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Summary Expression Phenotypes Gene Literature (11) GO Terms (4) Nucleotides (162) Proteins (47) Interactants (147) Wiki
XB-GENEPAGE-963686

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ufd1 - All

RefSeq mRNAs(3)
Models - Gene (26)
Models - mRNA (31)
mRNAs (8)
ESTs (63)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001006805 NM_001006805.1 ubiquitin recognition factor in ER-associated degradation protein 1 1452 bp NP_001006806 X. tropicalis
NM_001090169 NM_001090169.1 ubiquitin fusion degradation protein 1 homolog 1238 bp NP_001083638 X. laevis.S
XM_018262069 XM_018262069.2 ubiquitin recognition factor in ER-associated degradation protein 1 1909 bp XP_018117558 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g5293 X. laevis.S
NCBI 10.1 XBXL10_1g2725 X. laevis.L
NCBI 10.0 XBXT10g011517 X. tropicalis
ENSEMBL 10.0 ufd1 X. tropicalis
Xenbase 9.2 gene10354 X. laevis.S
Xenbase 9.2 gene3975 X. laevis.L
JGI 9.1 Xelaev18010539m.g X. laevis.S
JGI 9.1 Xelaev18007694m.g X. laevis.L
Xenbase 9.1 gene7846 X. tropicalis
ENSEMBL 9.1 ufd1 X. tropicalis
JGI 8.0 Xetrov14001507m.g X. tropicalis
JGI 7.2 Xelaev16080296m.g X. laevis.S
JGI 7.1 Xetro.A00804 X. tropicalis
JGI 6.0 XeXenL6RMv10041053m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000018601 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120241 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120238 X. tropicalis
JGI 4.1 e_gw1.12.245.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120072 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120239 X. tropicalis
JGI 4.1 e_gw1.12.243.1 X. tropicalis
JGI 4.1 e_gw1.12.242.1 X. tropicalis
JGI 4.1 gw1.12.245.1 X. tropicalis
JGI 4.1 gw1.12.243.1 X. tropicalis
JGI 4.1 gw1.12.242.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000072 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA9841 X. laevis.S
NCBI 10.1 XBmRNA4786 X. laevis.L
NCBI 10.0 mRNA057154 X. tropicalis
ENSEMBL 10.0 ENSXETT00000074423 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092876 X. tropicalis
ENSEMBL 10.0 ENSXETT00000040258 X. tropicalis
Xenbase 9.2 rna11566 X. laevis.L
Xenbase 9.2 rna30097 X. laevis.S
Xenbase 9.1 rna25304 X. tropicalis
JGI 9.1 Xelaev18007694m X. laevis.L
ENSEMBL 9.1 ENSXETT00000040258 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072961 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092876 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074423 X. tropicalis
JGI 9.1 Xelaev18010539m X. laevis.S
JGI 8.0 Xetrov14001507m X. tropicalis
JGI 7.2 Xelaev16080296m X. laevis.S
JGI 7.1 Xetro.A00804.1 X. tropicalis
JGI 6.0 XeXenL6RMv10041053m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_12000072 X. tropicalis
JGI 4.1 e_gw1.12.243.1 X. tropicalis
JGI 4.1 e_gw1.12.245.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000040258 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120072 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120238 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120239 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120241 X. tropicalis
JGI 4.1 e_gw1.12.242.1 X. tropicalis
JGI 4.1 gw1.12.242.1 X. tropicalis
JGI 4.1 gw1.12.243.1 X. tropicalis
JGI 4.1 gw1.12.245.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:6980401 BC076680 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
NM_001006805 X. tropicalis
IMAGE:7210290 BC087439 X. laevis.L
AF233524 X. laevis.L
XM_018262069 X. laevis.L
IMAGE:4680822 BC072284 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001090169 X. laevis.S
IMAGE:4031563 BC061930 X. laevis.S

ESTs (63)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA077l18 BX738105 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XZT12118 CX320339 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7592826 CX326799 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO4778 CX936172 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7787678 CX330118 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7635244 CX338875 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT1419 CX360614 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7672399 CX880780 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TGas034a19 AL649026 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9012377 EL857586 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st23m07 DC169902 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st111f16 DC194727 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7667340 CX854336 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7666166 CX852218 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7665861 CX851450 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8903373 EL805470 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8903676 EL794779 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
xtbs07L02 CN093260 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTbA028h06 CR413641 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA027g13 CR419880 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8914880 EL838009 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
THdA013n12 CR566022 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8923930 EL669377 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
THdA035i02 CR569099 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA052k08 CR587030 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7756802 DR874422 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7718953 CX981501 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:6980401 CF149477 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
xtbs07L02 CN093259 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst23m07 DC139734 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA027g13 CR419881 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA013n12 CR566023 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA052k08 CR587031 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA052o11 CR589013 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7787678 CX330117 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7627960 CX381730 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8903373 EL805471 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7665861 CX851449 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7666166 CX852217 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7667340 CX854335 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7672399 CX880779 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
CAAO4778 CX936171 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7716509 CX977009 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7718953 CX981500 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8923930 EL669376 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8914880 EL838010 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:3580075 BG160172 5' X. laevis.S Wellcome CRC pRN3 head head NF stage 29 and 30
PBX0116B12 AW642222 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xlk141d06ex DC048883 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk136c07ex DC047234 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8643200 EB727418 5' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
PBX0021E03 AW634500 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:8539514 EB479448 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
IMAGE:8545649 EB480908 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:6932889 CB944567 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
XL148m04 BJ098997 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL505j18ex BP735532 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL171l19 BJ632013 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL166i22 BJ630757 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL018b22 BJ047920 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL073p05 BJ079925 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk141d06ex DC015614 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk136c07ex DC014008 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5