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Summary Expression Phenotypes Gene Literature (1) GO Terms (0) Nucleotides (161) Proteins (70) Interactants (61) Wiki
XB-GENEPAGE-993504

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for gabpb1 - All

RefSeq mRNAs(7)
Models - Gene (31)
Models - mRNA (37)
mRNAs (18)
ESTs (34)

RefSeq mRNAs (7)

Accession Version name Length Protein Species
NM_001007483 NM_001007483. GA-binding protein subunit beta-1 2027 bp NP_001007484 X. tropicalis
XM_012958861 XM_012958861. GA-binding protein subunit beta-1 isoform X1 3936 bp XP_012814315 X. tropicalis
XM_012958862 XM_012958862. GA-binding protein subunit beta-1 isoform X2 3862 bp XP_012814316 X. tropicalis
XM_018253126 XM_018253126. GA-binding protein subunit beta-1 isoform X1 2253 bp XP_018108615 X. laevis.L
XM_018253127 XM_018253127. GA-binding protein subunit beta-1 isoform X2 2196 bp XP_018108616 X. laevis.L
XM_018254124 XM_018254124. GA binding protein transcription factor subunit beta 1 S homeolog isoform X1 2170 bp XP_018109613 X. laevis.S
NM_001100927 NM_001100927. GA binding protein transcription factor subunit beta 1 S homeolog 1388 bp NP_001094397 X. laevis.S

Models - Gene (31)

Source Version Model Species
NCBI 10.0 XBXT10g015160 X. tropicalis
NCBI 10.1 XBXL10_1g13240 X. laevis.L
NCBI 10.1 XBXL10_1g15696 X. laevis.S
ENSEMBL 10.0 gabpb1 X. tropicalis
JGI 9.1 Xelaev18018255m.g X. laevis.L
JGI 9.1 Xelaev18020598m.g X. laevis.S
Xenbase 9.1 gene5459 X. tropicalis
Xenbase 9.2 gene14131 X. laevis.L
Xenbase 9.2 gene5529 X. laevis.S
ENSEMBL 9.1 gabpb1 X. tropicalis
JGI 7.1 Xetro.C00615 X. tropicalis
JGI 7.2 Xelaev16078708m.g X. laevis.L
JGI 7.2 Xelaev16071424m.g X. laevis.S
JGI 6.0 XeXenL6RMv10003669m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000016116 X. tropicalis
JGI 4.1 e_gw1.511.68.1 X. tropicalis
JGI 4.1 e_gw1.511.59.1 X. tropicalis
JGI 4.1 e_gw1.511.69.1 X. tropicalis
JGI 4.1 e_gw1.511.71.1 X. tropicalis
JGI 4.1 gw1.511.59.1 X. tropicalis
JGI 4.1 gw1.511.68.1 X. tropicalis
JGI 4.1 gw1.511.69.1 X. tropicalis
JGI 4.1 gw1.511.71.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5110011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5110059 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5110071 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5110006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5110019 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_511000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_511000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_511000019 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.0 mRNA074970 X. tropicalis
NCBI 10.1 XBmRNA25106 X. laevis.L
NCBI 10.1 XBmRNA29320 X. laevis.S
ENSEMBL 10.0 ENSXETT00000035143 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105356 X. tropicalis
ENSEMBL 10.0 ENSXETT00000117971 X. tropicalis
ENSEMBL 10.0 ENSXETT00000035142 X. tropicalis
JGI 9.1 Xelaev18018255m X. laevis.L
JGI 9.1 Xelaev18020598m X. laevis.S
Xenbase 9.1 rna17690 X. tropicalis
Xenbase 9.2 rna41159 X. laevis.L
Xenbase 9.2 rna16190 X. laevis.S
ENSEMBL 9.1 ENSXETT00000035142 X. tropicalis
ENSEMBL 9.1 ENSXETT00000035143 X. tropicalis
JGI 7.1 Xetro.C00615.1 X. tropicalis
JGI 7.2 Xelaev16071424m X. laevis.S
JGI 7.2 Xelaev16078708m X. laevis.L
JGI 6.0 XeXenL6RMv10003669m X. laevis.L
JGI 4.1 e_gw1.511.68.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035143 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035142 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035140 X. tropicalis
JGI 4.1 e_gw1.511.59.1 X. tropicalis
JGI 4.1 e_gw1.511.69.1 X. tropicalis
JGI 4.1 e_gw1.511.71.1 X. tropicalis
JGI 4.1 gw1.511.59.1 X. tropicalis
JGI 4.1 gw1.511.68.1 X. tropicalis
JGI 4.1 gw1.511.69.1 X. tropicalis
JGI 4.1 gw1.511.71.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5110011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5110059 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5110071 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5110006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5110019 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_511000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_511000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_511000019 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
NM_001007483 X. tropicalis
TGas059e14 CR942557 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6976341 BC079923 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
XM_012958862 X. tropicalis
XM_012958861 X. tropicalis
XR_001924160 X. tropicalis
XR_001170161 X. tropicalis
beta1 X91242 X. laevis.L
betaE X91243 X. laevis.S
X91243 X91243 X. laevis.S
NM_001100927 X. laevis.S
IMAGE:9041587 BC169952 X. laevis.S
IMAGE:9041581 BC169946 X. laevis.S
XR_001934960 X. laevis.S
XM_018254124 X. laevis.S
XR_001934897 X. laevis.L
XM_018253127 X. laevis.L
XM_018253126 X. laevis.L

ESTs (34)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6976341 CF222879 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas059e14 AL674782 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu143j06 AL796203 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA046k13 BX732314 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7674586 CX885315 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7696254 CX925679 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7516586 DR831600 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7674586 CX885314 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:6976341 CF222878 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas059e14 BX748102 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XL216f13 BJ626897 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998L1910852 BX851363 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL409o09ex BP710295 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl330c19 DC132097 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL068j24 BJ062641 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL143b07 BJ093645 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL153n16 BJ096416 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL160b11 BJ612674 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL184o16 BJ618410 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL186f06 BJ618732 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4930338 BQ731514 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5514872 CF287149 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL050j21 BJ042088 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL014a19 BJ031613 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL021n20 BJ035359 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL184o16 BJ634973 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL216f13 BJ643249 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL409o09ex BP742124 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl330c19 DC096142 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL050j21 BJ055777 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL153n16 BJ100604 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL021n20 BJ049981 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL014a19 BJ046651 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL014b19 BJ046671 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15