XB-CLONE-3640987
Clone Name: IMAGE:7660165
|
Gene:
nell2
|
Species: Xenopus tropicalis
|
|
|
Sequence:
Full length sequence: BC128627
[+]
CTTTCCTAAACGAGCTTAAAAAGAACAGGGCAACGCGGCGCCTGGCACACCTAGTAATGTGAAGGGATGCCCATATGTACCAATAAGCCCAGTCATTCAC
CCACCCCCATGCCAATCACTAGAGGACACAACCTGTGCCGCTGAGCAGTCGGATTCTGCCTGCAAAAACGCTCAGATCAGCTGCTGGAAGGGGCGCTTGT
TCACTCCCTCAGAGAAAAGGGACAGTGGAGCCTGTGCCTCCCCCTCCCTCCTGAATCCCTGGAGTAGCAATTAGTGTGGCTCTCCGAGCAGCTCCGGCGG
AGAGGAATATCCATTGTCTCTAACAGGTTCGGAGCGAGGATTTCCCTGTTCCCCAGATTCCCCTTTGCAGGCAGATCGTTCCCGAGTCCCCGAGTCCCTG
CTGTGGGGTGGGTAGGGGTCGGACCGAGGCTGCCGCCGGGCACTTATTGGGCAGCCCTGCCTAGCTGGGTGCTGTTGGAGCTAATGATGCTAGCGCTGGG
GATTCCAAGTTGCTGGCTCATCCGCTGGCTGCCTGTGCTGTTCTAGGAGGGAGCCCGGCACTCACAGCAGCGCTACACTAGCAGCAGGCACGGAGATTAT
GGACTAAGTGCATCGGTGCCAGAATGGAGTTTATATTGGGCATATTCTGCGTTATTTTCTGTCTCAGAGCAGGTGCAGGCTTTGGTGTGGACCCCTCCCT
GCAGATAGACATCTTCGAGGACTTCCAACTGGGAGAGGCCACCCCTGGAGTGCAGCAGGTTCAAGGATTCCATAACCGGAGCAAAGCCTTCCTTTTTCAA
GATACATCCAGAAGCATAAAAGCCTCAGCAGAAACTGCAGAAAGAATTTTCACGAAGCTGAGAAATAAACATGAATTCACAATTTTGGTGACTTTAAAGC
AGGCCATGTTAAATTCAGGCGTTATTCTTTCTATCCACCATGCAGATCACAGATATTTGGAACTGGAAAGCAGTGGGCATAGAAATGAAGTCAGATTACA
TTACCGCTCAGGAAGCCATCGGTCCCAAACGGAAGTCTTCCCTTACATTTTGGCAGATGATAAATGGCATAGATTCTCAATAGCAATCAGTGCATCACAT
CTGGTTTTGCACATTGACTGTAACAAGATTTATGAAAGAATTGTGGAAAAAACATTCATGGATGTACCACCAGGGACAGCATTATGGGTGGGACAGAGAA
ATAATGTGCATGGCTATTTTAAGGGTATAATGCAAGATTTACAAATAGTTGTCATGCCACAAGGGTTTATCTCACAGTGCCCTGATCTTAATCGCACATG
CCCTACATGTAATGACTTCCATGGACTCGTGCAGAAAATTATGGAGCTACAAGACATATTGGCCAAGACATCAGCCAAGCTGTCAAGAGCTGAGCAGAGG
ATGAATAGGTTGGATCAGTGCTATTGTGAGAGGTCTTGCACAGTAAAGGGCAACATCTACAGAGAGCTGGAATCTTGGATGGATGGATGCAAAAAATGTA
CATGCACGAATGGGACTGCTCAGTGTGAAACACTTACCTGTTCTGTGCCCAACTGTTTGAGTGGTTTTGCTCCTGCATATGTTCCTGGCAAATGCTGCAA
AGAATGTCAACCTGTCTGCATGTATCAAGGCCAAATGTACTTTGAAGGGGAACAAGAAGCTGTCCAGTCTAGCTCAGGAGCTTGTGTACTGTTTCAGTGC
AAGAGTAATACAATGCAGCGAATTGAATCACCAGAATGTTTGCCACTGAACTGTCCCCAATCACAGCATATCACTTTGCGGAGCGGTTGTTGCAAAGTTT
GCAAAGGACATGACTTCTGTTCAGAAGGACACAACTGTGTGGAATATTCCATCTGTAAGAACCTAAATGACAAAGCTGTTTGCATTTGTCGTGATGGTTT
TCGGGCCCTTCGAGAAGATAGTGCCTACTGTGAAGATATTGATGAGTGCACTGAAGGCCGTCATTACTGTCGGGAAAATACAGTGTGTGTGAATACTCCG
GGCTCCTTCATGTGCGTCTGTCAAACTGGCTATTTAAAAATTGATGATTACTCTTGCACAGAACACAATGAGTGTGCAACCAACCAGCACAGCTGTGATG
AAAATGCAGTGTGTTATAACACAGTGGGAGGACATAACTGTGTCTGCCAGCCTGGATATACAGGAAATGGCACTGTCTGCAAGGCTTTCTGTACGGATGG
CTGCAGAAATGGAGGCACCTGCATAGCTCCTAATATTTGTGCATGCCCACAAGGCTTTACGGGGCCCAGCTGTGAAGCAGACATTGATGAATGCACTGAA
GGTTTTGTTCAATGTGACAGCCGCGCTAACTGCATTAACCTACCCGGCTGGTACCACTGTGAATGCAGAGACGGCTACCATGACAATGGAATGTTTTCCT
TAAGCGGAGAGTCATGTGAAGACATTGATGAATGTGCTACGGGAAGGCACAGCTGCAGTAATGACACTGTGTGCTTCAATTTGGATGGTGGATTTGATTG
TCGCTGTCCACATGGAAAAAACTGTTCTGGTGACTGCACACATGAAGGAAAGATTAAGCACAATGGGCAGATTTGGGTGTTAGAAAATGATCGCTGCTCT
GTTTGCTCCTGTCAGGTTGGGTTAGTAATGTGTCGCCGTATGGTTTGTGATTGTGAGAATCCAACTGTTGACCTTTTTTGCTGCCCTGAATGTGACCCAA
GGCTAAGTAGCCAATGTTTGCACCAAAGTGGAGAGTTGACATATAAAAGTGGAGACACATGGGTACAAAATTGCCAGCAGTGCAGATGCTTACAAGGTGA
AGTTGATTGCTGGCCCCTGCCATGCCCAGAAATTGACTGTGAATTTAGCGTGGTTCCAGAAAGTGAATGCTGCCCACGTTGCATCAGTGACCCATGCCAA
GCAGATATTATACGCAATGATATCACAAAGACTTGTGTAGATGAAACAAATGTGGTTCGGTTTACAGGCTCCTCTTGGATAAAACATGGCACGGAGTGCA
CCCTCTGTCAGTGCAAGAATGGCCATATGTGTTGTTCAGTGGATCCCCAGTGCCTTCAGGAGCTGTGAAAAGAACTCATGACTTTGGTCTCCAGAAGGAA
GGAAAAAAATACAAATAAAGAATGTTATTCATCCTCAAAGACCTTACACCAAAAATGCACATAATTTTGAAAATAGTATTAAAACAATATTGCTTAATGT
AACCATTTGCGAAATGAATTTATGGAGGCAAAAATCCAATGGCTACTGAACACCAAATAACTGCACTACATTTGTCAGCTTGGGGCCAAATAAATAGCAA
TTCTTACTGATCATTTTGTGTACTTTTATGAGTATTCAGATGGAACTCAAGCAGAAATTACGACAAACTATGTAACGCCCTGAAAAGTTCAGTAGGTCTC
AAGGACAACAAGCAGATTTTTTTTTATTATAGTTTTCCAAATGGTTGAATTCCACCAAAACCCAGGAAAGCTGACTGTTTATTAATTTGTACTCCGAATG
CCACATGCGCACACCCACGCTGGAAAATGACCTATATCGCTTTGAGAGATGCATTTGTTTGATCCTTACCCTTAAAATGAATCTGTTACATTTCTCACTG
TTTATTACTTGCGCATTTTCTGGTTTGTCACTGATTTTTGGCTGAAATATTTTATTACATATTGTAGAAAGTGTATTTGAAAAAAAAATCCAATTGATAT
AAATGTGATAAAAGCACCTCTTATTATTTTGTAACCATAAGAAATCAACTATTATGTTATTCATGTATTGGCATGGTATAAAAGGTGTGCTCATTGGGGA
AGTCCATCGTTTTATGGGTTTTTTTCTTGCACTTATTATTTCTGAACCTGTTTAGTACTGTTGTGTTCTTGTGAAGATTTAAATAAATGTTTCTCTTACA
AATAAAAAAAAAAAAAAAA
5' EST: CX840097
[+]cttttcctaaacgagcttaaaaagaacagggcaacgcggcgcctggcacacctagtaatgtgaagggatgcccatatgtaccaataagcccagtcattca
cccacccccatgccaatcactagaggacacaacctgtgccgctgagcagtcggattctgcctgcaaaaacgctcagatcagctgctggaaggggcgcttg
ttcactccctcagagaaaagggacagtggagcctgtgcctccccctccctcctgaatccctggagtagcaattagtgtggctctccgagcagctccggcg
gagaggaatatccattgtctctaacaggttcggagcgaggatttccctgttccccagattcccctttgcaggcagatcgttcccgagtccccgagtccct
gctgtggggtgggtaggggtcggaccgaggctgccgccgggcacttattgggcagccctgcctagctgggtgctgttggagctaatgatgctagcgctgg
ggattccaagttgctggctcatccgctggctgcctgtgctgttctaggagggagcccggcactcacagcagcgctacactagcagcaggcacggagatta
tggactaagtgcatcggtgccagaatggagtttatattgggcatattctgcgttattttctgtctcagagcaggtgcaggctttggtgtggacccctccc
tgcagatagacatcttcgaggacttccaactgggagaggccacccctggagtgcagcangttcaaggattccataaccgga
3' EST: CX840096
[+]atttgtaagagaaacatttatttaaatcttcacaagaacacaacagtactaaacaggttcagaaataataagtgcaagaaaaaaacccataaaacgatgg
acttccccaatgagcacaccttttataccatgccaatacatgaataacataatagttgatttcttatggttacaaaataataagaggtgcttttatcaca
tttatatcaattggatttttttttcaaatacactttctacaatatgtaataaaatatttcagccaaaaatcagtgacaaaccagaaaatgcgcaagtaat
aaacagtgagaaatgtaacagattcattttaagggtaaggatcaaacaaatgcatctctcaaagcgatataggtcattttccagcgtgggtgtgcgcatg
tggcattcggagtacaaattaataaacagtcagctttcctgggttttggtggaattcaaccatttggaaaactataataaaaaaaaatctgcttgttgtc
cttgagacctactgaacttttcagggcgttacatagtttgtcgtaatttctgcttgagttccatctgaatactcataaaagtacacaaaatgatcagtaa
gaattgctatttatttggccccaagctgacaaatgtagtgcagttatttggtgttcagtagccattggatttttgcctccataaattcatttcgcnaatg
gttacattaagcaatattgttttaatactattttcaaaattatgtgcatttttggtgtaaggtctttgaggatgaataacattctttattt
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
Suppliers: