XB-CLONE-3305538
Clone Name: IMAGE:7658934
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Gene:
mef2d
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC122909
[+]
GAAGGAAGGGGGCAAAGGGAGGAAATTAAGAGGGCAGCTCGGCGGCGGAGGCTGACACTGACACTGAGGCTGAGACTCTCTTTTCCAGGAGGAAGAAAAG
GAAAAAGGGAAGTGGCTGACAGTGACAAGCCGCTGCTGACGTCCTCCGCGGGCAGTGCTTCCCCCAAATGATGCTCTCCATTCTCGGCCAGAGGTTAGAG
TGAAGCCGGCCGAAAGCTTTCAGAACATCTGGAACCAGCGGGAGAATAACATGAACTGAAGGGGAAAAAGGGGGCTCGTTTTCAATTATTTCATGAACGC
ATTGTGAGAAAGCAGGAGGAGGGGGGTCAAACACGGGAACCCATTCGCCGCAAGGTCTTCGCTGGTCGGTGAGGATTGTTCAGGAATCATGGGGAGGAAA
AAGATCCAGATTCAGAGGATCACAGATGAACGGAACCGACAGGTGACGTTCACAAAGCGCAAATTTGGCCTGATGAAGAAGGCCTACGAGCTGAGCGTCC
TGTGCGACTGCGAGATCGCCCTCATCATATTCAACCACTCGAACAAGCTATTTCAGTACGCCAGCACCGACATGGACAAAGTGCTGCTAAAGTACACCGA
ATACAACGAGCCCCACGAGAGCCGGACTAATGCAGACATCATAGAGACATTAAGAAAGAAAGGTTTTAACGGGTGTGACAGCCCCGAGCCCGATGGGGAT
GACTCGATTGACCAGAGCCCCCTCATGGAAGACAAGTACCGCAAGGCCAGCGAGGACCTGGACATTCTGTTCAAACGATACGGTTCTGCAGTGCCAGCCC
CGAATTTTGCCATGCCGGTTACTGTACCAGTGACCAACCAGAATGCACTGCAGTTCAGCAACCCAGGTGGTTCCTTAGTCACACAGTCACTGATGACCTC
CTCATTGACAGACCCACGGCTCCTGTCTCCACCCCAACCGGCCTTACAGAGGAACACGGTATCACCTGGTCTACCTCAGAGGCCAGCCAGTGCAGGTGCA
ATGTTGGGAGGGGAATTGAACAACTCAAATGGAACGTGCCCAAGCCCTGTAGGAAATGGTTACATCAGCGCTAGAGCATCTCCGGGTCTGATACCAGTAT
CCAATGGGAACAGTCTGGGCAAAGTCATCCCGGCTAAATCTCCACCGCCTCCTAACCAAAATAGCCAGCTCGGAGCCAACAGCCGCAAACCAGACCTGCG
TGTTATCACCTCACAAGGCGGCAAAGGGTTGATGCATCATCTGACTGAGGAGCAGTTGGAGATGAGCGCCCAGCGGTTAGGAGGCGTCTCACAAGCGGCC
CATTCGCTCACCACCCCGGTCGTTTCAGTTGCGACTCCCAGTTTACTGTCACATCATGGACTGCCTTTCTCTGCCATGCCCACAGCATACAACACAGACT
ACCAGCTGACCAGCGCCGACCTGTCGTCCCTCTCTACATTCAGCTCTCCCAGCAGTTTGTCGCTCGGCAATGTGACTGCATGGCAACAGCAGCAACAGCA
GCAGCATCATCACCAAGCGCAACAACTCATCCCGGTGTCACTCAGTAACTTAGTGTCGAGTGGTCAGCTCCCACACACTGCCACCCTGACAGTCAACACC
AACCCCAACATCAGCATCAAGAAGGAACCACCGTCCCCGAACAGAGAGAGGAGTACGGGAACCCCACTGAGCTCCTTCCCCCACCAGAGCCGGCACGAAG
TCACCGGGCGCTCTCCTGTCGACAGCCTAAGCAGCAACGCCAGCTCATTTGAGGGGAACGACCGAGAGGACGTGCGGGGAGACTACACCTCGTCCCTCGG
CCTTCTGAGACCCTCGGGCGACACGGAGAGCGAGAGCCAATCTGTAAAACGCATGCGACTCGACGCATGGGTGACATAACCGTTCTTTGTTGTGACACTT
TATTCTTTCGCTCGCAGCCCACCTAAGGGCCGGGCAGAAGGGTGGAGTGCGACAAGGGAGGGTGGGGAGGGAAAAGGAATAGCCGCCAGTGGGATATATT
GCTGTAGGGTGGGAACCTATCATAAACTGCCTGAGATATAGCTTTAGTATTTGGTAGGCATTCTTCCTAGTCCAGTGCCCCTGGCAATGTCTGCAAAGGT
CACGGCACTCCATGGCTGCAGTGTATAACTCTGCTGTGTATAACCGCACATCTCCAGCACTCCAAAGATACCTGCTACCTTGTCGGAGTCTTCTTTAACT
GCAGCTGCTAAATATGCCCCCCCACACTGACTTTGGTTTGCCCTTTCCGCCCCTCTCACTGCCTTACCTCTTGCCCCCAACACCAACTTTGCCACTGTGC
TGGGGCAGCTTGAAATTCCGCAAGGGGCAGCAGCAGCAGAAGGAAACCTGGAGAGCCCTGTATTGTTATACACGGTGGTTCATTTACTGGCAGGATTAAT
ATAATGGTTTCAATCCCCATTTGGACCTCATTGCAGCAAGGGGCTGTTAGCGTACAGCGGATCCACGCCGCCTCAGAGAACTCTGCTTATTTACAAGCTT
CGGAGAGGTGTCACTCCTGTCCGTGAACATTGTGACGTCGTCCGACATTGTGACATCACCCGCTTAGCTTCATTTTCGCCTATTTATCCGCGGTGAAACG
CTCACGTAGGAAACGCTGGGTTACGTACGGACAATGGATTCAGCCGTATACAGCTCAGCGCAGCATTAACCTTTCACCGAGAGATATATTCAGGGTCTAT
GCCAGACGGAGCCTGCCTCCTCCTCATCCTCACAGCGGAGATAAAGGCAAAGCAACACCGTCCAGACGTTTCCCGTCCCAGAAAGGAATCCCACGCCATG
ATCTTTCCGGCTTCAAACCCACGGTGCATATCAAGTCTGCATGTTCACCCCCCTCCCTCCCTGCCAGCCATGGAGTTCTGTATAATGCAGACATTGCCTT
TTTTAAGAGAGAAAAAAAAAAAAAAA
5' EST: CX838449
[+]gtcggtcggattccgggattcgtcgaccccgcgtccggaaggaagggggcaaagggaggaaattaagagggcagctcggcggcggaggctgacactgaca
ctgaggctgagactctcttttccaggaggaagaaaaggaaaaagggaagtggctgacagtgacaagccgctgctgacgtcctccgcgggcagtgcttccc
ccaaatgatgctctccattctcggccagaggttagagtgaagccggccgaaagctttcagaacatctggaaccagcgggagaataacatgaactgaaggg
gaaaaagggggctcgttttcaattatttcatgaacgcattgtgagaaagcaggaggaggggggtcaaacacgggaacccattcgccgcaaggtcttcgct
ggtcggtgaggattgttcaggaatcatggggaggaaaaagatccagattcagaggatcacagatgaacggaaccgacaggtgacgttcacaaagcgcaaa
tttggcctgatgaagaaggcctacgagctgagcgtcctgtgcgactgcgagatcgccctcatcatattcaaccactcgaacaagctatttcagtacgcca
gcaccgacatggacaaagtgctgctaaagtacaccgaatacaacgagccccacgagagccggactaatgcagacatcatagagacattaagaaagaaagg
ttttaacgggtgtgacagccccgagcccgatggggatgactcgattgaccagagccccctcatggaagacaagtaccgcaaggccagcgaggacctggac
attctgttcaaacgatacggttctgcagtgccagccccgaattttgccatg
3' EST: CX838448
[+]cttaaaaaaggcaatgtctgcattgtacagaactccatggctggcagggagggaggggggtgaacatgcagacttgatatgcaccgtgggtttgaagccg
gaaagatcatggcgtgggattcctttctgggacgggaaacgtctggacggtgttgctttgcctttatctccgctgtgaggatgaggaggaggcaggctcc
gtctggcatagaccctgaatatatctctcggtgaaaggttaatgctgcgctgagctgtatacggctgaatccattgtccgtacgtaacccagcgtttcct
acgtgagcgtttcaccgcggataaataggcgaaaatgaagctaagcgggtgatgtcacaatgtcggacgacgtcacaatgttcacggacaggagtgacac
ctctccgaagcttgtaaataagcagagttctctgaggcggcgtggatccgctgtacgctaacagccccttgctgcaatgaggtccaaatggggattgaaa
ccattatattaatcctgccagtaaatgaaccaccgtgtataacaatacagggctctccaggtttccttctgctgctgctgccccttgcggaatttcaagc
tgccccagcacagtggcaaagttggtgttgggggcaagaggtaaggcagtgagaggggcggaaagggcaaaccaaagtcagtgtgggggggcatatttag
cagctgcagttaaagaagactccgacaaggtagcaggtatctttggagtgctggagatgtgcggttatacacagc
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
Suppliers: