
XL503p05ex BP735060 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL088k22 BJ084266 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25