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Summary Expression Phenotypes Gene Literature (1) GO Terms (3) Nucleotides (92) Proteins (40) Interactants (69) Wiki
XB-GENEPAGE-982585

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cln6 - All

RefSeq mRNAs(5)
Models - Gene (24)
Models - mRNA (25)
mRNAs (7)
ESTs (23)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001126758 NM_001126758.1 ceroid-lipofuscinosis neuronal protein 6 2448 bp NP_001120230 X. tropicalis
XM_018255235 XM_018255235.2 ceroid-lipofuscinosis neuronal protein 6 homolog isoform X1 1748 bp XP_018110724 X. laevis.S
XM_018255236 XM_018255236.2 ceroid-lipofuscinosis neuronal protein 6 homolog isoform X2 1620 bp XP_018110725 X. laevis.S
XM_018253320 XM_018253320.2 ceroid-lipofuscinosis neuronal protein 6 homolog isoform X1 2416 bp XP_018108809 X. laevis.L
XM_041586906 XM_041586906.1 XP_041442840.1 ceroid-lipofuscinosis neuronal protein 6 homolog isoform X2 2227 bp XP_041442840 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g15529 X. laevis.S
NCBI 10.1 XBXL10_1g13439 X. laevis.L
NCBI 10.0 XBXT10g017991 X. tropicalis
ENSEMBL 10.0 cln6 X. tropicalis
Xenbase 9.2 gene1528 X. laevis.L
Xenbase 9.2 gene18824 X. laevis.S
JGI 9.1 Xelaev18018464m.g X. laevis.L
JGI 9.1 Xelaev18020417m.g X. laevis.S
Xenbase 9.1 gene18143 X. tropicalis
ENSEMBL 9.1 cln6 X. tropicalis
JGI 7.2 Xelaev16047528m.g X. laevis.S
JGI 7.1 Xetro.C00562 X. tropicalis
JGI 6.0 XeXenL6RMv10004027m.g X. laevis.S
JGI 4.1 estExt_fgenesh1_kg.C_400006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_400010 X. tropicalis
JGI 4.1 gw1.40.51.1 X. tropicalis
JGI 4.1 gw1.40.201.1 X. tropicalis
JGI 4.1 gw1.40.116.1 X. tropicalis
JGI 4.1 e_gw1.40.201.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_40000006 X. tropicalis
JGI 4.1 e_gw1.40.116.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_40000013 X. tropicalis
JGI 4.1 e_gw1.40.51.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_400013 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.1 XBmRNA25505 X. laevis.L
NCBI 10.1 XBmRNA29021 X. laevis.S
NCBI 10.0 mRNA088849 X. tropicalis
ENSEMBL 10.0 ENSXETT00000064168 X. tropicalis
Xenbase 9.2 rna4435 X. laevis.L
Xenbase 9.2 rna54945 X. laevis.S
ENSEMBL 9.1 ENSXETT00000064168 X. tropicalis
Xenbase 9.1 rna38726 X. tropicalis
JGI 9.1 Xelaev18020417m X. laevis.S
JGI 9.1 Xelaev18018464m X. laevis.L
ENSEMBL 9.1 ENSXETT00000066618 X. tropicalis
JGI 7.2 Xelaev16047528m X. laevis.S
JGI 7.1 Xetro.C00562.1 X. tropicalis
JGI 6.0 XeXenL6RMv10004027m X. laevis.S
JGI 4.1 gw1.40.201.1 X. tropicalis
JGI 4.1 e_gw1.40.201.1 X. tropicalis
JGI 4.1 e_gw1.40.51.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_400006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_400013 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_400010 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_40000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_40000013 X. tropicalis
JGI 4.1 gw1.40.116.1 X. tropicalis
JGI 4.1 e_gw1.40.116.1 X. tropicalis
JGI 4.1 gw1.40.51.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7551687 BC160405 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
NM_001126758 X. tropicalis
XM_018255236 X. laevis.S
IMAGE:8076511 BC155965 X. laevis.S
XM_041586906 X. laevis.L
XM_018255235 X. laevis.S
XM_018253320 X. laevis.L

ESTs (23)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8958583 EL662913 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
TGas143l20 AL964466 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7522687 CX471497 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551687 CX511255 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr10C20 CN095660 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA043e11 BX720867 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7639034 CX384833 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603829 CX395155 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584808 CX415958 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8863375 EL710943 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8947319 EG654405 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
TTbA046g07 CR425859 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7584808 CX415957 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7639034 CX384832 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr10C20 CN095659 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:4462253 BG885396 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7603829 CX395154 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas143l20 BX760482 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7522687 CX471496 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA043e11 BX720868 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7551687 CX511254 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
PBX0146A11 AW644932 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6630773 BU905850 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10