XB-CLONE-3620423
Clone Name: IMAGE:7671576
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Gene:
krt61
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC121489 [+]
GTTTGCTCATCCTCAGCATCAAAGTTTCAGAGCTTCTGCAGCAGTACCATGTCTGTGTCTCGCCAAACTGTCTATTCCACTGGAGGTACCAAAAGATTCA
GTGCTTCTTCTGCTGTACCATCAGGGGGAACCCGAAGCAGCTTTAGCACTCTCTCTGTCTCTCGTGCTGGTGGTGGAGGTGGCCGTGCTAGCTATGGTGG
CTATGGTGGCTTTGGGAGCAGAAGCCTTCAAAATGCTGGTGGATCTAGGAGAATTGCTGTTAGTTATGGGGCACCATCCCATTTTGGTTTCAAGAGTTCC
GGCATTGAGTCTCACATTGGTGGCAACTATGGTTCAGATATGATGTCTGGAATTGGCATGGGTCAGGGTCCCTTCGGTGGTCCTGGATTTCCAGTGTGTC
CACCTGGCGGCATCCAAGAAGTAACTGTTAACCAGACCCTGTTAGCACCCCTTAATCTGGAAATTGATCCATCTATACAGAGAATTAGAACAGAAGAGAG
AGAACAAATTAAAACCCTCAATAACAAGTTTGCCTCTTTTATTGACAAGGTTCGGTTCTTAGAGCAACAGAACAAAGTTCTGGAGACAAAATGGAACCTC
TTGCAAGAACAGGGGGTAAAAAGTGTGAAGTGTAATATTGACCCTCTGTTTGAAGCTTACATTAGTGCCCTGAGAAGGCAACTGGATAGCTTGTTAAGTG
AAAAAGTTCGTTTGGATTCAGACCTAAGGCAAATGCAGGATGCTGTAGAAGATTACAAGAAGAAATATGAAGATGAAATCAACAAACGCACCTCTGTAGA
GAATGAGTTTGTGGTCCTGAAAAAGGATGTGGATGCTGCTTACATGAACAAAGTGGAGCTGGAGGCGAAGTTGAATGCTCTGACAGATGAGATCAACTTT
TTACGAGCCGTCTATGAAGCGGAGATTGCCCAGATGCAAACTCAAATCTCAGATACTTCAGTTGTCCTGTCCATGGACAACAACAGGACCCTGGACCTGA
ATGGTATCATTGCTGAGGTGAAGGCTCAATATGAGGATATCGCTAACAGAAGCCGGGCAGAGGCAGAGTCCTGGTACCAAACCAAATATGAAGAACTACA
ACAGTCAGCCGGGAGACACGGTGATGATCTCAGAAGTACCAAGACAGAAATCTCCGAGCTAAACCGTATGATTAACAGGCTACGATCTGAAATTGACAGC
GTGAAAAAACAGTGTGCCAAACTACAAGCTGCCATTACTGAGGCTGAGGAACGTGGGGAACTTGCCCTGAAGGATGCCAAGAAAAAGTTGGCAGACCTGG
AGGAAGCTCTTCAGAAATGCAAGCAGGAAATGGCTCGGCAGCTCCGGGAATACCAGGAACTCATGAATGTGAAACTGTCTCTAGATGTTGAAATTGCCAC
CTATCGAAAACTGCTGGAAGGAGAAGAGTGCAGGTTGGCAGGAGAAGGCGTTGGACCTGTAAATATATCTGTCGTGAGCTCTAGCTATGGGGGCGGCAGT
GGAAGTGGAAGTGGCTATGGAATGGGAGGCGGAAGCGGCTTCGGAGGCGGAAGTGGCTTCGGAGCTGGAAGTGGGTATGCCATTGGCGGAGGACAAAGCT
TTGGAGGCGGATCAGTTTCCGGGGGTATGGGAGGAGCCAGCTTTTCTGTAAGCAGCGGGAAAATGGCAGCCTTTGGCCCTGGAAGCGGGAGCAGTTCCAA
TGTGAAAATTATATCAAAAACCTCCACAAGCTCTAGAAAGCTTTAATCTCACTTCCCAAACCAACACACATGGCAGTAATAATGCCAGCTTCATGTTCCA
AACATGCCTGTAACCCCACACATGCCTAGGGATAAAGCATACCCGCTGTGTTATAGGCACTTACAGTCATGTCATGCACAAGCCTTTGCATTCTGGTATT
TCACTGCATCCACAGATTCCCTGTCTTAAAGAATTTAGATAACACTTTAAGGCAGTCCCCACAAACAAAACATACACAGGAGAGAAAACAATATTGTTTA
GAGAGCAGATCTTTACAGAAAGTTTCATGATCTGGTTATTATTCTGGAAATGCCCCAATTTGCCACAGTTTTCAACTTAATGCTTCTACCAATACATCCT
TTCTTTCTGACGTTTTCTTAATAAACTGCAATCATTCTAAAGCAAAAAAAAAAAAAAAAAAAAAAA
5' EST: CX880050 [+]tttgctcatcctcagcatcaaagtttcagagcttctgcagcagtaccatgtctgtgtctcgccaaactgtctattccactggaggtaccaaaagattcag
tgcttcttctgctgtaccatcagggggaacccgaagcagctttagcactctctctgtctctcgtgctggtggtggaggtggccgtgctagctatggtggc
tatggtggctttgggagcagaagccttcaaaatgctggtggatctaggagaattgctgttagttatggggcaccatcccattttggtttcaagagttccg
gcattgagtctcacattggtggcaactatggttcagatatgatgtctggaattggcatgggtcagggtcccttcggtggtcctggatttccagtgtgtcc
acctggcggcatccaagaagtaactgttaaccagaccctgttagcaccccttaatctggaaattgatccatctatacagagaattagaacagaagagaga
gaacaaattaaaaccctcaataacaagtttgcctcttttattgacaaggttcggttcttagagcaacagaacaaagttctggagacaaaatggaacctct
tgcaagaacagggggtaaaaagtgtgaagtgtaatattgaccctctgtttgaagcttacattagtgccctgagaaggcaactggatagcttgttaagtga
aaaagttcgtttggattcagacctaaggcaaatgcaggatgctgtagaagattacaagaagaaatatgaagatgaaatcaacaaacgcacctctgtagag
aatgagtttgtggtcctgaaaaaagatgtggatgctgcttacatgaacaaagt
3' EST: CX880049 [+]gctttagaatgattgcagtttattaagaaaacgtcagaaagaaaggatgtattggtagaagcattaagttgaaaactgtggcaaattggggcatttccag
aataataaccagatcatgaaactttctgtaaagatctgctctctaaacaatattgttttctctcctgtgtatgttttgtttgtggggactgccttaaagt
gttatctaaattctttaagacagggaatctgtggatgcagtgaaataccagaatgcaaaggcttgtgcatgacatgactgtaagtgcctataacacagcg
ggtatgctttatccctaggcatgtgtggggttacaggcatgtttggaacatgaagctggcattattactgccatgtgtgttggtttgggaagtgagatta
aagctttctagagcttgtggaggtttttgatataattttcacattggaactgctcccgcttccagggccaaaggctgccattttcccgctgcttacagaa
aagctggctcctcccatacccccggaaactgatccgcctccaaagctttgtcctccgccaatggcatacccacttccagctccgaagccacttccgcctc
cgaagccgcttccgcctcccattccatagccacttccacttccactgccgcccccatagctagagctcacgacagatatatttacaggtccaacgccttc
tcctgccaacctgcactcttctccttccagcagttttcgataggtggcaatttcaacatctagagacagtttcacattcatga
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 2-3 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn3 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Suppliers: