XB-CLONE-3308825
Clone Name: IMAGE:7656349
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Gene:
c4h1orf21
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC123935
[+]
CTCAGCTCTGCGCTCCGTGTCCCCGCTCTGCCCAGTGCCTGCCCCACTGGAACCCCCGTCCCAAGCCCCGGAGCAGCACCTCAGCAAGGTTCAGCAATGA
TGGACACATTCTTGGGTTTTTGGCACCACTTGTCAGCGTCTCACTAGAAATGTTTTTTCCAATCAGTCAGTCTGGAGCTGACTGATAAATATGGGATGTG
CTTCGGCAAAGCATGTATCTACAGTACAAAATGAGGACGATGCACAGAACGGCAAAAATTACCAAAATGGAGATGCCTTTTGTGATGAATACAGGATTAA
GCCAGTTGAAGAAGTCAAATACATGAAAAATGGGGAAGAAGAGGAGCAGAAGGTTGTTTCAAGGAACCAGGAGAACTTGGAGAAAAGTGTCACCCATGCT
GCCCGATCCAGAAGTAACGTTGAAGCTGCAGGCGCAGGACATCCCTATCGAATAAATATCCACATCTCTGAGAGCCAGCAGGAGTTCTTCAGGATGCTGG
ATGAAAAAATTGAAAAGGGACAAGATTACTGCTCAGAAGAGGAGGATATAACATAGCTTCAATTCAAAATATGTGTAAATATCTTAACACACCGAGTGGG
GCTCTGGCAATGTATCTCCCTAAATGCTACAGCAAAATGCCGCTGTGGACTCCTATCGTTTTGCTGCGAACCTAGAACATTGTCTCTCTGCAATTGTTTC
TATCGCATCTTTTATTGCGGCACACTGTCTTCTACTAAGAAGCTCGATGGGTTTGGTAGGAGATTTTATTGCTTCCGATTTGGATATAACTATTTCACAA
CCGGAGGAGCCAATCAATGTATTCCTTGGCCTAAAAGCACCAGTGGAGTGAGGGTTTAACTTGGCCAAAAAGGAACTAATATTGATGATCTCCGTATCAC
GGACTGCTTCCTGTTTCTTCCTCCTGCTGTGTTTCAGGAAAAGATGTTCCAACCGGTAGTGGAGGGATTTGAGATGTCGTTTGTTCTAATTGCACATACC
ACAGTCTGCAAATCATATGAATCTCCCACATTTTTTTCTACTAAAATAAATGTTAGTGAGTTTATGTTTTTTTTTTTTTTTATGTTTTGGGGGTTTTGCA
GACATTGTTCTGGCATTTTAACCACATGCATTACATATATGTGCCTAAGTGTGGGTAATTAGTTATCATTATGGCTGTATGCACATTTTGCTTTTGTGAC
ATGAGGCAGAGGTGCTTCTGGGTAGAAGCTACAGTGCAGGCTGCTGTGATTGTATGTACAAGTTCTCTATGTAACTGTGCTCCATGCAGACAATTATTCA
TTAGAACATAAAATGCTAATGTTTGGATAACGTTTCAGTCTGTTTCCAAAAGTACCTGCCAGACGTGAGCAAATGCGGGAGCCATGTTTGAGCGACAATC
GCCCATCGGAACAGGCAGCATCTACATAAAGTGAATGGGTGCAATTTAAAGCATGTAGTCCCCCACCTGCAGTGCTACAAAACACTGCAGATCACCCTGT
GTGGCATTACCCTAAAGCAGAATATTAGGCATGATCAGTGGTCTTAATATAAGTCACTAGTAATGAGTGGCAGAACTGTGTGAAAATGCCCGGTGTATCC
CAGCAAATGTAACAGCAGAAAACTGGCTCTAACTAAACGCCTGTCATAAACAATGTGCAGTGTTCTCAGGTGAAAACTTGTAATTTTCTTTTCTTGATCC
TTTTTACATTCACACTGAAGGCTTTGGTTGTGTCCAGTTTATATTTGTTGCTCCTACTGGTCGGATGGAAGAAATCCCCATTGACTTCTATGAGAATATG
TTGTGCTCTCTGGAGACTACACGAACTGTAGGTCCAGAGCAGCTGGTGGGCCCCCATATTGTAGCTCCTGCCTAACTAGTCTGAAGCGAGGGAGTTGTGT
GAATGCATAAATGTGTTGTTGCCTGTAGCCCATCAGCATATATACATCAGTGCTGCTGTCATACTGGGTGAGTACATACACTGAGCTTAGCTTTTATTTC
TCCTGATAGACTTTCTGGTCTTGTCTATGGAAGTATGTTGACTGTCGAACAACAGCAGTGACCTAATATTTTTTTTTTTCCCACGTACACTGGCTATTTA
TGTTATGCACAGATGGAATATTGCTGTCTGCCTCTTGCTCCATTCGCTCCCCCCACTGTGAGAAAGACCCATTTAACTCAAGTCAGGGAATGAAGGGATA
AGGGATTGTATTCTGGCAAAGGGCTGCTCATGGCATGCGTTCACAAAGTAAAGTGTGTGCGTTCACATATACATCAAGATACTGGTGCAGCTTCCCCTCA
CATTATCATGCCGTATTTATTCAGTATAACAGTGGGTGCACGCTCAATCTCTGTTTTGTGTCCCATTTGCTTACATCATGTTGCTGAGTATCCCACCATT
ATCCCCCAAGTTCTGAAGTGCCTCGGGCAGTTATTCAATTCATATACATGAGTTGGGGTTTTCACTTTCAAGGGTTTCATCTTGAGACGTGCCCAGTATA
TACAAGAATTTATGGACCGGTTTATAAACTGTAGAAATAAGAATCCCCTCTTTCCTAAGGGCTTTCATTGACAAAATTAGTAGTTCACTTTTAAAGGGAA
ATGACACCTCCCCTTTTGACATAAGCTCATTCAGTTGGGCTTATGATAAAAATGTGTATAAACCCTATGTGGACTGCCAGAAATAAATATAAATGTATGA
TTGCACAGACATACCTGTTTATACCTGTTTATCACCTTGTTTTGTTGTGAAATGATGGATTCTGGCACTTGAAGTCCCCCTTGCTTTCCAGAGAATCTGG
ACATGTAGATAAATGGGGAGCACAAGTCACACTTTAACTGTGCAAATGGTTCTTGGTGGTGCTGCTCCTGGACACACCGCTACATCACCATTAGACACCA
ATATTGTATGAAGTTGAAGCACTCTGCATTTCTTGCTTTGCAATTTGTAATTTTATTTAGCCAGTTTTACCGCAAGAACAACATTTCAGGGGAGTCTGCA
CCACCTAGCCTGACAAAAGAAGGTGCAGACGCCCCAATTGTTGTTCTTGTTGTGTAACTAAATTAACAAATTGCAAAACAAGAAATGGTGAGTGTGTTGA
CATAATACAATTTTTGGATCCAGAGAATCTGGGCACCACCCGTTATGGAAAGCACAGGTCCTAGAATCCATCACTTCCCAACTAAACAATGTGAGGGGAG
GGGATGAGTTACACTATGAGCCTAAGGAGGGGGTTGTGTGAATATCATGGTTTCCTTTCAATCTGCTGAATCAGGTCTGTATGAAAAGAAATACATTTAT
ATTTGGTGGTTCAGATCATGTTTATGCTTTTCTACATAAGCTCAACTGACGTCATTTTAAAATAGGGGTAAAATATTTAGTATAATGTAAAAAAAAAAAA
AAA
5' EST: CX827113
[+]ctcagctctgcgctccgtgtccccgctctgcccagtgcctgccccactggaacccccgtcccaagccccggagcagcacctcagcaaggttcagcaatga
tggacacattcttgggtttttggcaccacttgtcagcgtctcactagaaatgttttttccaatcagtcagtctggagctgactgataaatatgggatgtg
cttcggcaaagcatgtatctacagtacaaaatgaggacgatgcacagaacggcaaaaattaccaaaatggagatgccttttgtgatgaatacaggattaa
gccagttgaagaagtcaaatacatgaaaaatggggaagaagaggagcagaaggttgtttcaaggaaccaggagaacttggagaaaagtgtcacccatgct
gcccgatccagaagtaacgttgaagctgcaggcgcaggacatccctatcgaataaatatccacatctctgagagccagcaggagttcttcaggatgctgg
atgaaaaaattgaaaagggacaagattactgctcagaagaggaggatataacatagcttcaattcaaaatatgtgtaaatatcttaacacaccgagtggg
gctctggcaatgtatctccctaaatgctacagcaaaatgccgctgtggactcctatcgttttgctgcgaacctagaacattgtctctctgcaattgtttc
tatcgcatcttttattgcggcacactgtcttctactaagaagctcgatgggtttggtaggagattttattgcttccc
3' EST: CX827112
[+]tttttttttttttttacattatactaaatattttacccctattttaaaatgacgtcagttgagcttatgtagaaaagcataaacatgatctgaaccacca
aatataaatgtatttcttttcatacagacctgattcagcagattgaaaggaaaccatgatattcacacaaccccctccttaggctcatagtgtaactcat
cccctcccctcacattgtttagttgggaagtgatggattctaggacctgtgctttccataacgggtggtgcccagattctctggatccaaaaattgtatt
atgtcaacacactcaccatttcttgttttgcaatttgttaatttagttacacaacaagaacaacaattggggcgtctgcaccttcttttgtcaggctagg
tggtgcagactcccctgaaatgttgttcttgcggtaaaactggctaaataaaattacaaattgcaaagcaagaaatgcagagtgcttcaacttcatacaa
tattggtgtctaatggtgatgtagcggtgtgtccaggagcagcaccaccaagaaccatttgcacagttaaagtgtgacttgtgctccccatttatctaca
tgtccagattctctggaaagcaagggggacttcaagtgccagaatccatcatttcacaacaaaacaaggtgataaacaggtataaacaggtatgtctgtg
caatcatacatttatatttatttctggcagtccacatagggtttatacacatttttatcataagcccaactgaatgagcttatgtcaaaaggggaggtgt
catttcccttttaaagtgaactacta
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
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