XB-CLONE-3258944
Clone Name: IMAGE:7685224
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Gene:
hydin
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC168019
[+]
gtttcatactggaagagtagtataacaatattcaatacataacatgtttaccaaaggaagcagccatgccaaccagcaaacttccaggggcagcaaagtc
agtccaggagatgccttttaaaatgtccagcaggttccaaagcaaagtggtggcaccacgtaaccccaagcttgtcaaagatgaacaaccttcactaacg
ctgactccctcagcattcctcaaggaaatgtcactaactacagaggaaaggctggccagcactcgggagatgcatcctccacggatcattcaactgcttg
atatgagtgaaaccacccaccaaaagttctccacagtggacttggaccaagctcttttccaaccttttccttcagagattgtcttccaaaactatgcagc
ctgtgagacatatgaggtgccactgattttaaggaacaacgataaggtgccgcggctggtgaaagtcattcaggagaattcaccctactttcaaatcatc
agccccagtgatgtgtgtaacaaagtggctccagggatgccatctatatttcgtattcttttcactcctgaggagaataaggactatttccatgaactcg
tatgtgtcacagaacgagagaaatttgttgttcctgttcgagctattggagcacgtgcattgttggactttccagaccaactaaattttttgctttgtcc
agtcaagtacaactcccaaaaaacactcttggtgcggaacattgggaatcgtgaggcgagatttcaactccttactcgaagtccttttattgtcagtcct
gtgtctgggactttggcagttggtgaaagtatgcaagttatagtggagtttttgcccctggaagtgggtgaccacacacaggttatgataatccattttg
acacaggagaagatgttcatgttggattgtatggagctgccactgatatcaatgtccggctggacaagaattctctgataatagagaaaacatacttgtc
actaactagtcaaaggacagtaaccattagcaaccgcagtgacattatagctcacttccagtggaaagcattctcaagtcagcaggaggaggaacatcaa
aagctaaggaaggtgatgtctggcctaattcatctgtagaaataagtgtgtttttcaagcctcaagcgcctaagatctaccaacggactatctactgtga
cataacaggcagagaaaccagacttcccttgcgaataagaggtgaaggccttgggccaaagcttcatttcaactttgaccagttggatattggcaagatc
tttgttggttccacacacagctatgaggctgtcctgacaaaccgaggagctgttgatggaatatttactctaatccctacctgctctgctgttggttcct
gcttcaccttcagtcccaatgaaggaatcatcttgcctgcaggacaccaagccatccaaataacagtgtgctccagcattctgggagagttcaaagagga
gttccacttcagtgtagatggagcatctgaggaagtaaaattaactatcagtggctgtatcattggacccacatttcactttagcttaccatcacttcag
tttggggatatttcatttgggtttccgtccactttaactttctctcttaataatacatcgctggtaccaatgacctttaagctgcgcatccctggagatg
gcactggggagccgagcatcacaagttccaatcagattttaaatgataggaggtcatcatggagaagaggagttaaaaatgccagccctaaggagttctc
tgtcgctccctccagaggcactatccgttctcagggacagctagatatacaggtcactatttgttccaatcaggttaaaagatacgaactggctcttgtg
gtggatgtggatggtattggagatgacgttttggctttgcctattactgccagatgtgttgttcctactgtgtgtctgatggactctatgctaaaattca
gccgttgcttcctacattacccatatgagaagacagtgacccttaaaaatctgagtaaccttcctgcttgctatggattagagccacaggagccaaatgc
tacttctacagtgctgtattatagtcccaatcccagtggtattatagagccacagggaagtgtagatgtgcccatcattttgaaggctcaggtgactggg
gagcagggcatcaaggccaagattgcactgtttggatgcaatgagtctccactggaggtgctgttgttgtgcacaggagaagggcccgttgtccatgtat
atcccactgagatggactttggaaatattaaggttctaactgatatatcaaggattctgcatttgagcaatcaatcattgatcccagctcggttcatggc
acataagacacgcaagcgttctctgtggcgcattgagccaagccatggtgaggtccctcctcatggagaaatacaacttaccgtttttgctcatttggat
gatacaatcagtttccaagacaaaatccagctgatgattgaaaacagtaacacctatttcattcccctgtatgccaagggcattgggaccaccattgtca
ctgacaaaatgtttgctcctgtcttaaacctgggagcccatttcagtgctggcccctgtcagtaccattttactatgaccaatcgagggcgtcgtaccca
acagctatactggatgacagaggggttctcccagcaacgaaaacgttcacagcccccgagcattaaaacaggagctatcaactctgagcatacaagccca
gttttcaaactgcatccatcacgcatggagcttactccaggtcaaagtgtagatgtgctccttgagggattctcagatcttcctcaggtggtcaaggaga
cgcttgtgggtcaggccattattggaaaacagacagggaaggaaacaatcatggaggtggatgtaatatgtgaatttattgctcctgttttaaacctctc
ttctaagaaccttcacttttacaccgagaagcaaccagatgactgtcttgttcctatgtctaaatcattgaaaatgaaaaacatttcttctcttccgctg
acaatatttctgactttgagtgagccattctctttatgcaataatgatcctcttggaaatggagaagcaaagcctcaaattctggaagctggagaagaaa
acgtaattactagatgcagatcttaaggagccagaaactggtcagacaagctgtatagaagacaatgggataatacctagcactgagctaaacttccaag
atcttaatgaaaactctgatggaaaggatttgatgtcagaaagtgatctagatgggttaagccaggatcatcatttaagtgatttgcccattgtagataa
aatttctgtgtcagagaaggatcatgtaataaccggagtggaagaggttttcgatataatgcctctttttgggacattacagccaggagaaagtcaaata
atatgcttcactttttatggacatgctggcatcagtgcacaagcaaaagcactttgtaaagtgagtggtgggccaacctatgaaataagtcttcaaggag
aggcctcacttgtcagttatactctgaatacaaaagacattaattatggaatacagcggtttgatcaggtggctgaggcaagtattatactcaagaacac
tgggaaggtcagctttccatttactgtgcttaaccaaaactgtgaggggaccatgatacctggggagcccctggtacagccagtcagcggtcacattgct
gctggtgaggagggggtccttaaggtatcctttttccctgggattccagaatctttccagagggttattcagctacaagtggctcattttgaaccagaaa
gcattactcttcaaggggaggcagtgttccccagaatctgtttggatcttcctcgtaacattaaagaaaatgagaagttgcaggcctatttgagagaggc
agaggggaacatgatggaaacaaagcacattatgaacagtttagtgccatctacaaacatggaaacttcttttgagccacctaatactgctatggacagt
ttgttaatgatggagatggaacgcttatttttaaaggaacatgcaacagagcagctgctgtctagagagggtgtccacacagttcagcaaaaacttctca
agattcagtacagagttagatcgagtgaaaaacttaccttgctgtcagactgagactttccaagttaagtttgatcctagaggtgccaaccttaaccttg
gacttgtggaagctgtaatgattatccaggtatctggaggatccaaatttccagtgcgactaagggcaacagtgacaatgccttctttgtgtacttcaag
tgacagggtggaatttagtcctgtgcagtgtgggcaatgtgaaatcaggtctatacagctttacaaccctctgcctgtgctgtgtgaatgggctgtaatg
agccaggataatgaaatcaagatagacaaacacacacctcttcacctacgtaagaaattgcgtcaggacatgaaacccaagccacctatctttgagctga
tgcctgcagctggaattctacttccttctctgaagaaaaatgtagaaattcggttcttccctcaggaagagaaactgtatagccaacgcttggtgctgca
ggttgctcagagtagtcagcgcgtgatgatcctagtggaggggaagggaatggaacctcgtttggaatttaccccctctgtgctggaactaggtcctgtt
cttccatttagctctggggatgatgttgaagttcttgtgaagaatccctgcagctttcccatagagttctattgcttggagatggacaagcagtacttgg
aagaagagaagattcttcggatgcttaaaggctatgactcacagaacactttgctgcttccacctcggattcctggggagaaattgccatatgagattct
cgagtattatgaggagcaaaaacgattacaagaggaaattgtacatcccctcttgaccgatcatcaggagagtggggctgaggagcctgaggaagaacag
acctttgatccctctgagaaacaggatttgcttggaacccagcatattccctccaatacaagctgtattgagagtcgttcctctcggactgaaggaaacc
cagaagaagcagaagagccagagaaaagagcaagttcaggtgacaggagtagagaaaaacagctacaaactgataatgacaccaaggcagtgggggagtt
ggaccaaaaccctgtttccttagctattgctaggcatatgggaatagacatcagcagtgagggccgagcagcaagtaatcgcagaggcattgccatcata
gttcacggagcacctctcactggaaagtcttcagctgcagtgactttggcacagcattataatatcccatgtctaagcattgattcggtggttctggatg
ctatttctgatagtaatagccctactggtatgagagcaagacaactctgttccaaggctgcctttgatgtggccttgcgtgaatctgaggagacggcttt
acaggccacagagaccagtggtcagcccggacttagtatggaagctttggccaaacacactgctgaaggagggcaaggaactgatactaaaactggtcct
tattcagttatttcccgagccaatcgaggtagcatagtgactggaaagggcaagtcagaaagccatcaaatgcaaggaagcaagcaacaacatctttctg
aacctgcaggatcacagacagaaagttctccctttccagcttgtcccacccaaaaacgattaagtgtcagtgccagtgtgggtggtgagcttgggttgat
gagttgtgtcctaccagatgaattattacaagatataataagtgagagattgcagctgaatgactgctttcggggtgtcatctttgatggcctggataca
ttgtttgctcgcaatatgccctctgctgttctctctctgctgaaatcatttaataaccgccagcacatatacattattaacttgcaccaggattatgcca
ccatgaaagaacgtgagaaagcacagagacagaaagaagaggatgatcgcctgtgtgcagaggccaaagacagaactcgtatagaagaaatggatgaaga
ggaatatgacaacctacctgaagaagagcgtgcacacattgatggtttgcgcctcatagctctgcgggagcgaaagaaaagagagcaggaagagcgccag
gctcgggaagagcaacaaagaaaacttcaggaagagttattgaggcaacgagaagaggatgagttaaggaaaaagaccaaaagaggaaaaagccgagagg
acacaggcggaaagaaaagccagataggaagcaagcagattaataatttacatgctgtaaagtctgaagtgagaattgattcagggttagaaagaaaagt
atctgtaaaggatcgcccagagtctgtggctaatgatttggatgatgcattgaaaaggaggaaaagtaaagacattaagggaggtattggagacattgca
caacaagtttcagttcctgaagattttgagaaggaagtagtcagtgaaagtgagaagaagctacttcagaggttcaaaaactatgaatcttgtaaaaagg
aaatcatgcaaatctctactttctgggatcgtgtgcagggtatcatggtgattccttctttggcggaagtaagtcaacatgaaggggaagagcttatccc
agaacgccaactaccctctggaaagagaaatcgaaaggaccgtgagcgtgaccgcctggagaagctagagcgagaaaagacagagaaagaacgtttagag
aaagagagattggagaaagaaagactgaccaagttgagaagcagggaggatgatgctgaatcacactcacaaagagagggatgtgaggaacctaaagagg
agctgaagttagatttgggagtaccctaaaaaaaaaaaaaaa
5' EST: CX904459
[+]tttctactggaagagtagtataacaatattcaatacataacatgtttaccaaaggaagcagccatgccaaccagcaaacttccaggggcagcaaagtcag
tccaggagatgccttttaaaatgtccagcaggttccaaagcaaagtggtggcaccacgtaaccccaagcttgtcaaagatgaacaaccttcactaacgct
gactccctcagcattcctcaaggaaatgtcactaactacagaggaaaggctggccagcactcgggagatgcatcctccacggatcattcaactgcttgat
atgagtgaaaccacccaccaaaagttctccacagtggacttggaccaagctcttttccaaccttttccttcagagattgtcttccaaaactatgcagcct
gtgagacatatgaggtgccactgattttaaggaacaacgataaggtgccgcggctggtgaaagtcattcaggagaattcaccctactttcaaatcatcag
ccccagtgatgtgtgtaacaaagtggctccagggatgccatctatatttcgtattcttttcactcctgaggagaataaggactatttccatgaactcgta
tgtgtcacagaacgagagaaatttgttgttcctgttcgagctattggagcacgtgcattgttggactttccagaccaactaaattttttgctttgtccag
tcaagtacaactcccaaaaaacactcttggtgcggaaca
3' EST: CX904458
[+]tttttttttttttttagggtactcccaaatctaacttcagctcctctttaggttcctcacatccctctctttgtgagtgtgattcagcatcatcctccct
gcttctcaacttggtcagtctttctttctccaatctctctttctctaaacgttctttctctgtcttttctcgctctagcttctccaggcggtcacgctca
cggtcctttcgatttctctttccagagggtagttggcgttctgggataagctcttccccttcatgttgacttacttccgccaaagaaggaatcaccatga
taccctgcacacgatcccagaaagtagagatttgcatgatttcctttttacaagattcatagtttttgaacctctgaagtagcttcttctcactttcact
gactacttccttctcaaaatcttcaggaactgaaacttgttgtgcaatgtctccaatacctcccttaatgtctttacttttcctccttttcaatgcatca
tccaaatcattagccacagactctgggcgatcctttacagatacttttctttctaaccctgaatcaattctcacttcagactttacagcatgtaaattat
taatctgcttgcttcctatctggcttttctttccgcctgtgtcctctcggctttttcctcttttggnctttttccttaactcatcctcttctcgttgcct
caataactcttcctgaagttttctttgttgctct
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 0.5-1.5 kb size fraction (additional size fractions contained in the NIH_XGC_tropTe4 and Te5 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: testis | Stage: |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
Suppliers: