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Summary Expression Phenotypes Gene Literature (0) GO Terms (27) Nucleotides (110) Proteins (53) Interactants (44) Wiki
XB-GENEPAGE-990804

Show:     All X. tropicalis X. laevis

Nucleotide sequences for spart - All

RefSeq mRNAs(7)
Models - Gene (27)
Models - mRNA (33)
mRNAs (8)
ESTs (14)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001130255 NM_001130255.1 spartin 2621 bp NP_001123727 X. tropicalis
XM_012956537 XM_012956537.3 spartin isoform X2 5030 bp XP_012811991 X. tropicalis
XM_031895727 XM_031895727.1 XP_031751587.1 spartin isoform X1 4960 bp XP_031751587 X. tropicalis
XM_031895728 XM_031895728.1 XP_031751588.1 spartin isoform X2 4883 bp XP_031751588 X. tropicalis
XM_031895729 XM_031895729.1 XP_031751589.1 spartin isoform X3 1816 bp XP_031751589 X. tropicalis
XM_018247678 XM_018247678.2 spartin isoform X1 2494 bp XP_018103167 X. laevis.L
XM_041582638 XM_041582638.1 XP_041438572.1 spartin isoform X2 2132 bp XP_041438572 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g8365 X. laevis.L
NCBI 10.0 XBXT10g002380 X. tropicalis
ENSEMBL 10.0 spart X. tropicalis
Xenbase 9.2 gene11961 X. laevis.L
JGI 9.1 Xelaev18013705m.g X. laevis.L
Xenbase 9.1 gene1795 X. tropicalis
ENSEMBL 9.1 spart X. tropicalis
JGI 7.1 Xetro.B01763 X. tropicalis
JGI 6.0 XeXenL6RMv10000531m.g X. laevis.L
JGI 4.1 estExt_Genewise1.C_3230102 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3230001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3230002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3230003 X. tropicalis
JGI 4.1 e_gw1.323.79.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_323000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_323000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_323000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_323000001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3230001 X. tropicalis
JGI 4.1 e_gw1.323.102.1 X. tropicalis
JGI 4.1 e_gw1.323.94.1 X. tropicalis
JGI 4.1 gw1.323.102.1 X. tropicalis
JGI 4.1 gw1.323.79.1 X. tropicalis
JGI 4.1 gw1.323.94.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3230002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3230079 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3230094 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA15842 X. laevis.L
NCBI 10.0 mRNA012082 X. tropicalis
ENSEMBL 10.0 ENSXETT00000065037 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090065 X. tropicalis
ENSEMBL 10.0 ENSXETT00000065889 X. tropicalis
Xenbase 9.2 rna34743 X. laevis.L
ENSEMBL 9.1 ENSXETT00000065889 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090065 X. tropicalis
ENSEMBL 9.1 ENSXETT00000065037 X. tropicalis
Xenbase 9.1 rna5875 X. tropicalis
JGI 9.1 Xelaev18013705m X. laevis.L
JGI 7.1 Xetro.B01763.2 X. tropicalis
JGI 7.1 Xetro.B01763.1 X. tropicalis
JGI 7.1 Xetro.B01763.3 X. tropicalis
JGI 6.0 XeXenL6RMv10000531m X. laevis.L
JGI 4.1 gw1.323.102.1 X. tropicalis
JGI 4.1 gw1.323.79.1 X. tropicalis
JGI 4.1 gw1.323.94.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3230102 X. tropicalis
JGI 4.1 e_gw1.323.79.1 X. tropicalis
JGI 4.1 e_gw1.323.94.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3230001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3230002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3230003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3230001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3230002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3230079 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3230094 X. tropicalis
JGI 4.1 e_gw1.323.102.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_323000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_323000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_323000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_323000001 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7710162 BC167368 X. tropicalis NIH_XGC_tropInt1 intestine frog
NM_001130255 X. tropicalis
XM_012956537 X. tropicalis
XM_031895727 X. tropicalis
XM_031895728 X. tropicalis
XM_031895729 X. tropicalis
XM_018247678 X. laevis.L
XM_041582638 X. laevis.L

ESTs (14)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7710162 CX965822 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
CAAO4161 CX935057 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7688082 CX910946 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7717072 CX978278 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8863650 EL700398 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8908216 EL802471 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7688082 CX910945 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8863650 EL700397 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8908216 EL802472 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7710162 CX965821 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7717072 CX978277 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8823933 EG584429 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:3472444 BI313155 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGp998I0511704 BX846812 5' X. laevis.L Soares NXEG egg unfertilized egg stage