XB-CLONE-3247170
Clone Name: IMAGE:7695912
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Gene:
hbs1l
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC167628 [+]
atagccgtggggcccgcaaggttccggaagcagatgaggggtgcgtgaggccacgggaattgtttgaggattgtactacatagcaacgtgagccatggcc
aggcatcgcaatgtgcgtggatacaactacgatgatgactttgatgacgatgacctgtatgggcagtctgttgaggatgactattgcatttccccagcaa
cagctgctcagtttatatacaaacgggacaggcaaacaagttttacagaaccattagaagaagaggaggatgaatatgaagaacctgataagttaaaacc
aaatgactcctctctaagtgctgttgatcaagccagactctattcctgccttgaacatatgagagaagtattaggggaatcagtgatggagcaagttatg
attgatgctgttttgaagagtcaatttgatgtagccaaggctctggacatagtattcaaacaagactgcaacaaaaatattaaaccagccaatcaagata
ttattacagagagaccaacaaaaggaaaaacaagagggttgcaggcctctgaacatgaatatgaaattgttccaaaaatggccaaaatgattgtctctgg
aaagaaacaaacaatgggatttgatgttccgagtgtctcatcggaaataaatggtcagagtgtaaaaggccaaactaacgaagaagcaatggaggaggca
gataatggcctgcagtctgccaatccaattccttcctcccaaaacacagaagaacacagctctatcatgacccctggcaaaagctccaacaaagcaaagc
agaaaattaatataaaggaggaactggagaaaaggcaaggaggaaaacacctgctaaaccttgtggtgatcggccatgtcgatgctgggaaaagcacact
tatgggccatctgttgtacctcctggggcatgtgaacaaaagaactatgcacaaatatgagcaagaatccaaaaaggctggaaaagcttcatttgcttat
gcatgggtgctggatgagacaggagaagagaggcaaaggggtgacgatggatgttggcatgaccaagtttgaaaccaagtctaaggttattacattgatg
gatgctcccggacataaagacttcatcccaaacatgatcacaggagctgcacaaccattgtttcattgcttccagtgtaaaccaggttccgcagcatcag
aagcaacataggtttgggaacaaggggcatcaattcatatttgcaaggcagatgtggctgtattagctgttgatgctagccgaggagagtttgaagcagg
ctttgaagctggagggcaaacacgtgagcatgccttattagttaggtctcttggagtaacccagttagctgttgctgtcaataaaatggatcaggtatgt
attttgctacagttatttattcatagatgcatttcatagatgtgcatttctataacatttgtaaatacctagtgacagtacttaattatgggcatccttt
aaaccaattaaacttcgattggcctttcaaatgcttcattcaggtctgtcctttttctatccacacagaaaaacttttaagttttaagagtgccattatt
cctgtttagaccacacattagcctatattaaagactatttcatcatgtatgattatgtatttttttcggttttcatttcacttgtgtaatagaaaggacc
agtttagtgcagttttttctatgtattttgttttttacaggttaactggcaacaagagcgatttaatgaagtcacctctaaacttggccacttcttaaaa
caagctggttttaaggaaagtgatgtatactacattcctacaagtgggcttagtggagaaaacttggttaaaaggagtcaaataagtgaactgattaatt
ggtacaaggggccttgcctactagagcagatcgattactttaaagcacctcaacgctctgtagacaaacccttcagattatgcacgtctgatgttttcaa
agatcaaggctccggattttgtgtgactggaaagattgaagctggctttgtccaaactggtgaccggttacttgctatgcctccccatgaaacttgcact
gtaaaaggaatcacattacatgaagaggctgttgactgggcagcggcaggggatcacgtcagtctcactttaaccggcatggatatcatcaaaatcaacg
tcggctgtgtattttgcagtccaaatgaacctataaaagcttgcacccgcttccgagcccgggttctcatcttcaactttgaggttcctataacacaagg
ttttcctgtccttatacattatcaaactgtgagtgagcctgccaccatcaggaaactggtcagtgtgctacacaaaagtacaggagaagtgatgaagaaa
aaaccaaaatgtttgacaaagggcatgaatgcagtgatagaattgcagacacaaagacctatagctttggaattgtacaaagactttaaagagcttggaa
ggttcatgttacgatacagcggctcatctatagctgctggagttgtaacagagataaaggaatgacactacaatctcatgggaaagtttccactgcacaa
acagcatagctacctgacttcccaagttaaaaaggcctggctaaaggtgaagtgcaattatgaagagagcctaaaccaaccgccacttgaaaacaatgtt
gcagcatctgcaccctacggaacaaagaacagccccatatattctcatcagtgaagtgcttctatgctcctgttaaccgtcctaaagcatacataaatgc
agcagttactagcaagatgctcttaacatctccttatattgaggggcaaagcatgaaaataaatttggctgcttacaaacatgtttacagatttctgact
ttctaaataaaacatctgcattttttcattttaaattaagatattcatttaatataattactgggcgcatcattattttgggaaatgaagcaaaaataac
ttttttaggatcttttttttttttcagtgcaacagcaaggacaaaacattaccaaagcttaaagcgtccaataaaatgttgtttttggtgtttattttga
attgcagtggaggatgtgccaataaataacaatttttaataaatcaaaacttatctcatagtagtgtaataaaaaaatctggtttgcgcataaaaaaaaa
aaaaaaa
5' EST: CX925283 [+]atagccgtggggcccgcaaggttccggaagcagatgaggggtgcgtgaggccacgggaattgtttgaggattgtactacatagcaacgtgagccatggcc
aggcatcgcaatgtgcgtggatacaactacgatgatgactttgatgacgatgacctgtatgggcagtctgttgaggatgactattgcatttccccagcaa
cagctgctcagtttatatacaaacgggacaggcaaacaagttttacagaaccattagaagaagaggaggatgaatatgaagaacctgataagttaaaacc
aaatgactcctctctaagtgctgttgatcaagccagactctattcctgccttgaacatatgagagaagtattaggggaatcagtgatggagcaagttatg
attgatgctgttttgaagagtcaatttgatgtagccaaggctctggacatagtattcaaacaagactgcaacaaaaatattaaaccagccaatcaagata
ttattacagagagaccaacaaaaggaaaaacaagagggttgcaggcctctgaacatgaatatgaaattgttccaaaaatggccaaaatgattgtctctgg
aaagaaacaaacaatgggatttgatgttccgagtgtctcatcggaaataaatggtcagagtgtaaaaggccaaactaacgaagaagcaatggaggaggca
gataatggcctgcagtctgccaatccaattcttcctcccaaacacagaagaacacagctctatcatgacccctggcaaaagctccaacaaagcaaagca
3' EST: CX925282 [+]gcgcaaaccagatttttttattacactactatgagataagttttgatttattaaaaattgttatttattggcacatcctccactgcaattcaaaataaac
accaaaaacaacattttattggacgctttaagctttggtaatgttttgtccttgctgttgcactgaaaaaaaaaaaagatcctaaaaaagttatttttgc
ttcatttcccaaaataatgatgcgcccagtaattatattaaatgaatatcttaatttaaaatgaaaaaatgcagatgttttatttagaaagtcagaaatc
tgtaaacatgtttgtaagcagccaaatttattttcatgctttgcccctcaatataaggagatgttaagagcatcttgctagtaactgctgcatttatgta
tgctttaggacggttaacaggagcatagaagcacttcactgatgagaatatatggggctgttctttgttccgtagggtgcagatgctgcaacattgtttt
caagtggcggttggtttaggctctcttcataattgcacttcacctttagccaggcctttttaacttgggaagtcaggtagctatgctgtttgtgcagtgg
aaactttcccatgagattgtagtgtcattcctttatctctgttacaactccagcagctatagatgagccgctgtatcgtaacatgaaccttccaagctct
ttaaagtctttgtacaattccaaagctataggtctttgtgtctgcaaatctatcactgcattcatgccctttgtcaaacattttggttttttcttcatca
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropTe3 and Te5 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: testis | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Suppliers: