XB-CLONE-3306769
Clone Name: IMAGE:7657944
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Gene:
atp1a2
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC136137 [+]
CACACACAGGCAGCTATTTAAGGAAAGAATTCTTACATTTCCCTTTATTTGGGGATTTATTTATTTTTTTAATTTGTGATTTTTTTTTTCTTCCCCCCCC
CCCGAGATCGGATTCTGCCGGGAGTAAGAAAAAGATGGGGCGAGGGGAGGGACGGGAGTATTCTCCCGCGGCGACCAACGCGGACAATGGAGGGGGCAAG
AAGAAACAGAAAGAGAAGGAGATGGACGAGCTGAAGAAGGAGGTGGCCATGGATGATCACAAGCTCTCCATGGAAGAGATTGGCCGGAAATATGGGACAG
ACCTGGCTAAGGGATTGACAAATGCTCGTGCAGCAGAGGTCCTGGCCCAAGATGGACCCAACGCCCTTACACCACCACCAACCACTCCGGAATGGGTGAA
GTTTTGCAGGCAGCTCTTTGGCGGGTTCTCCATTCTCCTTTGGATTGGCGCTATTCTGTGCTTTCTGGCTTACGGCATTCAGATCGCCATGGAGGATGAG
CCAATCAATGACAATCTGTACCTCGGAGTGGTCTTAGCTGCTGTCGTCATTGTCACTGGCTGCTTCTCTTATTACCAAGAGGCAAAAAGTTCCAAGATCA
TGGATTCCTTCAAGAACATGGTGCCACAGCAAGCCTTGGTTATCCGTGAAGGAGAGAAGCTCCAGATAAATGCTGAGATGGTGGTGGTCGGGGATCTGGT
GGAAATTAAAGGAGGAGATCGAGTACCGGCAGACATAAGGATAATTATAGCTCATGGGTGCAAGGTGGATAATTCCTCTCTGACGGGAGAGTCTGAACCC
CAGACTCGCTCTCCTGAATTCACCCACGAGAACCCCCTTGAGACCAGAAACATTTGCTTCTTCTCCACCAACTGCGTTGAAGGTACCGGCCGAGGAATAG
TTATTAATACAGGAGACCGCACCGTCATGGGACGCATTGCCACTCTAGCTTCAGGTCTTGAAGTAGGCCGCACTCCTATCGCCATGGAGATTGAGCACTT
CATTCACATTATAACTGGGGTGGCTGTTTTCCTCGGAGTCAGTTTTTTTGTCCTTTCCCTCATTCTTGGCTACAGTTGGCTAGAAGCTGTGATCTTTCTC
ATTGGCATCATTGTGGCCAACGTGCCAGAGGGTCTTCTGGCAACAGTTACGGTGTGTCTGACTCTGACTGCCAAAAGAATGGCCCGCAAGAACTGTCTGG
TGAAGAACCTGGAAGCTGTGGAGACTCTTGGTTCCACCTCGACCATCTGCTCCGATAAGACTGGAACTCTGACGCAGAATCGTATGACTGTGGCTCACAT
GTGGTTCGACAACCAGATTCACGAGGCTGACACCACCGAGGACCAGTCAGGCACAACATTTGATAAACGCTCCCCTACCTGGACTGCTCTGTCTCGGATC
GCCGGCCTGTGCAACCGCGCCGTCTTCAAAGTGGGACAAGAAAAAGTGGCTGTGTCAAAGAGAGACACGGCTGGAGACGCCTCGGAATCGGCTCTGCTGA
AATGCATCGAGTTGTCCTGCGGCTCGGTACGGAAATTACGGGACAGGAACCCCAAAGTGGCTGAAATCCCATTTAATTCTACAAACAAGTTCCAGCTGTC
TATTCATGAGAGGGAAGACAGCCCCGAGGGCCACCTACTGGTGATGAAGGGGGCACCGGAGAGAATCTTGGATCGCTGTTCCACCATAATGCTACACGGG
GCAGAGCAGCCCTTGGATGAGGAGATGAAGGATGCCTTCCAGAATGCCTACTTCGAACTGGGAGGCCTAGGAGAGAGAGTTCTAGGGTTCTGCCACTTGT
ACATACCGGCTGATAAGTTTCAACGCGGGTTCAAGTTTGACACTGACGAGCCCAATTTCCCCTTAACCGACCTTTGCTTCATTGGCCTCATCTCCATGAT
TGATCCCCCCAGAGCAGCGGTACCTGACGCCGTGGGAAAATGCCGCAGTGCAGGGATCAAGGTGATCATGGTAACTGGTGACCATCCAATCACAGCAAAG
GCCATAGCCAAAGGCGTGGGCATTATCTCTGAGGGGAATGAGACAGTGGAGGATATAGCCGACAGGCTGAACATACCAGTTAACCAGGTGAACCCAAGAG
AGGCAAAGGCTTGTGTGGTCCACGGCTCCGATTTGAAGGACATGACCTCTGAACAACTGGACGACCTCCTGAAGAATCACACGGAAATCGTGTTCGCTCG
GACCTCCCCCCAGCAGAAGCTGATCATTGTCGAGGGCTGTCAGAGGCAGGGGGCAATCGTGGCAGTCACGGGGGATGGTGTAAATGACTCCCCGGCTCTA
AAGAAAGCAGATATCGGGGTGGCTATGGGAATCGCAGGATCCGACGTCTCCAAACAGGCAGCCGACATGATCCTATTGGACGATAACTTTGCTTCCATCG
TGACGGGGGTAGAAGAAGGGAGACTTATTTTTGACAACCTGAAGAAGTCCATCGCCTACACCCTGACCAGCAACATCCCTGAGATAACCCCTTTCCTACT
CTTCATCATCGCCAACATTCCGCTGCCACTGGGCACAGTCACCATCCTCTGTATCGATCTCGGAACTGACATGGTGCCCGCCATCTCTCTGGCATATGAA
GCGGCTGAGAGTGACATTATGAAGCGGCAGCCAAGGAACCCGCGGACGGACAAGCTGGTGAATGAGCGGCTAATCAGCATGGCCTATGGGCAGATCGGTA
TGATCCAAGCCTTGGGCGGGTTCTTCACCTACTTTGTAATCCTGGCGGAGAATGGATTCCTGCCCTCCAGGTTGCTGGGAATCCGCTTGGACTGGGATGA
TCGCTCCAATAATGACGTGGAAGACAGTTATGGGCAGGAGTGGACCTATGAACAGCGCAAAGTGGTGGAGTTCACGTGCCATACTGCATTCTTTGCTAGC
ATTGTGGTGGTGCAATGGGCTGATCTAATCATCTGTAAAACCCGAAGAAACTCGGTGTTCCAGCAGGGGATGAAGAATAAGATTCTCATCTTTGGTCTTC
TTGAAGAGACCGCCCTGGCTGCCTTCCTGTCATACTGTCCCGGAATGGATGTGGCTCTGAGAATGTATCCTCTCAAGGTGACCTGGTGGTTCTGTGCGTT
CCCCTACAGCCTGCTGATATTTTTGTATGATGAAGTGAGGAAGCTGATCCTGAGACGTGATCCAGGCGGCTGGGTGGAGAAGGAGAGCTACTACTGAGTT
GCCTGCCCCCACTGGAACTGGCTTGGGGAAGAGAAAACGTTTTGTAGATGCCTCGGCTTTGGGTTACTCACATAGGGTTTGTATTTAAAATAGGGGAGTA
AATGGGAGAGCGAGAAGACCTGACCCAGTGAGCTGAGTTATCTTTTCGGTCAATTTTCCATTCTTCAGAGCAGGACGAATTATTCAATCTGATGACTTTT
ATAACAAAGTTGTTCCACCGAGCCAAGAATTACGGAAGCCCCTCCGGAACTAACCATAGCATGGGTTGAAATGAAAGTGTTCTTCCAGTGACCCTAGTGT
CTTCTAACATATCCATGAATAATCTGCCATGCCAGCCTTCATTCTTATTACTACTTGCCCTTTGCCCTTCTTGTACAGTGACTCTCCTCTCCCTGTTTTT
ATCAAGCCACAGAGTTATATATACAACAAACAATAAACATATATGCATTACATTTTAAAAAAAAAAAAAAA
5' EST: CX836460 [+]cacacacaggcagctatttaaggaaagaattcttacatttcccttgatttggggatttatttatttttttaatttgtgattttttttttcttcccccccc
cccgagatcggattctgccgggagtaagaaaaagatggggcgaggggagggacgggagtattctcccgcggcgaccaacgcggacaatggagggggcaag
aagaaacagaaagagaaggagatggacgagctgaagaaggaggtggccatggatgatcacaagctctccatggaagagattggccggaaatatgggacag
acctggctaagggattgacaaatgctcgtgcagcagaggtcctggcccaagatggacccaacgcccttacaccaccaccaaccactccggaatgggtgaa
gttttgcaggcagctctttggcgggttctccattctcctttggattggcgctattctgtgctttctggcttacggcattcagatcgccatggaggatgag
ccaatcaatgacaatctgtacctcggagtggtcttagctgctgtcgtcattgtcactggctgcttctcttattaccaagaggcaaaaagttccaagatca
tggattccttcaagaacatggtgccacagcaagccttggttatccgtgaaggagagaagctccagataaatgctgagatggtggtggtcggggatctggt
ggaaattaaaggaggagatcgagtaccggcagacataaggataattatagctcatgggtgccaggtggataattcctctctgacgggagagtctgaaccc
cagactcgctctcctgaattcacc
3' EST: CX836459 [+]tttttttttttttttaaaatgtaatgcatatatgtttattgtttgttgtatatataactctgtggcttgataaaaacagggagaggagagtcactgtaca
agaagggcaaagggcaagtagtaataagaatgaaggctggcatggcagattattcatggatatgttagaagacactagggtcactggaagaacactttca
tttcaacccatgctatggttagttccggaggggcttccgtaattcttggctcggtggaacaactttgttataaaagtcatcagattgaataattcgtcct
gctctgaagaatggaaaattgaccgaaaagataactcagctcactgggtcaggtcttctcgctctcccatttactcccctattttaaatacaaaccctat
gtgagtaacccaaagccgaggcatctacaaaacgttttctcttccccaagccagttccagtgggggcaggcaactcagtagtagctctccttctccaccc
agccgcctggatcacgtctcaggatcagcttcctcacttcatcatacaaaaatatcagcaggctgtaggggaacgcacagaaccaccaggtcaccttgag
aggatacattctcagagccacatccattccgggacagtatgacaggaaggcagccagggcggtctcttcaagaagaccaaagatgagaatcttattcttc
atcccctgctggaacaccgagtttcttcgggttttacagatgattagatcagcccattgcaccaccacaatgctagcaaagaatgcagtatggcacgtga
act
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Suppliers: