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Summary Expression Phenotypes Gene Literature (2) GO Terms (1) Nucleotides (120) Proteins (51) Interactants (27) Wiki
XB-GENEPAGE-977902

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hps1 - All

RefSeq mRNAs(9)
Models - Gene (18)
Models - mRNA (27)
mRNAs (10)
ESTs (37)

RefSeq mRNAs (9)

Accession Version name Length Protein Species
NM_001006902 NM_001006902. BLOC-3 complex member HPS1 3229 bp NP_001006903 X. tropicalis
XM_012966452 XM_012966452. Hermansky-Pudlak syndrome 1 protein isoform X1 3225 bp XP_012821906 X. tropicalis
XM_012966453 XM_012966453. Hermansky-Pudlak syndrome 1 protein isoform X1 3256 bp XP_012821907 X. tropicalis
XM_012966454 XM_012966454. Hermansky-Pudlak syndrome 1 protein isoform X1 3229 bp XP_012821908 X. tropicalis
XM_018227520 XM_018227520. Hermansky-Pudlak syndrome 1 protein homolog isoform X1 3090 bp XP_018083009 X. laevis.S
XM_018227521 XM_018227521. Hermansky-Pudlak syndrome 1 protein homolog isoform X1 3334 bp XP_018083010 X. laevis.S
XM_018227522 XM_018227522. Hermansky-Pudlak syndrome 1 protein homolog isoform X1 3527 bp XP_018083011 X. laevis.S
XM_018227523 XM_018227523. Hermansky-Pudlak syndrome 1 protein homolog isoform X1 3254 bp XP_018083012 X. laevis.S
XM_018227525 XM_018227525. Hermansky-Pudlak syndrome 1 protein homolog isoform X2 3199 bp XP_018083014 X. laevis.S

Models - Gene (18)

Source Version Model Species
NCBI 10.0 XBXT10g016375 X. tropicalis
NCBI 10.1 XBXL10_1g32782 X. laevis.S
ENSEMBL 10.0 hps1 X. tropicalis
JGI 9.1 Xelaev18037057m.g X. laevis.S
Xenbase 9.1 gene21693 X. tropicalis
Xenbase 9.2 gene47685 X. laevis.S
ENSEMBL 9.1 tvp23a X. tropicalis
JGI 7.1 Xetro.G00579 X. tropicalis
JGI 6.0 XeXenL6RMv10036125m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000018408 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2120007 X. tropicalis
JGI 4.1 e_gw1.212.68.1 X. tropicalis
JGI 4.1 gw1.212.68.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2120023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2120068 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2120036 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_212000036 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_212000007 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.0 mRNA081037 X. tropicalis
NCBI 10.1 XBmRNA61859 X. laevis.S
ENSEMBL 10.0 ENSXETT00000084606 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078129 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066829 X. tropicalis
JGI 9.1 Xelaev18037057m X. laevis.S
Xenbase 9.1 rna44309 X. tropicalis
Xenbase 9.2 rna92914 X. laevis.S
ENSEMBL 9.1 ENSXETT00000084606 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078129 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066829 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103919 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079976 X. tropicalis
ENSEMBL 9.1 ENSXETT00000039871 X. tropicalis
JGI 7.1 Xetro.G00579.1 X. tropicalis
JGI 7.1 Xetro.G00579.2 X. tropicalis
JGI 6.0 XeXenL6RMv10036125m X. laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_2120007 X. tropicalis
ENSEMBL 4.1 ENSXETT00000039866 X. tropicalis
ENSEMBL 4.1 ENSXETT00000039868 X. tropicalis
JGI 4.1 e_gw1.212.68.1 X. tropicalis
JGI 4.1 gw1.212.68.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2120023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2120068 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2120036 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_212000036 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_212000007 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
NM_001006902 X. tropicalis
IMAGE:6976532 BC075098 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
XM_012966454 X. tropicalis
XM_012966453 X. tropicalis
XM_012966452 X. tropicalis
XM_018227525 X. laevis.S
XM_018227523 X. laevis.S
XM_018227522 X. laevis.S
XM_018227521 X. laevis.S
XM_018227520 X. laevis.S

ESTs (37)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7687277 CX908892 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7749470 DN047137 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7799871 DN061409 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7804407 DR839674 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7611176 CX378403 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8961058 EL659697 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8913360 EL825352 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7696134 CX925857 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7709509 CX964563 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712482 CX969722 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7714918 CX974868 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7733375 DN017319 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:6976532 CF223064 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6993978 CF238040 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TTpA003d03 BX708545 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas049m24 AL649618 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7526612 CX443911 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8913360 EL825353 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7804407 DR839673 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7687277 CX908891 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7696134 CX925856 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7611176 CX378402 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7709509 CX964562 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712482 CX969721 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7714918 CX974867 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7733375 DN017318 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7749470 DN047136 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:6976532 CF223063 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTpA003d03 BX708546 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:6631636 BU906617 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6631954 BU906884 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL184c20 BJ618238 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL192m06 BJ620361 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8823375 EG577709 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:3381052 BI068166 3' X. laevis.S Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
XL184c20 BJ634774 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL192m06 BJ637003 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5