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Summary Expression Phenotypes Gene Literature (0) GO Terms (7) Nucleotides (177) Proteins (45) Interactants (35) Wiki
XB-GENEPAGE-984923

Show:     All X. tropicalis X. laevis

Nucleotide sequences for zmat5 - All

RefSeq mRNAs(5)
Models - Gene (20)
Models - mRNA (23)
mRNAs (10)
ESTs (89)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001171821 NM_001171821.1 zinc finger matrin-type protein 5 742 bp NP_001165292 X. tropicalis
XM_018091923 XM_018091923.1 zinc finger matrin-type protein 5 isoform X1 2076 bp XP_017947412 X. tropicalis
NM_001093865 NM_001093865.3 zinc finger, matrin-type 5 L homeolog 767 bp NP_001087334 X. laevis.L
NM_001171822 NM_001171822.1 zinc finger, matrin-type 5 S homeolog 617 bp NP_001165293 X. laevis.S
XM_018232345 XM_018232345.2 zinc finger, matrin-type 5 S homeolog isoform X1 840 bp XP_018087834 X. laevis.S

Models - Gene (20)

Source Version Model Species
NCBI 10.1 XBXL10_1g5123 X. laevis.S
NCBI 10.1 XBXL10_1g2504 X. laevis.L
NCBI 10.0 XBXT10g007236 X. tropicalis
ENSEMBL 10.0 zmat5 X. tropicalis
Xenbase 9.2 gene16428 X. laevis.S
Xenbase 9.2 gene19675 X. laevis.L
JGI 9.1 Xelaev18007414m.g X. laevis.L
JGI 9.1 Xelaev18010358m.g X. laevis.S
Xenbase 9.1 gene5605 X. tropicalis
ENSEMBL 9.1 zmat5 X. tropicalis
JGI 7.2 Xelaev16037418m.g X. laevis.L
JGI 7.2 Xelaev16033446m.g X. laevis.S
JGI 7.1 Xetro.A01030 X. tropicalis
JGI 6.0 XeXenL6RMv10002990m.g X. laevis.L
JGI 6.0 XeXenL6RMv10007905m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000024785 X. tropicalis
JGI 4.1 e_gw1.91.287.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910287 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_910018 X. tropicalis
JGI 4.1 gw1.91.287.1 X. tropicalis

mRNAs based on gene models(23)

Source Version Model Species
NCBI 10.1 XBmRNA9532 X. laevis.S
NCBI 10.1 XBmRNA4358 X. laevis.L
ENSEMBL 10.0 ENSXETT00000053339 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095002 X. tropicalis
NCBI 10.0 mRNA035868 X. tropicalis
Xenbase 9.2 rna57504 X. laevis.L
Xenbase 9.2 rna47980 X. laevis.S
Xenbase 9.1 rna18171 X. tropicalis
JGI 9.1 Xelaev18010358m X. laevis.S
JGI 9.1 Xelaev18007414m X. laevis.L
ENSEMBL 9.1 ENSXETT00000095002 X. tropicalis
ENSEMBL 9.1 ENSXETT00000053339 X. tropicalis
JGI 7.2 Xelaev16033446m X. laevis.S
JGI 7.2 Xelaev16037418m X. laevis.L
JGI 7.1 Xetro.A01030.2 X. tropicalis
JGI 7.1 Xetro.A01030.1 X. tropicalis
JGI 6.0 XeXenL6RMv10002990m X. laevis.L
JGI 6.0 XeXenL6RMv10007905m X. laevis.S
JGI 4.1 gw1.91.287.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_910018 X. tropicalis
JGI 4.1 e_gw1.91.287.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053339 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910287 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:7028390 BC077022 X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7598420 BC135135 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001171821 X. tropicalis
XM_018091923 X. tropicalis
IMAGE:6937601 BC078573 X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
CK799599 X. laevis.L
NM_001093865 X. laevis.L
IMAGE:3748949 BC089085 X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
NM_001171822 X. laevis.S
XM_018232345 X. laevis.S

ESTs (89)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7533921 CX427300 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7607558 CX368162 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620469 CX340831 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA060b01 CR424038 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st72h10 DC184557 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8863301 EL712539 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7028390 CF781159 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr41D12 CN114840 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8922915 EL672475 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TNeu009b16 AL635042 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu050p06 AL661977 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu105j11 AL786271 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6993028 CF264342 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8915931 EL828633 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7652596 CX815587 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas002p12 AL595257 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas034e03 AL649042 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas050c21 AL649650 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas135n08 AL958141 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7552507 CX494941 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7598420 CX387931 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st24e05 DC170048 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st25e05 DC170306 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st70h10 DC184045 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7552507 CX494940 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7652596 CX815586 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8922915 EL672474 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7598420 CX387930 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst70h10 DC153871 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst92c07 DC159374 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs25O01 CN085181 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:5380001 BQ524392 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
rst24e05 DC139883 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7607558 DR894474 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6993028 CF264343 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7620469 CX340830 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA060b01 CR424039 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr41D12 CN114839 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8915931 EL828634 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8863301 EL712538 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
TGas135n08 BX758845 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7533921 CX427299 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6322504 CA971205 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XENOPUS_SOURCE_ID:xlnoc002k06 AW199800 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XENOPUS_SOURCE_ID:xlnoc002n21 AW199857 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0015H01 AW634085 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0071E02 AW638555 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0135B03 AW643981 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3744880 BF426827 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3381359 BF047979 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGp998D069033 BX844603 5' X. laevis.L Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
XL152p03 BJ096182 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL164j15 BJ613631 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL164l05 BJ613651 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL165l05 BJ613911 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL166h18 BJ614076 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3748949 BF614907 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
xl272n05 DC115541 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl273n05 DC115793 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL443m14ex BP683707 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL479h15ex BP696126 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL514n04ex BP705411 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk57j06ex DC034874 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk132f10ex DC046006 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk146g07ex DC050572 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
p4c5 AU244647 5' X. laevis.L Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13
p11b9-2 AU245090 5' X. laevis.L Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13
p15h3 AU245297 5' X. laevis.L Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13
XL039e20 BJ037060 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6937601 CD101239 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
rxlk146g07ex DC017248 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk132f10ex DC012824 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk57j06ex DC002044 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL479h15ex BP729909 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL443m14ex BP719762 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl273n05 DC080866 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl272n05 DC080611 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3748949 BG021694 3' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL166h18 BJ630742 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XENOPUS_SOURCE_ID:xlnoc002n21 AW198894 3' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL165l05 BJ630548 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL164l05 BJ630272 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL164j15 BJ630246 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL152p03 BJ100498 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL148e12 BJ098868 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3381359 BF049036 3' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
XENOPUS_SOURCE_ID:xlnoc002k06 AW198834 3' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3744880 BG159986 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
XL039e20 BJ053556 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15