Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (4) GO Terms (25) Nucleotides (96) Proteins (53) Interactants (142) Wiki
XB-GENEPAGE-986000

Show:     All X. tropicalis X. laevis

Nucleotide sequences for tfec - All

RefSeq mRNAs(10)
Models - Gene (22)
Models - mRNA (29)
mRNAs (10)
ESTs (20)

RefSeq mRNAs (10)

Accession Version Protein Name Length Protein Species
XM_002934967 XM_002934967.5 transcription factor EC isoform X1 2895 bp XP_002935013 X. tropicalis
XM_004912982 XM_004912982.4 transcription factor EC isoform X2 2826 bp XP_004913039 X. tropicalis
XM_018092286 XM_018092286.2 transcription factor EC isoform X4 2906 bp XP_017947775 X. tropicalis
XM_031898969 XM_031898969.1 XP_031754829.1 transcription factor EC isoform X3 2849 bp XP_031754829 X. tropicalis
XM_041588540 XM_041588540.1 XP_041444474.1 transcription factor EC isoform X1 2278 bp XP_041444474 X. laevis.S
XM_041588541 XM_041588541.1 XP_041444475.1 transcription factor EC isoform X2 2317 bp XP_041444475 X. laevis.S
XM_041588542 XM_041588542.1 XP_041444476.1 transcription factor EC isoform X3 2049 bp XP_041444476 X. laevis.S
XM_018252556 XM_018252556.2 transcription factor EC isoform X1 3108 bp XP_018108045 X. laevis.L
XM_018252557 XM_018252557.2 transcription factor EC isoform X2 3271 bp XP_018108046 X. laevis.L
XM_018252558 XM_018252558.1 transcription factor EC isoform X3 2909 bp XP_018108047 X. laevis.L

Models - Gene (22)

Source Version Model Species
NCBI 10.1 XBXL10_1g12675 X. laevis.L
NCBI 10.1 XBXL10_1g16173 X. laevis.S
NCBI 10.0 XBXT10g013324 X. tropicalis
ENSEMBL 10.0 tfec X. tropicalis
JGI 9.1 Xelaev18017634m.g X. laevis.L
JGI 9.1 Xelaev18021079m.g X. laevis.S
Xenbase 9.1 gene5303 X. tropicalis
ENSEMBL 9.1 tfec X. tropicalis
JGI 7.1 Xetro.C01819 X. tropicalis
JGI 6.0 XeXenL6RMv10009631m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000011566 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_121000005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_121000001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1210005 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1210001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1210022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1210020 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1210002 X. tropicalis
JGI 4.1 e_gw1.121.22.1 X. tropicalis
JGI 4.1 gw1.121.22.1 X. tropicalis
JGI 4.1 gw1.121.20.1 X. tropicalis
JGI 4.1 e_gw1.121.20.1 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.1 XBmRNA30315 X. laevis.S
NCBI 10.1 XBmRNA23776 X. laevis.L
ENSEMBL 10.0 ENSXETT00000070892 X. tropicalis
ENSEMBL 10.0 ENSXETT00000117756 X. tropicalis
ENSEMBL 10.0 ENSXETT00000054425 X. tropicalis
NCBI 10.0 mRNA065895 X. tropicalis
JGI 9.1 Xelaev18017634m X. laevis.L
ENSEMBL 9.1 ENSXETT00000054425 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070892 X. tropicalis
Xenbase 9.1 rna17204 X. tropicalis
JGI 9.1 Xelaev18021079m X. laevis.S
JGI 7.1 Xetro.C01819.1 X. tropicalis
JGI 6.0 XeXenL6RMv10009631m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_121000005 X. tropicalis
JGI 4.1 gw1.121.20.1 X. tropicalis
JGI 4.1 gw1.121.22.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1210002 X. tropicalis
JGI 4.1 e_gw1.121.22.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025311 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025312 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054422 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054424 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054425 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1210001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1210005 X. tropicalis
JGI 4.1 e_gw1.121.20.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1210020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1210022 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_121000001 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
XM_002934967 X. tropicalis
XM_004912982 X. tropicalis
XM_018092286 X. tropicalis
XM_031898969 X. tropicalis
XM_041588540 X. laevis.S
XM_041588541 X. laevis.S
XM_041588542 X. laevis.S
XM_018252556 X. laevis.L
XM_018252557 X. laevis.L
XM_018252558 X. laevis.L

ESTs (20)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8886978 EL844446 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTbA025l07 CR415835 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA003j07 CR562584 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA030f16 CR579754 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7719544 CX983008 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA003j07 CR562585 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8886978 EL844447 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7719544 CX983007 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA030f16 CR579755 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA025l07 CR415836 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xlk60m02ex DC035866 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGp998P089552 BX850970 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4203895 BG553551 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL101h06 BJ073835 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xlk112p17ex DC039755 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL109h24 BJ090612 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk112p17ex DC006832 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:4203895 BG579351 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL101h06 BJ090085 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk60m02ex DC003006 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5