XB-CLONE-3297141
Clone Name: IMAGE:7663169
|
Gene:
pam
|
Species: Xenopus tropicalis
|
|
|
Sequence:
Full length sequence: BC166173
[+]
ggaagctttaaggatttcacacaccgttcttgtgactggaatagaattagcctattttatatctagttttctctcacagctgagttgcttgtggattttc
agctggggattctgggagttgtattccagcaagatctgaggagtctgttatcaggctctcaatgaagaccgatgctggcgtttgcgtgatgtcactcaaa
ggactgttcagttgtgggtgatcggtagagcagcagtgtgccagcttctaagggaaccaaagcatcggaacttgtaccctgaacaggcacattatactgg
acacaagtgcacttcttccctaaaggagatcctatcccaggaaggatgtgcatttctggctacctctggggctagcactcatggagtagggggattgatc
cagcttcctaattaccaggattacaacactgcctttaatttaccactgtagtaaggcacagaccacagggtgaatatggccagcttcatcagcagcttgc
ttgtgctctttctcatatctcagaacagctgttactctttcaggagtcccctctctgtctttaaaaggtatcaggaatcaaccagatcactttccaatga
ctgcttgggaaccacacggcctgtaatgtctccaggctcgtcagattatactctagatatccgaatgccaggagtaactccgactgagtcggacacatat
ctgtgcaagtcttaccggctgccagtggatgatgaagcctatgtagttgacttcagaccacatgccagtatggatactgctcatcacatgcttctgtttg
gatgcaatatgccctcttccactgatgattactgggactgtagtgcaggaacttgcacagacaaatccagtataatgtatgcctgggcaaagaatgcacc
acccaccaaacttccagaaggagttggatttcgagttggagggaaatcaggcaatagatattttgtgcttcaagttcactatggtgatgtgaaagcattc
caggataaacataaagattgcacaggggtgacagtacgaataacacctgaaaaacaaccgctaattgcaggcatttatctttcaatgtctgttgacactg
ttattccacctggggtagatgcagttaattctgacattgcctgcctctacaacagaccagcaatacatccatttgcctacagagtccatactcatcagtt
agggcaggtcgtaagcggatttagagtcagacatggcaagtggactttaattggtagacaaagcccgcagctgccacaggcattttatcctgtggagcat
cccttagagattagccctggagacatcatagcaaccaggtgtctgttcactggtaaaggcaagacgacgccaacatatattgggggcacagctaaagatg
aaatgtgtaatttatacataatgtattacatggatgctgcccatgctagttcctacatgacttgtgtacagactggggaaccaaagctatttcaaaacat
cccagagattgcaaatgttccgattcctgttagccctgacatgatgatgatgatgggacatggtcaccaccatgaagaagctgagcctgagaagaataca
gcacttcagcagcctaaacgggaggaggaagaagtattagatcagggtgatttctattcccttgtttccaaactgctaggcgagagggaagatgttgtac
atgtccataaatacaaccccacagatatgctagattctgatctcgtagccgagatcgccaatgtcgtgcaaaagaaagaccctggctggtactatgacag
acaagtcctggggcacgataagcagcccaacacggttttggtcagagaccgaattcacaaattccataaattagaatccaccttgagaccgccagggaat
acgctcccccaggtgcagcaaggtagacctgctggagccgacaccagggagaagcagcatctaggagatgtccatttagaagaagatacagactggcctg
gagtgaacctaaaagtgggacaagtgtctggcttagccctggatcccaagaataacttggttattttccacagaggggatcatgtctgggatgaaaactc
atttgataggaactttgtttatcaacaaagaggaatcggaccaatccaagagagcaccatccttgttgttgatccaaatacctctaaagtacttaagtca
gcagggaaaaatctgttttttttgccccacggcctgactatcgacagagatggcaattactgggtcacagatgtagcccttcatcaggtttttaaattgg
gagctgaaaaagaaacaccactccttgtattagggaaggcttttcagcctgggagtgaccgaaagcatttctgtcagccaactgatgttgcagttgaccc
tattactggaaacttctttgtgtctgatggctactgcaacagtcgcatcatgcagttctcgccgaatggaatgttcatcatgcagtggggagatgaaaca
tcatcaaccattcccaaacctggtcagttccgcatcccacacagcctgaccatggtacctgaccatggacaactgtgtgtggccgacagagagaatggcc
gcattcagtgcttccatgctgaaacggggaagtttgtaaagcaaatcaaacatcgggaatttggaagagaggtgtttgctgtgtcgtatgcaccaggtgg
agtgttgtatgctgttaatggaaagccgtactatggagattctgcccctgtacaaggctttatgcttaatttctccaatggggagattttagatacattc
attcctgctagaaagaattttgaaatgccccatgatattgctgcagcagatgatggaacagtgtatgttggggatgcgcatgccaacgcagtctggaagt
tctccccttcaagggcagagcatcgatctgtcaaaaaagctggaatagaagttgaagaaataaaagaaatagagatctttgagacccatatgagaagcag
accaaagacaaatgaaacaactacagagaaacaagcacaggaaaaacaaacccaggagaagcagagcgttgtccaagagagcagtgcgggggtgtctttt
gttctcatcatcactcttctaatcattcctattgtggttctcattgctattgccatcttcattcgttggaggaaagtcagaatgtatggaggtgatattg
accacaaatcagaatccagttctgggggtatcttgggaaaacttagagggaaggggagcggaggccttaatctggggacattctttgcaactcacaaagg
atatagtagaaaaggcttcgacagactgagcacagaaggaagcgaccaagagaaagatgatgatgatggctcagactctgaagaagagtattctgcccca
cctattccaccagcaccagtatcttcctcctgaaacagatgacttcttccacagaaccttttgccccattagcacgtttaagattgtgtatttaaatgta
actgtactagtctgtggactgtacaattgtcatagtttttctttttctttttatttgaagtgatgttgtagtctctatatgaacatccaaaataattcta
tttggtaaatgactttggctttagagagcgtttttccagtgtttgatggccttcctctgcttcaccaatagcactttaactgccaattattttcaagcct
ttaactgaaaactaatcgcatttcaaagatatgtgccacataaatgcaaagctgctaaatctcttctatttttttaaattaacaacatgatattgcgtcc
aagaaagggaaactataaagacaaaatatttaatgtttcttatttctttctatttttttttctttgtttttggtgttattgggatgtcttatttttagat
ggttccactgtttagaacactattttcagaaactgaatgtactttgtgtaataaagtgttcgcagagcatcaaaaaaaaaaaaaaa
5' EST: CX845998
[+]gaagctttaaggatttcacacaccgttcttgtgactggaatagaattagcctattttatatctagttttctctcacagctgagttgcttgtggattttca
gctggggattctgggagttgtattccagcaagatctgaggagtctgttatcaggctctcaatgaagaccgatgctggcgtttgcgtgatgtcactcaaag
gactgttcagttgtgggtgatcggtagagcagcagtgtgccagcttctaagggaaccaaagcatcggaacttgtaccctgaacaggcacattatactgga
cacaagtgcacttcttccctaaaggagatcctatcccaggaaggatgtgcatttctggctacctctggggctagcactcatggagtagggggattgatcc
agcttcctaattaccaggattacaacactgcctttaatttaccactgtagtaaggcacagaccacagggtgaatatggccagcttcatcagcagcttgct
tgtgctctttctcatatctcagaacagctgttactctttcaggagtcccctctctgtctttaaaaggtatcaggaatcaaccagatcactttccaatgac
tgcttgggaaccacacggcctgtaatgtctccaggctcgtcagattatactctagatatccgaatgccaggagtaactccgactgagtcggacacatatc
tgtgcaagtcttaccggctgccagtggatgatgaagcctatgtagttgacttcagaccacatgccagtatggatactgctcatcacatgcttctgtttgg
atgcaatatgccctcttccactgatgaatactgggactgtagtgcaggaacttgcacagacaaatccagtataatgtatgcctgg
3' EST: CX845997
[+]tttttttttttttttgatgctctgcgaacactttattacacaaagtacattcagtttctgaaaatagtgttctaaacagtggaaccatctaaaaataaga
catcccaataacaccaaaaacaaagaaaaaaaaatagaaagaaataagaaacattaaatattttgtctttatagtttccctttcttggacgcaatatcat
gttgttaatttaaaaaaatagaagagatttagcagctttgcatttatgtggcacatatctttgaaatgcgattagttttcagttaaaggcttgaaaataa
ttggcagttaaagtgctattggtgaagcagaggaaggccatcaaacactggaaaaacgctctctaaagccaaagtcatttaccaaatagaattattttgg
atgttcatatagagactacaacatcacttcaaataaaaagaaaaagaaaaactatgacaattgtacagtccacagactagtacagttacatttaaataca
caatcttaaacgtgctaatggggcaaaaggttctgtggaagaagtcatctgtttcaggaggaagatactggtgctggtggaataggtggggcagaatact
cttcttcagagtctgagccatcatcatcatctttctcttggtcgcttccttctgtgctcagtctgtcgaagccttttctactatatcctttgtgagttgc
aaagaatgtccccagattaaggcctccgctccccttccctctaagttttcccaagatacccccagaactggattctgatttgtggtcaatatcacctcca
tacattctgactttcctccaacgaatgaagatggncatagcaatgagaaccacataggaatgatta
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
Suppliers: