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Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (136) Proteins (81) Interactants (18) Wiki
XB-GENEPAGE-979368

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for fat3 - All

RefSeq mRNAs(18)
Models - Gene (33)
Models - mRNA (50)
mRNAs (18)
ESTs (16)

RefSeq mRNAs (18)

Accession Version name Length Protein Species
XM_031897339 XM_031897339. XP_031753199.1 protocadherin Fat 3 isoform X1 15525 bp XP_031753199 X. tropicalis
XM_031897340 XM_031897340. XP_031753200.1 protocadherin Fat 3 isoform X2 15489 bp XP_031753200 X. tropicalis
XM_031897341 XM_031897341. XP_031753201.1 protocadherin Fat 3 isoform X3 15465 bp XP_031753201 X. tropicalis
XM_031897342 XM_031897342. XP_031753202.1 protocadherin Fat 3 isoform X4 15455 bp XP_031753202 X. tropicalis
XM_031897343 XM_031897343. XP_031753203.1 protocadherin Fat 3 isoform X5 15428 bp XP_031753203 X. tropicalis
XM_031897344 XM_031897344. XP_031753204.1 protocadherin Fat 3 isoform X6 14243 bp XP_031753204 X. tropicalis
XM_041584585 XM_041584585. XP_041440519.1 protocadherin Fat 3 isoform X1 15489 bp XP_041440519 X. laevis.S
XM_041584586 XM_041584586. XP_041440520.1 protocadherin Fat 3 isoform X2 15429 bp XP_041440520 X. laevis.S
XM_041584587 XM_041584587. XP_041440521.1 protocadherin Fat 3 isoform X4 15393 bp XP_041440521 X. laevis.S
XM_018250357 XM_018250357. protocadherin Fat 3 isoform X3 15419 bp XP_018105846 X. laevis.S
XM_018250358 XM_018250358. protocadherin Fat 3 isoform X5 15323 bp XP_018105847 X. laevis.S
XM_018247785 XM_018247785. protocadherin Fat 3-like isoform X4 15478 bp XP_018103274 X. laevis.L
XM_018247788 XM_018247788. protocadherin Fat 3-like isoform X6 15383 bp XP_018103277 X. laevis.L
XM_041582698 XM_041582698. XP_041438632.1 protocadherin Fat 3-like isoform X1 15550 bp XP_041438632 X. laevis.L
XM_041582699 XM_041582699. XP_041438633.1 protocadherin Fat 3-like isoform X1 15543 bp XP_041438633 X. laevis.L
XM_041582700 XM_041582700. XP_041438634.1 protocadherin Fat 3-like isoform X2 15514 bp XP_041438634 X. laevis.L
XM_041582701 XM_041582701. XP_041438635.1 protocadherin Fat 3-like isoform X3 15493 bp XP_041438635 X. laevis.L
XM_041582702 XM_041582702. XP_041438636.1 protocadherin Fat 3-like isoform X5 15455 bp XP_041438636 X. laevis.L

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g002888 X. tropicalis
NCBI 10.1 XBXL10_1g11102 X. laevis.S
NCBI 10.1 XBXL10_1g8526 X. laevis.L
ENSEMBL 10.0 fat3 X. tropicalis
JGI 9.1 Xelaev18016333m.g X. laevis.S
Xenbase 9.1 gene28561 X. tropicalis
Xenbase 9.2 gene35010 X. laevis.S
ENSEMBL 9.1 fat3 X. tropicalis
JGI 7.1 Xetro.B02068 X. tropicalis
JGI 6.0 XeXenL6RMv10006070m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000017133 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5700002 X. tropicalis
JGI 4.1 e_gw1.570.25.1 X. tropicalis
JGI 4.1 e_gw1.570.47.1 X. tropicalis
JGI 4.1 e_gw1.570.52.1 X. tropicalis
JGI 4.1 e_gw1.570.53.1 X. tropicalis
JGI 4.1 e_gw1.570.54.1 X. tropicalis
JGI 4.1 e_gw1.570.55.1 X. tropicalis
JGI 4.1 e_gw1.570.70.1 X. tropicalis
JGI 4.1 gw1.570.25.1 X. tropicalis
JGI 4.1 gw1.570.52.1 X. tropicalis
JGI 4.1 gw1.570.53.1 X. tropicalis
JGI 4.1 gw1.570.55.1 X. tropicalis
JGI 4.1 gw1.570.70.1 X. tropicalis
JGI 4.1 gw1.570.47.1 X. tropicalis
JGI 4.1 gw1.570.54.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5700012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700052 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5700016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_570000016 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_570000002 X. tropicalis

mRNAs based on gene models(50)

Source Version Model Species
NCBI 10.0 mRNA014660 X. tropicalis
NCBI 10.1 XBmRNA16120 X. laevis.L
NCBI 10.1 XBmRNA20867 X. laevis.S
ENSEMBL 10.0 ENSXETT00000083957 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094566 X. tropicalis
ENSEMBL 10.0 ENSXETT00000037343 X. tropicalis
ENSEMBL 10.0 ENSXETT00000073431 X. tropicalis
JGI 9.1 Xelaev18016333m X. laevis.S
Xenbase 9.1 rna55267 X. tropicalis
Xenbase 9.2 rna74769 X. laevis.S
ENSEMBL 9.1 ENSXETT00000072175 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100661 X. tropicalis
ENSEMBL 9.1 ENSXETT00000037343 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088700 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073431 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094566 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083957 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074901 X. tropicalis
JGI 7.1 Xetro.B02068.2 X. tropicalis
JGI 7.1 Xetro.B02068.1 X. tropicalis
JGI 6.0 XeXenL6RMv10006070m X. laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_5700002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037345 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037341 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037342 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037343 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037346 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037348 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037349 X. tropicalis
JGI 4.1 e_gw1.570.25.1 X. tropicalis
JGI 4.1 e_gw1.570.47.1 X. tropicalis
JGI 4.1 e_gw1.570.52.1 X. tropicalis
JGI 4.1 e_gw1.570.53.1 X. tropicalis
JGI 4.1 e_gw1.570.54.1 X. tropicalis
JGI 4.1 e_gw1.570.55.1 X. tropicalis
JGI 4.1 e_gw1.570.70.1 X. tropicalis
JGI 4.1 gw1.570.25.1 X. tropicalis
JGI 4.1 gw1.570.52.1 X. tropicalis
JGI 4.1 gw1.570.53.1 X. tropicalis
JGI 4.1 gw1.570.55.1 X. tropicalis
JGI 4.1 gw1.570.70.1 X. tropicalis
JGI 4.1 gw1.570.47.1 X. tropicalis
JGI 4.1 gw1.570.54.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5700012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700052 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5700016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_570000016 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_570000002 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
XM_031897344 X. tropicalis
XM_031897343 X. tropicalis
XM_031897342 X. tropicalis
XM_031897341 X. tropicalis
XM_031897340 X. tropicalis
XM_031897339 X. tropicalis
XM_018250358 X. laevis.S
XM_018250357 X. laevis.S
XM_041584587 X. laevis.S
XM_041584586 X. laevis.S
XM_041584585 X. laevis.S
XM_041582702 X. laevis.L
XM_041582701 X. laevis.L
XM_041582700 X. laevis.L
XM_041582699 X. laevis.L
XM_041582698 X. laevis.L
XM_018247788 X. laevis.L
XM_018247785 X. laevis.L

ESTs (16)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7648145 CX807225 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649929 CX810003 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650161 CX810621 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650789 CX811968 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7656323 CX826923 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
CAAN12049 CX928418 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8956557 EL660736 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:5382772 BQ394201 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7642944 CX797850 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648269 CX807091 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642944 CX797849 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650161 CX810620 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650789 CX811967 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7656323 CX826922 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
CAAN12049 CX928417 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:5382772 BQ394200 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19