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Gene/Clone	Species	Stage	Anatomy Item	Experimenter
prph	xenopus		head [+] lower eyelid,lens,retina,brain,forebrain,telencephalon,diencephalon,midbrain,hindbrain,midbrain-hindbrain boundary,hypophysis,ventricular zone,cranial ganglion,head mesoderm,ciliary marginal zone,head endoderm,pharyngeal arch,oral cavity,pineal gland,eye,cornea,globe,conjunctiva,sclera,iris,ciliary body,optic nerve,lens placode,choana,visceral pouch,pupil,posterior palatine artery,internal carotid artery,cerebral artery,ophthalmic artery,anterior palatine artery,external jugular vein,internal jugular vein,cranial nerve,tooth,tongue,gill primordium,choroid fissure,optic stalk,musculature of face,mouth,nostril,cranium,braincase and otic capsule skeleton,lower jaw,Meckel's cartilage,upper jaw,cerebellum,fourth ventricle,medulla oblongata,neurocranium,orbital region,olfactory region,occipital region,sphenoid region,otic region,oral epithelium,photoreceptor layer,retinal neural layer,retinal pigmented epithelium,retinal outer plexiform layer,retinal outer nuclear layer,optic fiber layer,retinal inner nuclear layer,inner limiting membrane,retinal ganglion cell layer,outer limiting membrane,retinal inner plexiform layer,optic tectum,craniofacial region,hypothalamus,optic chiasm,suprachiasmatic nucleus,rhombomere,lens epithelium,lens transitional zone,lens fiber cell mass,horizontal cell,bipolar neuron,amacrine cell,retinal ganglion cell,optic tract,eye photoreceptor cell,rhombic lip,head vasculature,retinal blood vessel,hyaloid blood vessel,cerebral vein,metencephalic artery,metencephalic vein,ophthalmic vein,vena capitis medialis,vena capitis lateralis,mesencephalic artery,mesencephalic vein,nasociliary artery,optic choroid vascular plexus,olfactory bulb,infundibulum,ventral tegmentum,dorsal tegmentum,anterior hypothalamus,posterior hypothalamus,lateral ganglionic eminence,mandibular artery,maxillary artery,facial vein,subpallium,medial ganglionic eminence,pharyngeal pouch,pharyngeal region,midbrain tegmentum,eminentia thalami,pallium,pretectum,prethalamus,zona limitans intrathalamica,thalamus,head mesenchyme,cranial muscle,processus retroarticularis of Meckel's cartilage,branchial basket,retinal stem cell region,retinal progenitor cell region,oculomotor motornucleus,dorsal thalamus,trochlear motornucleus,hatching gland primordium,central retina,peripheral retina,choroid,circumpharyngeal ridge,pharyngeal endoderm,retinal stem cell,retinal progenitor cell,anterior tectum,posterior tectum,pharyngeal mesenchyme,accessory olfactory bulb,amygdala,anterior amygdala,anterior commissure,anterior entopeduncular nucleus,anterior thalamic nucleus,anterodorsal tegmental nucleus,anteroventral tegmental nucleus,basal forebrain,basal ganglion,bed nucleus of the stria terminalis,central amygdala,central nucleus of the thalamus,dorsal column nucleus,dorsal habenular nucleus,dorsal pallidum,dorsal pallium,dorsal septum,external plexiform layer of the olfactory bulb,glomerular layer of the olfactory bulb,granule cell,granule cell layer of the cerebellum,granule cell layer of the olfactory bulb,habenula,isthmic nucleus,lateral amygdala,lateral forebrain bundle,lateral hypothalamic nucleus,lateral pallium,lateral septum,laterodorsal tegmental nucleus,locus coeruleus,magnocellular preoptic nucleus,medial amygdala,medial pallium,medial septum,mitral cell,mitral cell layer of the olfactory bulb,nucleus accumbens,nucleus of the diagonal band,pallidum,posterior commissure,posterodorsal tegmental nucleus,posteroventral tegmental nucleus,preoptic area,raphe nucleus,telencephalon septum,solitary tract,striatum,subcommissural organ,subthalamic nucleus,torus semicircularis,ventral habenular nucleus,ventral hypothalamic nucleus,ventral pallidum,ventral pallium,ventrolateral thalamic nucleus,ventromedial thalamic nucleus,prosomere,prosomere 4,prosomere 5,prosomere 6,brain ventricle,mammilary region,tuberal region,third ventricle,Muller cell,forebrain-midbrain boundary,ventricular layer of the optic tectum,neuropil of the optic tectum,cell body layer of the optic tectum,radial glial cell,neural stem cell,Mauthner cell,caudal tuberal region,rostral tuberal region,nucleus of the solitary tract,prethalamus basal plate,retromammillary area,nucleus reticularis medialis,nucleus reticularis superior,nucleus reticularis inferior,ventral septum,supraoptoparaventricular region,stria terminalis,optic disc,anterior entopeduncular region,astrocyte,oval window,oligodendrocyte,astrocyte end-foot,melanotrope,adenohypophysis,neurohypophysis,pars distalis,pars nervosa,pars intermedia,ethmoid bone,ethmoid region,lateral nasal prominence,medial nasal prominence,otic capsule,dorsal telencephalon,pial cell,pia mater,cephalic nerve,prootic bone,roof of mouth,intercanthal region,amygdala,anterior amygdala,anterior entopeduncular nucleus,anterior tectum,astrocyte end-foot,basal ganglion,bed nucleus of the stria terminalis,cell body layer of the optic tectum,central amygdala,choana,dorsal pallidum,dorsal septum,hatching gland cell,lateral amygdala,lateral septum,lens epithelium,lens fiber cell mass,lens transitional zone,medial amygdala,medial septum,neuropil of the optic tectum,nostril,nucleus accumbens,nucleus of the diagonal band,pallidum,pars nervosa,posterior tectum,radial glial cell,striatum,subthalamic nucleus,telencephalon septum,ventral pallidum,ventral septum,ventricular layer of the optic tectum,Stirnorgan,amygdala,anterior palatine artery,astrocyte,astrocyte end-foot,basal forebrain,basal ganglion,cerebral artery,cranial muscle,cranial muscle primordium,external gill,gill primordium,hatching gland,lens,m. cucullaris,m. depressor mandibulae,m. levator scapulae inferior,m. levator scapulae superior,m. petrohyoideus,nasal region,neurohypophysis,nucleus of the diagonal band,oligodendrocyte,optic nerve,optic tectum,pallidum,parotic crest,pharyngeal pouch,radial glial cell,striatum,taste bud,telencephalon septum

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Expression summary for prph

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Experiment	Species	Images	Stages	Anatomy	Assay
	laevis	1 image	NF stage 37 and 38	facial nerve, glossopharyngeal nerve, hindbrain, trigeminal nerve, vagus nerve	immunohistochemistry
Paper	xenopus	1 image	NF stage 39 to NF stage 40	brain, rhombomere	in situ hybridization
hnRNP K post-transcriptionally co-regulates multiple cytoskeletal genes needed for axonogenesis.	laevis	1 image	NF stage 37 and 38	cephalic nerve, facial nerve, glossopharyngeal nerve, optic nerve, trigeminal nerve, [+] vagus nerve	immunohistochemistry
Green YS and Vetter ML (2011) Assay Paper	laevis	2 images	NF stage 28	brain, eye, facial nerve, forebrain, glossopharyngeal nerve, [+] hindbrain, midbrain, olfactory bulb, retina, trigeminal nerve	in situ hybridization
Retinoid receptors promote primary neurogenesis in Xenopus. Paper	laevis	2 images	NF stage 23 to NF stage 26	brain	in situ hybridization
The expression of XIF3 in undifferentiated anterior neuroectoderm, but not in primary neurons, is induced by the neuralizing... Paper	laevis	1 image	NF stage 28 to NF stage 37 and 38	brain, cranial ganglion, cranial nerve, forebrain, midbrain-hindbrain boundary, [+] rhombomere, rhombomere R2, rhombomere R4, rhombomere R6	in situ hybridization
Xenopus laevis peripherin (XIF3) is expressed in radial glia and proliferating neural epithelial cells as well as in neurons. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 35 and 36	brain, cranial nerve, eye, facial nerve, forebrain, [+] glossopharyngeal nerve, hindbrain, midbrain, midbrain-hindbrain boundary, retina, trigeminal nerve, vagus nerve	in situ hybridization
Microtubule-associated protein tau promotes neuronal class II β-tubulin microtubule formation and axon elongation in embryon...	laevis	1 image	NF stage 37 and 38	cranial nerve, facial nerve, glossopharyngeal nerve, optic nerve, trigeminal nerve, [+] vagus nerve	immunohistochemistry
Martinez-De Luna RI et al. (2017) Assay Paper	laevis	1 image	NF stage 50 to NF stage 52	retinal ganglion cell layer	immunohistochemistry
Martinez-De Luna RI et al. (2017) Assay Paper	laevis	1 image	NF stage 50 to NF stage 52	brain, ciliary marginal zone, eye, peripheral retina, retina, [+] retinal ganglion cell, retinal inner plexiform layer, retinal outer plexiform layer, ventricular zone	in situ hybridization
Xenopus laevis peripherin (XIF3) is expressed in radial glia and proliferating neural epithelial cells as well as in neurons. Paper	laevis	1 image	NF stage 22	forebrain, hindbrain, midbrain-hindbrain boundary, telencephalon	in situ hybridization
Xenopus laevis peripherin (XIF3) is expressed in radial glia and proliferating neural epithelial cells as well as in neurons. Paper	laevis	1 image	NF stage 51	ciliary marginal zone, eye, retina, retinal ganglion cell, retinal ganglion cell layer, [+] retinal inner nuclear layer, retinal neural layer, retinal pigmented epithelium	in situ hybridization
Xenopus laevis peripherin (XIF3) is expressed in radial glia and proliferating neural epithelial cells as well as in neurons. Paper	laevis	1 image	juvenile frog stage to adult frog stage	hindbrain, nucleus reticularis medialis, nucleus reticularis superior, ventricular zone	in situ hybridization
Xenopus laevis peripherin (XIF3) is expressed in radial glia and proliferating neural epithelial cells as well as in neurons. Paper	laevis	1 image	juvenile frog stage	cranial nerve	in situ hybridization
Xenopus tropicalis xthr plasmid library Unigene tropicalis cDNA library	tropicalis		NF stage 25 to NF stage 35 and 36	head	cDNA Library
XGC-tailbud-head Unigene tropicalis cDNA library	tropicalis		NF stage 28 to NF stage 29 and 30	head	cDNA Library
NIH_XGC_tropBrn4 Unigene tropicalis cDNA library Xenopus IMAGE cDNA Library	tropicalis		unspecified stage	brain	cDNA Library

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