XB-CLONE-3298495
Clone Name: IMAGE:7662167
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Gene:
vcan
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC121258
[+]
GGACTCAGCACAGACACACGCTGCAGAGACTTCTGGGATCAGGTGCCCTTGTTCTACGGGGACTTTTATAGTGCAAGAGCCTACAAACAGGATCCCCCCC
AAAAGCATCCCTCCAGCCCTCCAGCCTGGGAATATACTCCATCAGCCACAAGCAAGTCTGAGAGAGATTTCTGTACAAAAGTGGATTGGATGCAGCTGCA
CTGCTAGGTCACCTTAAAAGGTCAAGATGTTACTAGAAATAAAATATATATTTTGGATATTCTCGGCATTCTCCCTTACTAATGCATTCCGTGCAGTTCA
AGTGGAAAAGAGTTCCCCAGTGAAGGGTTCGTTATCTGGAAGAGTGAATCTGCCATGCTTTTTTTTCAACCATACCAACATTGCCACCCAGCTACAATAT
TACAAATGAATTCCTGAGGATCAAATGGACCAAAATTGTTCAGAGCAGAGATGGAAAGGACCCAAAGGAAACTACAGTTTTGGTGGCCCAAAGTGGAAGT
ATTAAAATTGGACAACAATATAGAGGCAGAGTGTCTGTGCCAAGTCACCCTGAAGACATTGGGGATGCATCTTTAACCATAGTCAAACTACGTGCTAGTG
ATGCTGGTGTTTACCGATGTGAAGTTCTGTTTGGGATTGAGGATACCCAAGACACAGTTTCCTTGGATGTTTCAGGAGTTGTGTTCCACTACCGAGCCTC
TACTGACAAGTACACTTTGGACTTTGAGGCTGCTCAGAAAGCATGCATAGACAATGGTGCCCAAATTGCAACTCCTGGACAACTGAGAGCAGCTTATGAA
GATGGTTTTGAGCAATGTGATGCTGGGTGGCTTTCTGACCAGACTGTTAGATATCCAATCCGCTCGCCTAGAGCAGCCTGCTATGGTGATAAAATGGGAA
AGGAAGGAATCCGTACCTATGGAAAGCGTCCTGTTTCTGAGAAATACGACGTGTACTGTTTTGTGGATGAACTGGAAGGTGACCTGTTTCACACGACTGC
TAACAAAAAGTTCACCTTTGAAGAAGCCAAACAGGAGTGCGAGAAGAAGAATGCCGCTCTGGCCACAGTGGGAGATCTGTATGCGGCCTGGAGAAAGGGA
TTTGACCAGTGTGATTATGGATGGCTTGCTGACGGCAGCGTTCGTTACCCAGTATCTGTGGCCCGACCCCAGTGTGGAAATGGTTTGCTTGGAGTTCGTA
CCAAATACCGCTTCAGTAACCAGACTAATTTCCCTAATTCACTGGAGAGATTTGATGCATATTGTATCCAAAGCAAAAGGAATATAACGGAATCTGTATC
TGTTAGATTGATATTTCCGACTGAAGCAACAACCGCCAGTATTATAAAAACAGTAGAAAAATTATCTGAAAAGGTAACAGCAAAGTCTGTTTATTCTCAT
GGACGACAACCTGCAACAGAAAGCATTTCACATTTGAAAGCAGAAACAACTGTTACAGCTGATGCCAGACAGAGAGAAACAGTAGGCCCAACAGATCCAT
CAGCTCTATTATTTCAAGAAGAGGGTACCTCGGCTTCTAAACTGGAAAGTAGCCAAGATGTAATAGAATCTTCCGCTGATCAGACCGAAAAAATAACAGA
GTCTCCTGTGAAACAACAATTTTCTGTAACTGATAATTCCATAAAACTGACAAAAGAGGTTTTATATCAAAGTTCACAGCCCCCAAAAGGGTCAATGGAA
GCCAAAACTGAAGAAGTTATCCCAACGGTTATAATACATCATAAGATTGTTGGTGATGACATTGTTACCAGCCCACCAGAAATAGAAGCAGGACCTGAAG
AACCCGTTGATAGTGTTGTGACAGTAAGTAGTTTAAAACATGATTTTGATTCCTCAAGCACACAGCCTGAGGTGGATGTAATTACAGTGTACAAAACATC
CACCTCTGTGCAGCCTGGAGTAACTTCAGGCTTTGATTCCTCTGAGGAAGGTAGCCAGCCAATTGTGGCTACAGACTTGATAATTTCAAAAGACAAACAT
GTAGTTAGTACAGTTACAGCCCATCAAGATGAGTTCACAGATGAAGGCAGTAGACTTGAACTAGAAAGTACAACATTGCCTGAGAGCACTGTCACTCAGG
ATGGAATTGTAGAATCTGAGGACAGTTATGCAGTTGCTGTGGAAGAAACAACATCACCACCAGTGCTTCTTGTTCAGTCAAGCCAACCATCACATTTAGA
CATGCATGTTCCTGAAGCCATCTCTACAATCAAAGAACAACAACCAACCGAAACACACACCACTTATAAAGAGACAGTCGAAGAACAGATAACACCAAAA
CCTGTTCCTATTTCTACCCAGAAGCCACATCTGATAGATGTGGAACCCGATGAGGAAACCAGCAAGGGAACAATAGTGATTGGTGAGTCTATTTCTCATC
TAAAAGTTACAACTGAATCTGATATGACAGGCAAACAGAAGCAAGATATTGACTCAGAATACCTGACAAGCGGAACTTCTGCAAAAGAACCCACCCAGGA
GCCAGAATGCGAGGACACCTCAGATGAGACTCAAACGAATGTACACAATGAAGATTCGAATCAGATACCAATCAATCTGATCGTTGTAGAAGTTAATGAA
AATGTGACAGGTCAAGACCCATGCAAAGTAAATCCATGCCAAGGTGGAGGGACCTGTTACGCTCGTGGAGGTTCATCCTTTGTCTGCACATGTATGCCTG
GTTTCAGTGGAGATCAGTGTGAAATTGATATAGATGAATGTCAGTCAAACCCTTGCCGGAATGGAGCAGCGTGTGTTGATGGGATAAACTCCTTTTCATG
TATCTGTCTTCCAAGCTACGCTGGATCACTTTGTGAGCAAGACACCGAGGTCTGTGACTATGGCTGGCACAAATTCCAAGGTCACTGCTACAAATATTTT
GCCCATCGACGTACCTGGGACGCAGCCGAGAGAGAATGCCGTGTACAAGGTGGCCACCTGACAAGTATTATGTCCAATGACGAACAGACTTTCGTCAACC
GTTTAGGGCATGATTACCAGTGGATTGGCCTCAATGATAAGATGTTTGAGAATGACTTCCGTTGGACTGATGGAAGCACAATGCAATATGAAAACTGGCG
GCCAAACCAACCAGACAGTTTCTTCTCAGCTGGTGAAGATTGTGTCGTTATTATTTGGCACGAGAATGGCCAGTGGAACGATGTTCCATGCAACTACCAT
CTTACTTACACCTGCAAAAAGGGAACAGTGGCGTGCGGACAGCCTCCTTTTGTTGAAAATGCCAAGACCTTTGGAAAGGCCAAACCTCGCTATGAGATAA
ACTCTATGGTCAGATACCACTGCATGGAAGGCTTTGTACAGCGCCATTTGCCAACCATAAGATGCAGAGGTGATGGACGATGGGATTTGCCTAAAGTGTC
CTGTCTGAAACCTTCCAATTTCCAAAGGACTTACTCTAAGAAATATTATTACAAGTTTACTCCACCTGAGATGAGGGCTTCCATGAATTCTCCAAAGCAC
CACCACAGCTGGAGCAGGACTTGGCAAAACTCCCCACGCTGAAGAACCCCGACCAACCATCAGCAGACACCTTGGCTGCCAAAGTCCTCATTTATAGTGC
CTTTCACAAGAGTTCCGAGAAGTGATATCTTAGACTTGGACTATGGCGTTGAATAAAAAAATAAGACATTTTGACCTAAAATCTTAGACATTATAGGGAC
TAAACCTGATGTAAGCAAAAAAAAAAAAAAA
5' EST: CX843900
[+]gactcagcacagacacacgctgcagagacttctgggatcaggtgcccttgttctacggggacttttatagtgcaagagcctacaaacaggatccccccca
aaagcatccctccagccctccagcctgggaatatactccatcagccacaagcaagtctgagagagatttctgtacaaaagtggattggatgcagctgcac
tgctaggtcaccttaaaaggtcaagatgttactagaaataaaatatatattttggatattctcggcattctcccttactaatgcattccgtgcagttcaa
gtggaaaagagttccccagtgaagggttcgttatctggaagagtgaatctgccatgcttttttttcaaccataccaacattgccacccagctacaatatt
acaaatgaattcctgaggatcaaatggaccaaaattgttcagagcagagatggaaaggacccaaaggaaactacagttttggtggcccaaagtggaagta
ttaaaattggacaacaatatagaggcagagtgtctgtgccaagtcaccctgaagacattggggatgcatctttaaccatagtcaaactacgtgctagtga
tgctggtgtttaccgatgtgaagttctgtttgggattgaggatacccaagacacagtttccttggatgtttcaggagttgtgttccactaccgagcctct
actgacaagtacactttggactttgaggctgctcagaaagcatgcatagacaatggtgccccaattgcaactcctggacaactgagagcagcttatgaag
atggttttgagcaatgtgatgctgggtggctttctgaccagactg
3' EST: CX843899
[+]acatcaggtttagtccctataatgtctaagattttaggtcaaaatgtcttatttttttattcaacgccatagtccaagtctaagatatcacttctcggaa
ctcttgtgaaaggcactataaatgaggactttggcagccaaggtgtctgctgatggttggtcggggttcttcagcgtggggagttttgccaagtcctgct
ccagctgtggtggtgctttggagaattcatggaagccctcatctcaggtggagtaaacttgtaataatatttcttagagtaagtcctttggaaattggaa
ggtttcagacaggacactttaggcaaatcccatcgtccatcacctctgcatcttatggttggcaaatggcgctgtacaaagccttccatgcagtggtatc
tgaccatagagtttatctcatagcgaggtttggcctttccaaaggtcttggcattttcaacaaaaggaggctgtccgcacgccactgttccctttttgca
ggtgtaagtaagatggtagttgcatggaacatcgttccactggccattctcgtgccaaataataacgacacaatcttcaccagctgagaagaaactgtct
ggttggtttggccgccagttttcatattgcattgtgcttccatcagtccaacggaagtcattctcaaacatcttatcattgaggccaatccactggtaat
catgccctaaacggttgacgaaagtctgttcgtcattggacataatacttgtcag
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | ![Expression Image Expression Image](image/thumbnail/XB-IMG-41414.jpg) |
Usage:
Suppliers: