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Summary Expression Phenotypes Gene Literature (7) GO Terms (71) Nucleotides (462) Proteins (61) Interactants (79) Wiki
XB-GENEPAGE-977071

Show:     All X. tropicalis X. laevis

Nucleotide sequences for apex1 - All

RefSeq mRNAs(8)
Models - Gene (34)
Models - mRNA (39)
mRNAs (12)
ESTs (316)

RefSeq mRNAs (8)

Accession Version Protein Name Length Protein Species
NM_203976 NM_203976.2 DNA-(apurinic or apyrimidinic site) endonuclease 2146 bp NP_989307 X. tropicalis
XM_012958392 XM_012958392.3 DNA-(apurinic or apyrimidinic site) lyase isoform X1 2036 bp XP_012813846 X. tropicalis
XM_012958402 XM_012958402.3 DNA-(apurinic or apyrimidinic site) lyase isoform X2 2015 bp XP_012813856 X. tropicalis
XM_012958408 XM_012958408.3 DNA-(apurinic or apyrimidinic site) lyase isoform X2 2011 bp XP_012813862 X. tropicalis
XM_012958414 XM_012958414.3 DNA-(apurinic or apyrimidinic site) lyase isoform X2 2008 bp XP_012813868 X. tropicalis
NM_001091760 NM_001091760.1 APEX nuclease (multifunctional DNA repair enzyme) 1 L homeolog 2067 bp NP_001085229 X. laevis.L
XM_018243975 XM_018243975.2 DNA-(apurinic or apyrimidinic site) endonuclease 1890 bp XP_018099464 X. laevis.S
XM_018243976 XM_018243976.2 DNA-(apurinic or apyrimidinic site) endonuclease 1949 bp XP_018099465 X. laevis.S

Models - Gene (34)

Source Version Model Species
NCBI 10.1 XBXL10_1g5078 X. laevis.S
NCBI 10.1 XBXL10_1g2441 X. laevis.L
NCBI 10.0 XBXT10g006784 X. tropicalis
ENSEMBL 10.0 apex1 X. tropicalis
Xenbase 9.2 gene35416 X. laevis.S
Xenbase 9.2 gene14687 X. laevis.L
JGI 9.1 Xelaev18010314m.g X. laevis.S
JGI 9.1 Xelaev18007351m.g X. laevis.L
Xenbase 9.1 gene25114 X. tropicalis
ENSEMBL 9.1 apex1 X. tropicalis
JGI 8.0 Xetrov14002155m.g X. tropicalis
JGI 7.2 Xelaev16037318m.g X. laevis.L
JGI 7.1 Xetro.A01101 X. tropicalis
JGI 6.0 XeXenL6RMv10028388m.g X. laevis.L
JGI 6.0 XeXenL6RMv10019093m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000024773 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_910045 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_91000108 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_91000107 X. tropicalis
JGI 4.1 e_gw1.91.271.1 X. tropicalis
JGI 4.1 e_gw1.91.272.1 X. tropicalis
JGI 4.1 e_gw1.91.300.1 X. tropicalis
JGI 4.1 gw1.91.271.1 X. tropicalis
JGI 4.1 gw1.91.272.1 X. tropicalis
JGI 4.1 gw1.91.300.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_910080 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910271 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910272 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910300 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_910021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_910106 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_910107 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_91000011 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_91000022 X. tropicalis

mRNAs based on gene models(39)

Source Version Model Species
NCBI 10.1 XBmRNA9458 X. laevis.S
NCBI 10.1 XBmRNA4266 X. laevis.L
NCBI 10.0 mRNA033569 X. tropicalis
ENSEMBL 10.0 ENSXETT00000045430 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106594 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124608 X. tropicalis
Xenbase 9.2 rna75386 X. laevis.S
Xenbase 9.2 rna42801 X. laevis.L
JGI 9.1 Xelaev18007351m X. laevis.L
ENSEMBL 9.1 ENSXETT00000045430 X. tropicalis
Xenbase 9.1 rna49774 X. tropicalis
JGI 9.1 Xelaev18010314m X. laevis.S
JGI 8.0 Xetrov14002155m X. tropicalis
JGI 7.2 Xelaev16037318m X. laevis.L
JGI 7.1 Xetro.A01101.1 X. tropicalis
JGI 7.1 Xetro.A01101.3 X. tropicalis
JGI 7.1 Xetro.A01101.4 X. tropicalis
JGI 7.1 Xetro.A01101.2 X. tropicalis
JGI 6.0 XeXenL6RMv10019093m X. laevis.L
JGI 6.0 XeXenL6RMv10028388m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_91000011 X. tropicalis
JGI 4.1 e_gw1.91.272.1 X. tropicalis
JGI 4.1 e_gw1.91.300.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000045430 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_910021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_910106 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_910107 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_910045 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_910080 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910271 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910272 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910300 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_91000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_91000107 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_91000108 X. tropicalis
JGI 4.1 e_gw1.91.271.1 X. tropicalis
JGI 4.1 gw1.91.271.1 X. tropicalis
JGI 4.1 gw1.91.272.1 X. tropicalis
JGI 4.1 gw1.91.300.1 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
IMAGE:5379355 BC064266 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6980156 BC080950 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu097f05 CR760104 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_203976 X. tropicalis
XM_012958392 X. tropicalis
XM_012958402 X. tropicalis
XM_012958408 X. tropicalis
XM_012958414 X. tropicalis
IMAGE:4202632 BC072056 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001091760 X. laevis.L
XM_018243975 X. laevis.S
XM_018243976 X. laevis.S

ESTs (316)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9018140 EL866649 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTpA026h10 BX719718 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:4439789 BG348556 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:9014142 EL860494 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTbA010n18 CR417487 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:9012980 EL859047 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTpA015e04 BX715301 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas015b11 AL631230 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas038d03 AL648193 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas049i21 AL649412 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas029h21 AL652963 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas039o19 AL653729 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas041k03 AL654684 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas060a18 AL681958 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8923950 EL669204 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TTbA046a24 CR427498 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7800851 DR833623 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7530590 CX420232 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO8961 CX956926 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA044c06 CR430332 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7698502 CX930969 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xtbs20K01 CN081826 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTbA059i08 CR432225 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7572739 CX435431 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA074n23 CR443799 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7616086 CX392807 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6994771 CF239891 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7598625 CX388005 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7638657 CX383780 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7529548 CX426462 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7627067 CX380753 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA043d11 CR445698 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7632939 CX373728 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7537994 CX447531 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7617607 CX361960 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619374 CX346932 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7790466 CX323901 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA006n02 CR562884 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas074d19 AL775224 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas082k19 AL784208 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas123c24 AL955853 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas100p01 AL956385 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas127c02 AL961552 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas090d19 AL965912 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7541422 CX448028 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA021l04 CR570582 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu013f03 AL636690 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu012d21 AL639697 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu033g01 AL655843 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu035e17 AL656169 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu091p18 AL781407 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093c15 AL785380 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu096n11 AL787213 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu117b22 AL787380 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu136j13 AL789372 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu136e20 AL789608 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu086o22 AL791932 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu107e09 AL793204 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu129n22 AL798012 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu128d11 AL798094 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu097f05 AL801803 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu095o14 AL803566 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu102k15 AL805331 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu086i07 AL805551 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6993543 CF238250 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
THdA039p11 CR574101 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7536044 CX477354 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA024j23 BX711461 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7549006 CX484199 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575638 CX430568 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548429 CX490178 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5336524 BQ521877 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7552797 CX495620 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6992186 CF240972 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7546688 CX500335 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8889362 EL848718 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:5379355 BQ523409 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8859861 EL845398 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:6980156 CF148650 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8886226 EL843575 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:6977214 CF223842 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8886014 EL843133 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTpA025a22 BX723134 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8885177 EL841511 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xthr42I01 CN115042 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:6977729 CF224173 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977358 CF224775 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8857125 EL820457 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTpA019e04 BX713556 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA063f06 BX721896 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA037f05 BX720078 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7536405 CX477868 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA013l03 CR410100 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st47i05 DC178443 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st115j05 DC193370 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st112i03 DC195272 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA010b09 CR413152 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:5308326 BQ390769 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989435 CF218716 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13