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Summary Expression Phenotypes Gene Literature (28) GO Terms (11) Nucleotides (251) Proteins (61) Interactants (202) Wiki
XB-GENEPAGE-997351

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ndc80 - All

RefSeq mRNAs(6)
Models - Gene (33)
Models - mRNA (42)
mRNAs (10)
ESTs (119)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001011162 NM_001011162.1 kinetochore protein NDC80 homolog 2717 bp NP_001011162 X. tropicalis
XM_012954423 XM_012954423.3 kinetochore protein NDC80 homolog isoform X1 2676 bp XP_012809877 X. tropicalis
NM_001088903 NM_001088903.1 kinetochore protein NDC80 homolog 2201 bp NP_001082372 X. laevis.S
XM_018248137 XM_018248137.2 kinetochore protein NDC80 homolog isoform X1 2239 bp XP_018103626 X. laevis.S
NM_001096936 NM_001096936.1 NDC80 kinetochore complex component L homeolog 2253 bp NP_001090405 X. laevis.L
XM_018245384 XM_018245384.2 NDC80 kinetochore complex component L homeolog isoform X1 2337 bp XP_018100873 X. laevis.L

Models - Gene (33)

Source Version Model Species
NCBI 10.1 XBXL10_1g9245 X. laevis.S
NCBI 10.1 XBXL10_1g6093 X. laevis.L
NCBI 10.0 XBXT10g001459 X. tropicalis
ENSEMBL 10.0 ndc80 X. tropicalis
Xenbase 9.2 gene4271 X. laevis.L
Xenbase 9.2 gene10966 X. laevis.S
JGI 9.1 Xelaev18014436m.g X. laevis.S
JGI 9.1 Xelaev18011287m.g X. laevis.L
Xenbase 9.1 gene2469 X. tropicalis
ENSEMBL 9.1 ndc80 X. tropicalis
JGI 8.0 Xetrov14046927m.g X. tropicalis
JGI 7.2 Xelaev16026828m.g X. laevis.S
JGI 7.1 Xetro.K02248 X. tropicalis
JGI 6.0 XeXenL6RMv10023945m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000020840 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1250000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1250000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1250000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1250000003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_12500003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_12500005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_12500004 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_12500002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12500016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12500015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12500014 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_12500004 X. tropicalis
JGI 4.1 e_gw1.1250.15.1 X. tropicalis
JGI 4.1 e_gw1.1250.14.1 X. tropicalis
JGI 4.1 gw1.1250.16.1 X. tropicalis
JGI 4.1 gw1.1250.15.1 X. tropicalis
JGI 4.1 gw1.1250.14.1 X. tropicalis
JGI 4.1 e_gw1.1250.16.1 X. tropicalis

mRNAs based on gene models(42)

Source Version Model Species
NCBI 10.1 XBmRNA11385 X. laevis.L
NCBI 10.1 XBmRNA17264 X. laevis.S
NCBI 10.0 mRNA007356 X. tropicalis
ENSEMBL 10.0 ENSXETT00000045005 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083801 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092619 X. tropicalis
Xenbase 9.2 rna31888 X. laevis.S
Xenbase 9.2 rna12436 X. laevis.L
ENSEMBL 9.1 ENSXETT00000083801 X. tropicalis
Xenbase 9.1 rna8203 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092619 X. tropicalis
JGI 9.1 Xelaev18011287m X. laevis.L
ENSEMBL 9.1 ENSXETT00000045005 X. tropicalis
ENSEMBL 9.1 ENSXETT00000045008 X. tropicalis
JGI 9.1 Xelaev18014436m X. laevis.S
JGI 8.0 Xetrov14046927m X. tropicalis
JGI 7.2 Xelaev16026828m X. laevis.S
JGI 7.1 Xetro.K02248.1 X. tropicalis
JGI 7.1 Xetro.K02248.2 X. tropicalis
JGI 7.1 Xetro.K02248.3 X. tropicalis
JGI 7.1 Xetro.K02248.4 X. tropicalis
JGI 6.0 XeXenL6RMv10023945m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_1250000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1250000003 X. tropicalis
JGI 4.1 gw1.1250.14.1 X. tropicalis
JGI 4.1 gw1.1250.15.1 X. tropicalis
JGI 4.1 gw1.1250.16.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_12500004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_12500003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_12500005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_12500004 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_12500002 X. tropicalis
JGI 4.1 e_gw1.1250.14.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000045008 X. tropicalis
ENSEMBL 4.1 ENSXETT00000045005 X. tropicalis
JGI 4.1 e_gw1.1250.16.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12500014 X. tropicalis
JGI 4.1 e_gw1.1250.15.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12500015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12500016 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1250000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1250000004 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:6981324 BC084918 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
NM_001011162 X. tropicalis
XM_012954423 X. tropicalis
AY168013 X. laevis.S
IMAGE:6638107 BC070725 X. laevis.S
NM_001088903 X. laevis.S
XM_018248137 X. laevis.S
IMAGE:8329967 BC123352 X. laevis.L
NM_001096936 X. laevis.L
XM_018245384 X. laevis.L

ESTs (119)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7687140 CX908595 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7571049 CX511708 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu001l18 AL634449 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7518946 CX750866 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7513820 CX743487 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7513725 CX743178 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:6981324 CF222561 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6981324 CF222560 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989715 CF219500 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TTpA058f16 BX731881 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA029o04 CR581642 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu123l21 AL802138 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093i23 AL778907 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas017g08 AL629375 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas137b11 AL968783 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9017427 EL865316 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8891542 EL852118 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8919837 EL833635 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
CAAO9022 CX957042 5' X. tropicalis NIH_XGC_tropTe5 testis frog
st60l15 DC181588 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st60m15 DC181603 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st69o06 DC183906 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7526059 CX443250 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7698383 CX930459 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7539024 CX451969 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7691343 CX916285 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7563330 CX468327 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535367 CX475992 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu012e07 AL639529 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7564776 CX481351 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7687130 CX908872 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7556568 CX504592 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564776 CX481350 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas137b11 BX759900 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
rst60l15 DC151323 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst60m15 DC151338 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst69o06 DC153722 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7539024 CX451968 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563330 CX468326 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556568 CX504591 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571049 CX511707 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7513725 CX743177 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7513820 CX743486 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TNeu093i23 BX695758 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu123l21 BX702422 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA021p01 CR417740 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA058f16 BX731882 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7687140 CX908594 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687130 CX908871 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691343 CX916284 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7698383 CX930458 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO9022 CX957041 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8919837 EL833636 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8891542 EL852119 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xl273d01 DC115634 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3436351 BF615848 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
XL073l24 BJ061685 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL074f08 BJ061880 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xl276c20 DC116451 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL215g20 BJ626610 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL102o14 BJ067816 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL109e17 BJ073222 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL168h06 BJ614525 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl285e03 DC118976 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL156b06 BJ611726 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl296h01 DC122051 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl332f13 DC132771 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL036c20 BJ036374 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL150m24 BJ095586 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xlk62n08ex DC055132 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
PBX0123B08 AW642927 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0113B12 AW642033 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL447f18ex BP684890 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
PBX0089E02 AW639987 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:7976469 DR719240 5' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7981867 DR721327 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xlk144n07ex DC050070 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk119n13ex DC041923 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8320196 DY557520 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8319678 DY572375 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL401d14ex BP675576 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk145g09ex DC050252 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL447h14ex BP684929 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk58l13ex DC035227 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk59l13ex DC035541 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk103c03ex DC036622 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk62n08ex DC021729 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk59l13ex DC002682 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL447l10ex BP720892 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL447h14ex BP720823 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL447f18ex BP720786 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL401d14ex BP713043 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL087g07 BJ092466 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl273d01 DC080708 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl276c20 DC081500 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl285e03 DC084261 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl296h01 DC087229 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl332f13 DC096787 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL036c20 BJ051593 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15