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Summary Expression Phenotypes Gene Literature (4) GO Terms (5) Nucleotides (218) Proteins (65) Interactants (175) Wiki
XB-GENEPAGE-972277

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ube2d3 - All

RefSeq mRNAs(7)
Models - Gene (35)
Models - mRNA (43)
mRNAs (14)
ESTs (102)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001016064 NM_001016064.2 ubiquitin-conjugating enzyme E2 D3 1137 bp NP_001016064 X. tropicalis
NM_001090965 NM_001090965.1 ubiquitin-conjugating enzyme E2 D2 1134 bp NP_001084434 X. laevis.L
XM_041577727 XM_041577727.1 XP_041433661.1 ubiquitin-conjugating enzyme E2 D2 isoform X1 2308 bp XP_041433661 X. laevis.L
XM_041577742 XM_041577742.1 XP_041433676.1 ubiquitin-conjugating enzyme E2 D2 isoform X2 2256 bp XP_041433676 X. laevis.L
XM_018243390 XM_018243390.2 ubiquitin-conjugating enzyme E2 D2 isoform X2 2351 bp XP_018098879 X. laevis.S
XM_041579671 XM_041579671.1 XP_041435605.1 ubiquitin-conjugating enzyme E2 D2 isoform X1 2437 bp XP_041435605 X. laevis.S
XM_041579672 XM_041579672.1 XP_041435606.1 ubiquitin-conjugating enzyme E2 D2 isoform X3 2405 bp XP_041435606 X. laevis.S

Models - Gene (35)

Source Version Model Species
NCBI 10.1 XBXL10_1g4094 X. laevis.S
NCBI 10.1 XBXL10_1g1197 X. laevis.L
NCBI 10.0 XBXT10g001135 X. tropicalis
ENSEMBL 10.0 ube2d3 X. tropicalis
Xenbase 9.2 gene3922 X. laevis.S
Xenbase 9.2 gene18510 X. laevis.L
JGI 9.1 Xelaev18009413m.g X. laevis.S
JGI 9.1 Xelaev18005719m.g X. laevis.L
Xenbase 9.1 gene24397 X. tropicalis
ENSEMBL 9.1 ube2d3 X. tropicalis
JGI 8.0 Xetrov14004238m.g X. tropicalis
JGI 7.2 Xelaev16032372m.g X. laevis.L
JGI 7.1 Xetro.A02611 X. tropicalis
JGI 6.0 XeXenL6RMv10050772m.g X. laevis.L
JGI 6.0 XeXenL6RMv10012307m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000021323 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1110003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_111000037 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_111000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_111000036 X. tropicalis
JGI 4.1 gw1.111.115.1 X. tropicalis
JGI 4.1 gw1.111.116.1 X. tropicalis
JGI 4.1 gw1.111.5.1 X. tropicalis
JGI 4.1 e_gw1.111.115.1 X. tropicalis
JGI 4.1 e_gw1.111.116.1 X. tropicalis
JGI 4.1 e_gw1.111.5.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1110016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110115 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110116 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1110036 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1110037 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1110007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_111000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_111000003 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.1 XBmRNA7542 X. laevis.S
NCBI 10.1 XBmRNA1935 X. laevis.L
ENSEMBL 10.0 ENSXETT00000124582 X. tropicalis
NCBI 10.0 mRNA005706 X. tropicalis
ENSEMBL 10.0 ENSXETT00000046120 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081335 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093855 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098751 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118680 X. tropicalis
Xenbase 9.2 rna11439 X. laevis.S
Xenbase 9.2 rna54060 X. laevis.L
ENSEMBL 9.1 ENSXETT00000046120 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081335 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093855 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098751 X. tropicalis
Xenbase 9.1 rna48590 X. tropicalis
JGI 9.1 Xelaev18005719m X. laevis.L
JGI 9.1 Xelaev18009413m X. laevis.S
JGI 8.0 Xetrov14004238m X. tropicalis
JGI 7.2 Xelaev16032372m X. laevis.L
JGI 7.1 Xetro.A02611.1 X. tropicalis
JGI 6.0 XeXenL6RMv10012307m X. laevis.L
JGI 6.0 XeXenL6RMv10050772m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_111000036 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_111000037 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_111000007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_111000003 X. tropicalis
JGI 4.1 gw1.111.115.1 X. tropicalis
JGI 4.1 gw1.111.116.1 X. tropicalis
JGI 4.1 gw1.111.5.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1110003 X. tropicalis
JGI 4.1 e_gw1.111.5.1 X. tropicalis
JGI 4.1 e_gw1.111.115.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000046120 X. tropicalis
JGI 4.1 e_gw1.111.116.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1110036 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1110037 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1110016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1110007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110115 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110116 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_111000003 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
TNeu058o16 CR848402 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas005e16 CR762271 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9040544 BC171281 X. tropicalis
NM_001016064 X. tropicalis
IMAGE:9040540 BC171277 X. tropicalis
IMAGE:7740762 BC155484 X. tropicalis NIH_XGC_tropLiv1 liver frog
AB105546 X. laevis.L
IMAGE:6947388 BC084359 X. laevis.L
NM_001090965 X. laevis.L
XM_041577727 X. laevis.L
XM_041577742 X. laevis.L
XM_018243390 X. laevis.S
XM_041579672 X. laevis.S
XM_041579671 X. laevis.S

ESTs (102)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu027k20 AL641298 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu025o10 AL643945 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu046e08 AL658966 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu060c23 AL673388 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu052f08 AL676474 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8885379 EL841581 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8921324 EL835713 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7740762 DN031226 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7717736 CX979612 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:4439974 BG348647 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TGas005e16 AL594229 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas037i11 AL647569 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas049h07 AL649486 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas059i02 AL674799 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas081a23 AL776999 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas104a05 AL958636 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas104c16 AL961099 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9018613 EL866884 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8888204 EL846794 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8887160 EL844996 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st80f16 DC186582 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st85i07 DC187850 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st86i07 DC188077 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st113m02 DC195083 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO8577 CX956214 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7702711 CX938160 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7668231 CX855207 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8862831 EL706858 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
xtbs31H24 CN089570 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7614505 CX390309 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630368 CX370734 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618080 CX363121 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7595214 CX335160 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA032c12 BX741771 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA033g10 BX740257 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA051f02 BX724119 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA016k13 BX711734 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA002k16 BX705476 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA027e11 CR419861 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA010o03 CR414075 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu141h16 AL799021 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu126h07 AL795530 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu058o16 AL677906 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8885212 EL841718 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TNeu021j10 AL636414 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xtbs31H24 CN089569 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TGas081a23 BX752642 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas104a05 BX754118 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas088l10 BX763539 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7511738 CX740623 3' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
TNeu058o16 BX684173 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu052f08 BX689176 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA063l18 CR413769 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr33H16 CN109498 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA016k13 BX711735 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA033g10 BX740258 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7595214 CX335159 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618080 DR897705 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs33G17 CN090274 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7702711 CX938159 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8577 CX956213 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7740762 DN031225 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8936568 EL639301 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8885379 EL841582 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8888204 EL846795 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:3398984 BE576134 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
XL469e21ex BP692688 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
PBX0014C07 AW633961 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL466i20ex BP691822 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:5162501 BQ398498 5' X. laevis.L Soares NXEG egg unfertilized egg stage
XL009a02 BJ040896 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
xl242k06 DC106539 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4085185 BG893313 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:8641107 EB735775 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
xlk149b24ex DC051453 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3579969 BG160152 5' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
PBX0135H12 AW644059 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xlk133n14ex DC046489 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk131j12ex DC045769 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk125g13ex DC043766 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGp998N098294 BX852229 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
PBX0107C02 AW641510 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL082c20 BJ065168 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6932476 CB942456 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6931899 CB942495 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
PBX0049B11 AW636654 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL500n01ex BP701226 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
PBX0016G11 AW634234 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxlk150b24ex DC018414 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL466i20ex BP726225 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxlk149b24ex DC018102 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:5162501 BQ398497 3' X. laevis.L Soares NXEG egg unfertilized egg stage
rxlk133n14ex DC013293 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk131j12ex DC012605 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk125g13ex DC010637 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk108p14ex DC005580 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL009a02 BJ055265 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl242k06 DC072179 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4060418 BG810692 3' X. laevis.L Wellcome CRC pCS2+ st19-26 whole organism NF stage 19 to NF stage 26