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Summary Expression Phenotypes Gene Literature (1) GO Terms (9) Nucleotides (360) Proteins (60) Interactants (54) Wiki
XB-GENEPAGE-968230

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ssr4 - All

RefSeq mRNAs(4)
Models - Gene (34)
Models - mRNA (45)
mRNAs (15)
ESTs (212)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_002937874 XM_002937874.4 translocon-associated protein subunit delta 906 bp XP_002937920 X. tropicalis
NM_001088132 NM_001088132.1 signal sequence receptor, delta L homeolog precursor 663 bp NP_001081601 X. laevis.L
XM_018228699 XM_018228699.2 signal sequence receptor, delta L homeolog isoform X1 756 bp XP_018084188 X. laevis.L
XM_018228700 XM_018228700.2 signal sequence receptor, delta L homeolog isoform X2 761 bp XP_018084189 X. laevis.L

Models - Gene (34)

Source Version Model Species
NCBI 10.1 XBXL10_1g37772 X. laevis.S
NCBI 10.1 XBXL10_1g34696 X. laevis.L
NCBI 10.0 XBXT10g016871 X. tropicalis
ENSEMBL 10.0 ssr4 X. tropicalis
Xenbase 9.2 gene14016 X. laevis.S
Xenbase 9.2 gene167 X. laevis.L
JGI 9.1 Xelaev18041786m.g X. laevis.S
JGI 9.1 Xelaev18038615m.g X. laevis.L
Xenbase 9.1 gene1272 X. tropicalis
ENSEMBL 9.1 ssr4 X. tropicalis
JGI 8.0 Xetrov14032486m.g X. tropicalis
JGI 7.2 Xelaev16006270m.g X. laevis.L
JGI 7.1 Xetro.H00315 X. tropicalis
JGI 6.0 XeXenL6RMv10004686m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000000730 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_322000005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3220063 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_322000017 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_322000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_322000016 X. tropicalis
JGI 4.1 e_gw1.322.63.1 X. tropicalis
JGI 4.1 e_gw1.322.64.1 X. tropicalis
JGI 4.1 e_gw1.322.65.1 X. tropicalis
JGI 4.1 gw1.322.64.1 X. tropicalis
JGI 4.1 gw1.322.65.1 X. tropicalis
JGI 4.1 gw1.322.63.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3220013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3220064 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3220065 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3220005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3220016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3220017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3220004 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_322000003 X. tropicalis

mRNAs based on gene models(45)

Source Version Model Species
NCBI 10.1 XBmRNA65576 X. laevis.L
NCBI 10.1 XBmRNA71397 X. laevis.S
NCBI 10.0 mRNA083586 X. tropicalis
ENSEMBL 10.0 ENSXETT00000001617 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072701 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081005 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085374 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091130 X. tropicalis
Xenbase 9.2 rna465 X. laevis.L
Xenbase 9.2 rna40825 X. laevis.S
Xenbase 9.1 rna4072 X. tropicalis
JGI 9.1 Xelaev18041786m X. laevis.S
ENSEMBL 9.1 ENSXETT00000081005 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072701 X. tropicalis
ENSEMBL 9.1 ENSXETT00000001617 X. tropicalis
JGI 9.1 Xelaev18038615m X. laevis.L
ENSEMBL 9.1 ENSXETT00000100496 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091130 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085374 X. tropicalis
JGI 8.0 Xetrov14032486m X. tropicalis
JGI 7.2 Xelaev16006270m X. laevis.L
JGI 7.1 Xetro.H00315.1 X. tropicalis
JGI 6.0 XeXenL6RMv10004686m X. laevis.L
JGI 4.1 e_gw1.322.64.1 X. tropicalis
JGI 4.1 gw1.322.65.1 X. tropicalis
JGI 4.1 gw1.322.64.1 X. tropicalis
JGI 4.1 gw1.322.63.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_322000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_322000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_322000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_322000016 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_322000005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3220065 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3220064 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3220063 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3220013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3220004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3220017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3220016 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3220005 X. tropicalis
JGI 4.1 e_gw1.322.65.1 X. tropicalis
JGI 4.1 e_gw1.322.63.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000055055 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001617 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001616 X. tropicalis

mRNAs from cDNA libraries (15)

Clone Accession Species Library Anatomy Stage
IMAGE:7882587 BC166953 X. tropicalis
TTpA072k07 CU025079 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XM_002937874 X. tropicalis
IMAGE:6931571 BC078540 X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
NM_001088132 X. laevis.L
X0286 X90584 X. laevis.L
XM_018228699 X. laevis.L
XM_018228700 X. laevis.L
IMAGE:6879877 BC053796 X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:7983501 BC110715 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:3396671 BC123282 X. laevis.S
IMAGE:3377803 BC133749 X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7201877 BC152714 X. laevis.S
XR_001932919 X. laevis.S
XR_005963860 X. laevis.S

ESTs (212)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu067l05 BX683737 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076f07 AL778672 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076f13 AL778675 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu070b13 AL778825 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu092n12 AL780228 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu091n12 AL781394 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu075o08 AL781593 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu068k03 AL783608 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu079g24 AL784730 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu121d04 AL788344 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu107d01 AL793362 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu119k09 AL793497 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu124g22 AL799885 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu121a04 AL799929 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu067l05 AL800739 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu102f16 AL803252 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
st102d07 DC191079 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st103d07 DC191308 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st104d07 DC191545 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:9015541 EL861916 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7027300 CF784420 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:8865087 EL701893 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7091222 CK653708 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7091870 CK653860 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7091072 CK653957 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7092128 CK654336 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7093874 CK655996 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:9020095 EL869068 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st18p02 DC168250 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:9014083 EL859915 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas005o21 AL595357 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas018i20 AL629485 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5383419 BQ395355 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7614024 CX390022 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610654 CX377413 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA006m05 CR411605 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas025c18 AL629736 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas015l02 AL632007 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA043n16 CR434208 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas038n03 AL648252 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA008i10 CR448518 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas033g03 AL648418 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
THdA018o11 CR569575 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA043c14 CR578177 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas048o09 AL650991 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA005p24 BX708906 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA001h01 BX711369 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas043k15 AL651466 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA072k07 BX718926 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas053b09 AL676147 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA049b06 BX730739 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas053l11 AL676206 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA058f02 BX731870 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas059h21 AL679363 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas131j07 AL959098 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas106f02 AL967959 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7586549 CX319576 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st28k21 DC171285 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7634220 CX337938 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622878 CX372050 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st31d06 DC172309 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st32d06 DC172580 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st5g12 DC174531 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st6c20 DC174767 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7572024 CX435128 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st7p08 DC175289 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7537300 CX446079 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st50p06 DC179253 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7563175 CX467925 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st89n12 DC188888 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7565957 CX482862 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st90n12 DC189127 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7545013 CX486692 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st91n12 DC189373 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7545668 CX488505 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st93b24 DC189659 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7547539 CX488994 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9012439 EL857682 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9011740 EL856590 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9010016 EL854238 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9009840 EL853759 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8886119 EL842887 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8883301 EL838589 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8928237 EL676210 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8924610 EL670078 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8949681 EG654585 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7742528 DN034715 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7739117 DN027942 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7733481 DN017400 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
CAAO5428 CX937359 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:6985995 CF153378 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6983929 CF151886 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7597117 DR891610 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584405 CX415319 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608918 CX410319 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu017f18 AL645318 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu029o23 AL646609 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu030j12 AL655597 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu030m17 AL656241 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21