Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (8) GO Terms (23) Nucleotides (105) Proteins (65) Interactants (275) Wiki
XB-GENEPAGE-983683

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cbfa2t3 - All

RefSeq mRNAs(7)
Models - Gene (27)
Models - mRNA (42)
mRNAs (9)
ESTs (10)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
XM_002933656 XM_002933656.5 protein CBFA2T3 isoform X1 3098 bp XP_002933702 X. tropicalis
XM_004913578 XM_004913578.4 protein CBFA2T3 isoform X3 2465 bp XP_004913635 X. tropicalis
XM_012962285 XM_012962285.3 protein CBFA2T3 isoform X2 3099 bp XP_012817739 X. tropicalis
XM_012962287 XM_012962287.3 protein CBFA2T3 isoform X4 2136 bp XP_012817741 X. tropicalis
XM_012962288 XM_012962288.3 protein CBFA2T3 isoform X5 2102 bp XP_012817742 X. tropicalis
NM_001171986 NM_001171986.1 protein CBFA2T1 2087 bp NP_001165457 X. laevis.L
NM_001171987 NM_001171987.1 CBFA2/RUNX1 translocation partner 3 S homeolog 3429 bp NP_001165458 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g18659 X. laevis.L
NCBI 10.1 XBXL10_1g21246 X. laevis.S
NCBI 10.0 XBXT10g014008 X. tropicalis
ENSEMBL 10.0 cbfa2t3 X. tropicalis
Xenbase 9.2 gene10667 X. laevis.S
Xenbase 9.2 gene17099 X. laevis.L
JGI 9.1 Xelaev18024863m.g X. laevis.S
JGI 9.1 Xelaev18003581m.g X. laevis.L
Xenbase 9.1 gene21065 X. tropicalis
ENSEMBL 9.1 cbfa2t3 X. tropicalis
JGI 8.0 Xetrov14018596m.g X. tropicalis
JGI 7.2 Xelaev16000273m.g X. laevis.L
JGI 7.1 Xetro.D00750 X. tropicalis
JGI 6.0 XeXenL6RMv10019544m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000011259 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_660043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_660235 X. tropicalis
JGI 4.1 estExt_Genewise1.C_660074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_660073 X. tropicalis
JGI 4.1 e_gw1.66.73.1 X. tropicalis
JGI 4.1 gw1.66.73.1 X. tropicalis
JGI 4.1 gw1.66.235.1 X. tropicalis
JGI 4.1 e_gw1.66.235.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_660037 X. tropicalis
JGI 4.1 e_gw1.66.74.1 X. tropicalis
JGI 4.1 gw1.66.74.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_66000044 X. tropicalis

mRNAs based on gene models(42)

Source Version Model Species
NCBI 10.1 XBmRNA39320 X. laevis.S
NCBI 10.1 XBmRNA34328 X. laevis.L
ENSEMBL 10.0 ENSXETT00000085321 X. tropicalis
ENSEMBL 10.0 ENSXETT00000101782 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070261 X. tropicalis
NCBI 10.0 mRNA069324 X. tropicalis
ENSEMBL 10.0 ENSXETT00000024589 X. tropicalis
ENSEMBL 10.0 ENSXETT00000097514 X. tropicalis
Xenbase 9.2 rna49952 X. laevis.L
Xenbase 9.2 rna30992 X. laevis.S
ENSEMBL 9.1 ENSXETT00000099235 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101782 X. tropicalis
JGI 9.1 Xelaev18003581m X. laevis.L
Xenbase 9.1 rna43244 X. tropicalis
JGI 9.1 Xelaev18024863m X. laevis.S
ENSEMBL 9.1 ENSXETT00000024589 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070261 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078888 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085321 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090304 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091028 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097514 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098283 X. tropicalis
JGI 8.0 Xetrov14018596m X. tropicalis
JGI 7.2 Xelaev16000273m X. laevis.L
JGI 7.1 Xetro.D00750.3 X. tropicalis
JGI 7.1 Xetro.D00750.1 X. tropicalis
JGI 7.1 Xetro.D00750.2 X. tropicalis
JGI 6.0 XeXenL6RMv10019544m X. laevis.L
JGI 4.1 estExt_Genewise1.C_660235 X. tropicalis
JGI 4.1 estExt_Genewise1.C_660074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_660073 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_660037 X. tropicalis
JGI 4.1 e_gw1.66.235.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_660043 X. tropicalis
ENSEMBL 4.1 ENSXETT00000024589 X. tropicalis
JGI 4.1 e_gw1.66.74.1 X. tropicalis
JGI 4.1 gw1.66.235.1 X. tropicalis
JGI 4.1 e_gw1.66.73.1 X. tropicalis
JGI 4.1 gw1.66.73.1 X. tropicalis
JGI 4.1 gw1.66.74.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_66000044 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
XM_002933656 X. tropicalis
XM_004913578 X. tropicalis
XM_012962285 X. tropicalis
XM_012962287 X. tropicalis
XM_012962288 X. tropicalis
AY714078 X. laevis.L
NM_001171986 X. laevis.L
AY714079 X. laevis.S
NM_001171987 X. laevis.S

ESTs (10)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7661484 CX843447 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
xthr42E03 CN115001 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7641006 CX794295 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
xthr16H13 CN099706 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7661484 CX843446 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
cbfa2t3-791 CA790039 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL185m19 BJ618609 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
cbfa2t3-751 BE576204 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
XL082a01 BJ065108 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL082a01 BJ082702 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25