XB-CLONE-2585094
Clone Name: IMAGE:8925508
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Gene:
vps50
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC157528
[+]
GACATTCAGTATGGCTGCCTGCTGGCTGTAGCTGAATAGAACGTACAATTGGCTGGGCTTTGACGTTTTTAAATTGCTGGAAGGAAGAACAGTCCGGGGT
CCGACATGCAGAAGATCAAGTCCCTAATGACCCGCCAGGGTTCTAAAAGTCCACAGGACAGTTTCCATGATCTTAGCCCAATTGAGAACTTGCGGACTCC
TACAAAGGAGGAGCTACGAGAACTTCGTGAAAGGGCCACAGATCCACAAGCACAACAGGAGTTAATTAACAGCATTGAAGATATATATTTCTCCAGCGAC
TCTTTTGATATTGTAAAATATGAGCTTGAGAAACTCCCCCCGGTTCTGAATCTGCAAGAAGTGGAAGAATACAGAGATAAACTTAAGCACCAGCAGGCGG
CAGTATCAAAGAAAGTTGCGGATCTGATTCTTGAAAAACAACCTGCATATGTCAAGGAGCTGGAACGTGTGACTTCACTACAGACAGGCCTGCAGCTAGC
TGCTGTGATTTGCACTAATGGAAGAAGGCACCTTAATGTGGCAAAGGAAGGATTCACTCAAGCTAGCCTGGGACTTCTTGCAAACCAAAGGAAAAGGCAG
CAGCTGATTGGCCTACTGAAGTCTCTACGAACTATTAAAACGCTGCAAAGAACAGATGTTCGGCTAAGTGAAATGCTAGAGGAGGAAGACTATCCTGGAG
CTATTCAGCTCTGTTTGGAGTGCCAGAAGGCAGCTAGCACCTTTAGACACTACAGCTGTATAAGTGAATTAAACTCAAAACTGCAAGATACTCTAGAACA
AATTGAGGAACAACTTGATGTTGCTCTCTCTAAGATTTGCAAGAACTTTGATGTTGCTCACTACACCAAAGTGCACCAAGCCTACAGACTACTGGGCAAA
ACACAGACTGCAATGGATCAACTGCACATGCACTTCACCCAAGCCATCCATAATACAGTGTTCCAGGTAGTTCTTGGATATGTGGAATTGTGTGCTGGAA
ACACAGATACAAAGTTCCAGAAACTTCCATACAAAGACCTCTGCATGCATATAACCTCAGACAGCTACATTCCCTGCCTCACTGACCTCTGCAAAGCACT
CTGGGAAGTTATGCTAAGTTACTTTCGAACTATGGAGTGGCATGAAAAATATGAGCGTGAAATTGCACCTCCCACACCTGATATGAACAATGTCAGTGGA
ACAGAAGATACCAACTTTGATCGAAGTTATATCAAAAAGAAATTGGAGCATGGACTGTCACGCATATGGCAGGATGTTCAACTAAAAGTCAAAACCTATC
TTCTTGGAACAGACATGTCCAACTTCAAATACGATGATTTTATCTTTGTTTTAGATATAGTCAGCAGGTTAATGCAAGTTGGTGAAGAGTTTTGTGGGAG
TAAATCTGAGGCGTTGCAGGAGTCCATTAGAAAACAGAGCGTCAACTATTTTAAAAATTATCACAGAACACGCCTCGAAGAACTAAGGATGTTTCTTGAA
AATGAGACCTGGGAACTTTGCCCAGTCAAGTCAAGTTTTAGCATTTTGCAGCTACATGAATTCAAATGCTTGGGGCAGTCTCGCTCTCCATCTATGTCAC
CAAGTAAGCAAACCTCTTCCGCTGAGTCGGCAGCAGTGTCGTTGTTTGAACAGTACACCAATGGAGGAAACCCTTTTGAGATACAGGCTGCTGTAAAAGA
TGATGACACTGAGGATGTGCTTGCTGCAAATGGGTATGAATCAGATGAGCTAGAAAAGAGTGCTTATCAGGAATATGATAGTGATAGTGATGTCCCTGAA
GAACTGAAGAGAGATTATATTGATGAGCAAACAGGGGATGTGCCCACAAAAAGTGTTTCAAGGGAAACTCTGAGGAGCAGAAAGAGATCCGATTATAGTT
TGAACAAGGCCAATGCACCTATTTTAACCAACACTACACTGAATGTAATAAGACTTGTGGGGAAATACATGCAGATGATGACAATATTAAAACCAATTGC
ATTTGATGTCATCCACTGCATGTCGCAGCTGTTTGATTACTACTTGTATGCGGTGTACACTTTCTTTGGAAGGAATGATGCATACGAATCCACAGGCCTT
GGCCTCAGTAGCAGCAGACTCAGAACAACACTCAACAGAATTCAAGAAAGTCTGATTGACATGGAAGTATCTGGTGAAAATGCTGTCTCATTGGTTTCTT
CTGAAGAAAGAAAGGAGAAAGTGCCAAGTCCACACCTTAGCCACATGGTCATTTTAACAAATAGTAGTACGTTGTATGGTCTCTCTGAACGAGTTGTGGC
TACAGAATCCTTAGTTTTCTTGGCTGAACAATTTGAATTTCTCCAGACGCATCTTGATTCTGTGATGCCAGCAGCTAAAAAGCCTTTCCTTCAGCAGTTC
TACTCCCAGACGGTATCTACAGCCAGCGAACTCCGTAAGCCAATTTACTGGATCGTTGCTGCCAAAGCCATCGACTATGAACAGTTGCTGCTTCTTATGG
CCAATGTGAAATGGGATGTAAAGGAAATCATGTCACAACATAACCTATATGTAGATGCTCTTTTGAAGGAATTCGAACAGTTTAATAAGAAGCTATCTGA
GCTTTCCAAACATGTCCGGATCCCTTTGCCAGTTTCCAATATTCTCTGGGAACATTGCATTCGTCTTGCGAATAGAACACTGGTGGAAGGCTATGCCAAT
GTGAAGAAGTGCAGCAACGAAGGCCGCGCTCTAATGCAGCTGGATTATCAGCAGTTTCTGATGAAACTTGAAAAACTCACAGACATCAGGCCGATTCCTG
ATAAGGAGTTTGTGGAGACCTATATTAAGGCCTATTATTTGACGGAAAATGACATGGAACGTTGGATCAAAGAGCACAGGGAATACTCAACCAAGCAGCT
GACAAACCTGGTGAACGTTTGCCTTGGATCCCATATCAATAAAAAGGCCAGGCAGAAGCTCCTAGCCGCTATCGATGACACTGACAGGCCAAAAAGATAA
CTGTCCTGGAATCCTCTCACCCAAAAATCATGCTACCAGATGGGATGCATGCTCAGCTGTTACACTGAATGCATTCTATAATGAATGGATAAGGGTGTCT
TTTTCATTTTAATTCACTTATATTATACAATTATGTGTGTTGATTTGTTTCCTGCTAGTCTTCATGAGATCCATTCGGTCCAGTTTTAATGGTTAAACCT
ATAAAGCATCTGGAGATGTTTCAAACAAAGCACTTTCTCTTCAATGGTGGGGTTCAAAACAATGTAATGCCAGCCAAACCAAAACCAACAACTTAGATAT
TTTCCTGTTGATAAATGATCAATAACCTACTGTAAATGTAATTTATAACCCATGGGTTTGGCCCTGGTACCACTCTGCACAATTTAGAATAAAATGACAT
AGTCCTGAACTTGCTGCATGGATTTCTACTTGATGGTAAAATTATCCTTCACAGTCTTTTAATATATTATTTGGTTTCAGAATTGGGTGTATAAACAGAG
ATTTTCCTTAATTACTGTCACTGTCCAAACTCTTTTTCCATTATTCCAGTATACCATACTCAGTGAGCTAAAGGAGCAAATTCTGCTCTGTGTCTGACTC
CCATTTGCACTATAAAGTAATGTAATGAGCGCTTATTCTTATTAGTGCACATACTGTCTAAAAACAAGGACTTGTGCAGGTCACGCTGAGCAGCTGTACT
GTAAAATAGCCATTAATAATGATTTTAATTGAACACGAATACTGCGTTAAAAATGGAAGCTCCTATTTAGTTTAACTGCAAATTTCAGGGATCACCATGG
TTTCCTGGAAAGAAATCACTTACTATGCCATCCTTTTAGAATTCTTAAATTGGTATGTATTTAAGTGTTCTCTGCTGTCAAGTGAATATTGCTGTATACA
ATGCAATGAATTGATTGTGTGCACCAGTATTGTATGGTTTATTGAATGAAAGGATTCTGTACAGTTCCACCTATTATAAATCCTTATAGGAAAGACACAG
CATTGGTCCTGTGATGCTGTTTCTTTTCTTTGATTATTACACTTACACAGGATTGTATTCCTTTTCATTAGCTTCTCCCCAGCTGTGTATGCGCTATACT
GTTATAACTAGACTTGACTTACAGGACATTGGAACCGTCCTTGACTACATGACCATATTTAATAAAAACCTGGCTATGTACTAAAAAAAAAAAAAAA
5' EST: EL671871
[+]gacattcagtatggctgcctgctggctgtagctgaatagaacgtacaattggctgggctttgacgtttttaaattgctggaaggaagaacagtccggggt
ccgacatgcagaagatcaagtccctaatgacccgccagggttctaaaagtccacaggacagtttccatgatcttagcccaattgagaacttgcggactcc
tacaaaggaggagctacgagaacttcgtgaaagggccacagatccacaagcacaacaggagttaattaacagcattgaagatatatatttctccagcgac
tcttttgatattgtaaaatatgagcttgagaaactccccccggttctgaatctgcaagaagtggaagaatacagagataaacttaagcaccagcaggcgg
cagtatcaaagaaagttgcggatctgattcttgaaaaacaacctgcatatgtcaaggagctggaacgtgtgacttcactacagacaggcctgcagctagc
tgctgtgatttgcactaatggaagaaggcaccttaatgtggcaaaggaaggattcactcaagctagcctgggacttcttgcaaaccaaaggaaaaggcag
cagctgattggcctactgaagtctctacgaactattaaaacgctgcaaagaacagatgttcggctaagtgaaatgctagaggaggaagactatcctggag
ctattcagctctgtttggagtgccagaaggcagctagcacctttagacactacagctgtataagt
3' EST: EL671870
[+]agtacatagccaggtttttattaaatatggtcatgtagtcaaggacggttccaatgtcctgtaagtcaagtctagttataacagtatagcgcatacacag
ctggggagaagctaatgaaaaggaatacaatcctgtgtaagtgtaataatcaaagaaaagaaacagcatcacaggaccaatgctgtgtctttcctataag
gatttataataggtggaactgtacagaatcctttcattcaataaaccatacaatactggtgcacacaatcaattcattgcattgtatacagcaatattca
cttgacagcagagaacacttaaatacataccaatttaagaattctaaaaggatggcatagtaagtgatttctttccaggaaaccatggtgatccctgaaa
tttgcagttaaactaaataggagcttccatttttaacgcagtattcgtgttcaattaaaatcattattaatggctattttacagtacagctgctcagcgt
gacctgcacaagtccttgtttttagacagtatgtgcactaataagaataagcgctcattacattactttatagtgcaaatgggagtcagacacagagcag
aatttgctcctttagctcactgagtatggtatactggaataatggaaaaagagtttggacagtgacagtaattaaggaaaatctctgtttatacacccaa
ttctgaaaccaaataatatattaaaagactgtgaaggataatt
Library:
Description: The library was made from dT primed cDNA and cloned into vector pCS107. PolyA RNA were primed with an oligo dT primer (5'-GACTAGTTCTAGATCGCGAGCGGCCGCCCTTTTTTTTTTTTTTT -3'), ligated to a SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3') and digested with NotI. cDNA was size selected using 1.1% agarose gel electrophoresis (>0.6kb) then ligated into NotI and SalI digested pCS107 vector. Primary library, non-amplified. Library constructed at the DOE Joint Genome Institute (Walnut Creek, CA) as part of the Xenopus Gene Collection project.Anatomy: thymus | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCS107
Type: plasmid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
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