Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (31) Nucleotides (130) Proteins (50) Interactants (74) Wiki
XB-GENEPAGE-976370

Show:     All X. tropicalis X. laevis

Nucleotide sequences for wdr48 - All

RefSeq mRNAs(4)
Models - Gene (29)
Models - mRNA (37)
mRNAs (6)
ESTs (38)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001079390 NM_001079390.1 WD repeat-containing protein 48 2967 bp NP_001072858 X. tropicalis
XM_041567340 XM_041567340.1 XP_041423274.1 WD repeat-containing protein 48 isoform X1 2389 bp XP_041423274 X. laevis.S
XM_041567341 XM_041567341.1 XP_041423275.1 WD repeat-containing protein 48 isoform X2 2291 bp XP_041423275 X. laevis.S
XM_041565777 XM_041565777.1 XP_041421711.1 WD repeat-containing protein 48 2739 bp XP_041421711 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g28712 X. laevis.S
NCBI 10.1 XBXL10_1g26772 X. laevis.L
NCBI 10.0 XBXT10g014633 X. tropicalis
ENSEMBL 10.0 wdr48 X. tropicalis
Xenbase 9.2 gene35997 X. laevis.L
Xenbase 9.2 gene34531 X. laevis.S
JGI 9.1 Xelaev18032804m.g X. laevis.S
JGI 9.1 Xelaev18030644m.g X. laevis.L
Xenbase 9.1 gene29159 X. tropicalis
ENSEMBL 9.1 wdr48 X. tropicalis
JGI 8.0 Xetrov14027910m.g X. tropicalis
JGI 7.2 Xelaev16060503m.g X. laevis.S
JGI 7.1 Xetro.F01718 X. tropicalis
JGI 6.0 XeXenL6RMv10027074m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000004247 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_28000005 X. tropicalis
JGI 4.1 e_gw1.28.144.1 X. tropicalis
JGI 4.1 e_gw1.28.299.1 X. tropicalis
JGI 4.1 e_gw1.28.9.1 X. tropicalis
JGI 4.1 gw1.28.144.1 X. tropicalis
JGI 4.1 gw1.28.299.1 X. tropicalis
JGI 4.1 gw1.28.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_280014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_280009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_280144 X. tropicalis
JGI 4.1 estExt_Genewise1.C_280299 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_280018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_28000018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_280005 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.1 XBmRNA53954 X. laevis.S
NCBI 10.1 XBmRNA50038 X. laevis.L
ENSEMBL 10.0 ENSXETT00000078561 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099327 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091738 X. tropicalis
ENSEMBL 10.0 ENSXETT00000009249 X. tropicalis
NCBI 10.0 mRNA072407 X. tropicalis
Xenbase 9.2 rna74127 X. laevis.S
Xenbase 9.2 rna76149 X. laevis.L
ENSEMBL 9.1 ENSXETT00000091738 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099327 X. tropicalis
Xenbase 9.1 rna56191 X. tropicalis
JGI 9.1 Xelaev18032804m X. laevis.S
ENSEMBL 9.1 ENSXETT00000009249 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078561 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086870 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090720 X. tropicalis
JGI 9.1 Xelaev18030644m X. laevis.L
JGI 8.0 Xetrov14027910m X. tropicalis
JGI 7.2 Xelaev16060503m X. laevis.S
JGI 7.1 Xetro.F01718.1 X. tropicalis
JGI 6.0 XeXenL6RMv10027074m X. laevis.S
JGI 4.1 estExt_Genewise1.C_280144 X. tropicalis
JGI 4.1 e_gw1.28.299.1 X. tropicalis
JGI 4.1 e_gw1.28.9.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009249 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_280018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_280005 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_280014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_280009 X. tropicalis
JGI 4.1 e_gw1.28.144.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_280299 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_28000018 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_28000005 X. tropicalis
JGI 4.1 gw1.28.144.1 X. tropicalis
JGI 4.1 gw1.28.299.1 X. tropicalis
JGI 4.1 gw1.28.9.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7690121 BC123017 X. tropicalis NIH_XGC_tropTe4 testis frog
NM_001079390 X. tropicalis
IMAGE:6317582 BC068705 X. laevis.S
XM_041567340 X. laevis.S
XM_041567341 X. laevis.S
XM_041565777 X. laevis.L

ESTs (38)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA062m02 BX737644 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8890776 EL850830 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8924732 EL670500 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7786070 CX327682 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607311 CX367852 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO4859 CX936320 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7614192 CX389889 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas080h18 AL782726 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096h18 AL962098 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7659210 CX839062 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas106a22 AL963696 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7664282 CX849129 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
st82l04 DC187151 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st84g19 DC187577 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7690121 CX913976 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TTbA047f20 CR420399 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8903419 EL805360 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TTpA037m11 BX719879 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8890776 EL850831 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8903419 EL805361 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
rst84g19 DC157443 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas080h18 BX750734 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096h18 BX755038 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA047f20 CR420400 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA062m02 BX737645 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7786070 CX327681 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7614192 CX389888 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607311 DR894414 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7659210 CX839061 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7664282 CX849128 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7690121 CX913975 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO4859 CX936319 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8924732 EL670499 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
XL183d08 BJ617991 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8320568 DY554534 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL184d08 BJ618244 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL184d08 BJ634782 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL183d08 BJ634527 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5