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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (158) Proteins (45) Interactants (15) Wiki
XB-GENEPAGE-977890

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rpp40 - All

RefSeq mRNAs(3)
Models - Gene (30)
Models - mRNA (34)
mRNAs (6)
ESTs (54)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001078949 NM_001078949.1 ribonuclease P protein subunit p40 1279 bp NP_001072417 X. tropicalis
NM_001094165 NM_001094165.1 ribonuclease P/MRP 40kDa subunit L homeolog 1379 bp NP_001087634 X. laevis.L
XM_041565506 XM_041565506.1 XP_041421440.1 ribonuclease P/MRP 40kDa subunit L homeolog isoform X1 1362 bp XP_041421440 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g27587 X. laevis.L
NCBI 10.0 XBXT10g018049 X. tropicalis
ENSEMBL 10.0 rpp40 X. tropicalis
Xenbase 9.2 gene6610 X. laevis.L
JGI 9.1 Xelaev18031595m.g X. laevis.L
Xenbase 9.1 gene7780 X. tropicalis
ENSEMBL 9.1 rpp40 X. tropicalis
JGI 8.0 Xetrov14026890m.g X. tropicalis
JGI 7.2 Xelaev16067963m.g X. laevis.L
JGI 7.1 Xetro.F00827 X. tropicalis
JGI 6.0 XeXenL6RMv10025335m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000017617 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2110008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2110036 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2110037 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_211000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_211000036 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_211000037 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_211000014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2110125 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2110099 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2110003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2110020 X. tropicalis
JGI 4.1 gw1.211.128.1 X. tropicalis
JGI 4.1 gw1.211.3.1 X. tropicalis
JGI 4.1 gw1.211.101.1 X. tropicalis
JGI 4.1 e_gw1.211.3.1 X. tropicalis
JGI 4.1 e_gw1.211.128.1 X. tropicalis
JGI 4.1 e_gw1.211.101.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2110014 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA51769 X. laevis.L
ENSEMBL 10.0 ENSXETT00000038248 X. tropicalis
ENSEMBL 10.0 ENSXETT00000062234 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118828 X. tropicalis
NCBI 10.0 mRNA089141 X. tropicalis
Xenbase 9.2 rna19339 X. laevis.L
Xenbase 9.1 rna25058 X. tropicalis
JGI 9.1 Xelaev18031595m X. laevis.L
ENSEMBL 9.1 ENSXETT00000062234 X. tropicalis
ENSEMBL 9.1 ENSXETT00000038248 X. tropicalis
JGI 8.0 Xetrov14026890m X. tropicalis
JGI 7.2 Xelaev16067963m X. laevis.L
JGI 7.1 Xetro.F00827.1 X. tropicalis
JGI 7.1 Xetro.F00827.2 X. tropicalis
JGI 6.0 XeXenL6RMv10025335m X. laevis.L
JGI 4.1 fgenesh1_pm.C_scaffold_211000014 X. tropicalis
JGI 4.1 gw1.211.101.1 X. tropicalis
JGI 4.1 gw1.211.128.1 X. tropicalis
JGI 4.1 gw1.211.3.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_211000008 X. tropicalis
JGI 4.1 e_gw1.211.128.1 X. tropicalis
JGI 4.1 e_gw1.211.3.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000038248 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2110008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2110036 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2110037 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2110014 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2110020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2110003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2110099 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2110125 X. tropicalis
JGI 4.1 e_gw1.211.101.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_211000036 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_211000037 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7874122 BC121647 X. tropicalis
THdA042b18 CU025194 X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
NM_001078949 X. tropicalis
IMAGE:6863894 BC081021 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001094165 X. laevis.L
XM_041565506 X. laevis.L

ESTs (54)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8922240 EL836634 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7523452 CX473124 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA016j16 CR428979 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8917116 EL830653 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8940107 EL644154 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8934400 EL635909 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7756326 DR873764 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7743701 DN036664 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7603181 CX394416 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr34C09 CN109600 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
THdA042b18 CR584545 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:4439796 BG346843 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:9016831 EL864037 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8940107 EL644153 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:4439796 BG348677 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7523452 CX473123 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA042b18 CR584546 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr34C09 CN109599 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA053m07 BX739582 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7603181 CX394415 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7743701 DN036663 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7756326 DR873763 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8934400 EL635908 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8917116 EL830654 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9016831 EL864038 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8321502 DY574732 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL476c02ex BP694974 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL402n03ex BP678762 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL095l11 BJ071857 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xl319a21 DC128681 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl320a21 DC129000 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL046h04 BJ040426 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6327015 CA974414 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7981297 DR718562 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7981217 DR724291 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL098o01 BJ072531 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6326055 CA973722 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL071e17 BJ074742 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGp998I088088 BX848808 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:6863894 CA987288 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
PBX0098E05 AW640749 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0058C06 AW637408 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0094G01 AW640395 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0155H02 AW645760 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:7981217 DR724208 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:3401975 BE575948 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL098o01 BJ089542 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL071e17 BJ081327 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4781834 BM172475 3' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:3302095 BF072135 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL095l11 BJ088956 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL402n03ex BP715734 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl319a21 DC092965 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7981297 DR718534 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19