Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (3) GO Terms (2) Nucleotides (131) Proteins (57) Interactants (340) Wiki
XB-GENEPAGE-990977

Show:     All X. tropicalis X. laevis

Nucleotide sequences for matn4 - All

RefSeq mRNAs(12)
Models - Gene (28)
Models - mRNA (31)
mRNAs (13)
ESTs (32)

RefSeq mRNAs (12)

Accession Version Protein Name Length Protein Species
XM_002938014 XM_002938014.5 matrilin-4 isoform X1 4313 bp XP_002938060 X. tropicalis
XM_004918652 XM_004918652.4 matrilin-4 isoform X1 4315 bp XP_004918709 X. tropicalis
XM_004918653 XM_004918653.4 matrilin-4 isoform X2 4192 bp XP_004918710 X. tropicalis
XM_018234786 XM_018234786.2 matrilin-4 isoform X1 3692 bp XP_018090275 X. laevis.L
XM_018234787 XM_018234787.2 matrilin-4 isoform X1 3744 bp XP_018090276 X. laevis.L
XM_018234788 XM_018234788.2 matrilin-4 isoform X1 3768 bp XP_018090277 X. laevis.L
XM_018234789 XM_018234789.2 matrilin-4 isoform X1 3713 bp XP_018090278 X. laevis.L
XM_041576440 XM_041576440.1 XP_041432374.1 matrilin-4 isoform X1 3644 bp XP_041432374 X. laevis.L
XM_041576441 XM_041576441.1 XP_041432375.1 matrilin-2 isoform X2 3386 bp XP_041432375 X. laevis.L
XM_018238039 XM_018238039.2 matrilin-4 isoform X1 2690 bp XP_018093528 X. laevis.S
XM_018238040 XM_018238040.2 matrilin-4 isoform X2 2567 bp XP_018093529 X. laevis.S
XM_018238041 XM_018238041.2 matrilin-4 isoform X3 2570 bp XP_018093530 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g39080 X. laevis.L
NCBI 10.1 XBXL10_1g42314 X. laevis.S
NCBI 10.0 XBXT10g006519 X. tropicalis
ENSEMBL 10.0 matn4 X. tropicalis
Xenbase 9.2 gene4387 X. laevis.S
Xenbase 9.2 gene48277 X. laevis.L
JGI 9.1 Xelaev18046003m.g X. laevis.S
JGI 9.1 Xelaev18043243m.g X. laevis.L
Xenbase 9.1 gene7278 X. tropicalis
ENSEMBL 9.1 matn4 X. tropicalis
JGI 7.1 Xetro.J00728 X. tropicalis
JGI 6.0 XeXenL6RMv10034645m.g X. laevis.L
JGI 6.0 XeXenL6RMv10035599m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000022834 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340140 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3340035 X. tropicalis
JGI 4.1 gw1.334.39.1 X. tropicalis
JGI 4.1 gw1.334.23.1 X. tropicalis
JGI 4.1 gw1.334.20.1 X. tropicalis
JGI 4.1 gw1.334.143.1 X. tropicalis
JGI 4.1 gw1.334.1.1 X. tropicalis
JGI 4.1 e_gw1.334.39.1 X. tropicalis
JGI 4.1 e_gw1.334.23.1 X. tropicalis
JGI 4.1 e_gw1.334.20.1 X. tropicalis
JGI 4.1 e_gw1.334.143.1 X. tropicalis
JGI 4.1 e_gw1.334.1.1 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA73713 X. laevis.L
NCBI 10.1 XBmRNA79541 X. laevis.S
NCBI 10.0 mRNA032243 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106312 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070886 X. tropicalis
ENSEMBL 10.0 ENSXETT00000049389 X. tropicalis
Xenbase 9.2 rna93796 X. laevis.L
Xenbase 9.2 rna12782 X. laevis.S
ENSEMBL 9.1 ENSXETT00000049389 X. tropicalis
Xenbase 9.1 rna23529 X. tropicalis
JGI 9.1 Xelaev18046003m X. laevis.S
JGI 9.1 Xelaev18043243m X. laevis.L
ENSEMBL 9.1 ENSXETT00000070886 X. tropicalis
JGI 7.1 Xetro.J00728.1 X. tropicalis
JGI 6.0 XeXenL6RMv10035599m X. laevis.L
JGI 6.0 XeXenL6RMv10034645m X. laevis.L
JGI 4.1 gw1.334.1.1 X. tropicalis
JGI 4.1 e_gw1.334.143.1 X. tropicalis
JGI 4.1 e_gw1.334.20.1 X. tropicalis
JGI 4.1 e_gw1.334.23.1 X. tropicalis
JGI 4.1 e_gw1.334.39.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000049389 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3340035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3340140 X. tropicalis
JGI 4.1 e_gw1.334.1.1 X. tropicalis
JGI 4.1 gw1.334.143.1 X. tropicalis
JGI 4.1 gw1.334.20.1 X. tropicalis
JGI 4.1 gw1.334.23.1 X. tropicalis
JGI 4.1 gw1.334.39.1 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
XM_002938014 X. tropicalis
XM_004918652 X. tropicalis
XM_004918653 X. tropicalis
XM_041576441 X. laevis.L
XM_018234788 X. laevis.L
XM_018234787 X. laevis.L
XM_018238040 X. laevis.S
XM_018234786 X. laevis.L
XM_018238039 X. laevis.S
XM_041576440 X. laevis.L
XM_018234789 X. laevis.L
XM_018238041 X. laevis.S
IMAGE:4031327 BC072242 X. laevis.L

ESTs (32)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:5335994 BQ521093 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA048f10 CR426910 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
XZT10926 CX310857 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597040 CX337629 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7635271 CX338749 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7631941 CX397632 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO8469 CX956007 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8469 CX956006 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7625556 CX378618 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608475 CX409524 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5571847 BQ736589 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4970870 CF289722 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL098l18 BJ072484 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL108d20 BJ072885 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
AW871889 AW871889 5' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24
IMAGE:3549783 BG578894 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL092e19 BJ070928 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6875642 CB200531 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL068k15 BJ062654 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL076e03 BJ063425 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL076k11 BJ063557 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL040l09 BJ037500 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL032n24 BJ042788 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:8322123 DY547990 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:6937104 CD099273 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL076k11 BJ081732 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
AW782538 AW782538 3' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24
XL040l09 BJ052194 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6875642 CB564792 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL068k15 BJ080644 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL098l18 BJ089499 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL032n24 BJ056743 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15