XB-CLONE-3642412
Clone Name: IMAGE:7659094
|
Gene:
slc2a1
|
Species: Xenopus tropicalis
|
|
|
Sequence:
Full length sequence: BC121858
[+]
GTCTGATCCAACGGGACTTTATTCTTCCGAACCGGAGCGAACCCCGGATTTCCCTTGTGTTTGTACTGGGCCCCGCCATGGAGTCGGAGGGCAAGATGAC
GGCGAGGTTGATGCTGGCTGTTTGCACGGCTGTGATTGGTTCCTTACAGTTTGGCTACAACACCGGGGTGATCAACGCGCCGCAAGAGGTGATCGAGGGC
TTCTACAATGCCACGTGGCTGGAGCGGTACAACGAGCCCATCCCAGAGTCCACCCTCACCTCCCTGTGGTCCCTGTCCGTGGCCATCTTCTCTGTGGGCG
GGATGGTCGGCTCCTTCTCCGTGGGGCTGTTTGTCAACCGATTCGGCAGGCGCAACTCCATGCTGATGGCCAACGTCCTGGCCTTCCTAGCCGCCATTTT
GATGGGATTCTCCAAGCTTGCAGTCTCCTTCGAGATGCTGATCATTGGCCGGTTTGTGGTTGGACTCTACTGTGGCCTCACCACCGGTTTCGTGCCAATG
TACGTCGGAGAAGTGTCCCCCACATCGCTGCGAGGAGCCCTGGGGACCCTGCACCAGTTGGGCGTGGTGGTTGGAATCCTTATTGCCCAGATCTTCGGGC
TGAAGCCAATCATGGGCAACGACTCCCTGTGGCCCTTCCTATTGGGCTGCATATTCATCCCGGCCATATTGCAGTGCATCATGCTGCCCTTCTGCCCCGA
AAGCCCTCGTTTCCTGCTCATTAATCGCAACGAGGAAGACAAAGCCAAGAGCGTGCTGAAGAAGCTCCGCGGCACCACCGACGTGAGCAGTGACCTGCAG
GAGATGAAGGAGGAGAGTCGGCAGATGATGCGGGAGAAGAAAGTCACCATCTTGGAACTGTTCCGCTCCCCGCTCTATCGCCAACCCATGTTCATCGCCA
TCATCCTGCAACTGTCCCAGCAGCTCTCTGGGATCAACGCGGTCTTTTACTACTCCACCATGATCTTCCAAAAGGCCCAAGTGGAGCAGCCGGTGTACGC
CACCATTGGCGCGGGGATTGTGAATACGGCCTTCACCGTCGTGTCGCTGTTTGTAGTGGAACGGGCCGGCCGGCGAACCCTTCACCTCATTGGACTGGGC
GGAATGGCGGTTTGTGCCATCCTGATGACCATCGCGTTGGCCCTGCTGGACAGCGTCGGTGGCATGTCCTATCTCAGCATTGTGGCCATCTTTGGCTTCG
TGGCCTTCTTTGAAATTGGCCCGGGGCCCATCCCATGGTTCATTGTAGCAGAACTCTTCAGCCAGGGCCCCAGACCCGCGGCCATCGCAGTCGCCGGCCT
TTCCAACTGGACTTCCAACTTTATAGTGGGAATGGGCTTCCAATACGTAGAGCAACTGTGCGGCGCCTACGTCTTCATCATCTTCACCGTCCTCCTCCTC
ATCTTCTTCGTCTTCACCTACTTCAAGGTGCCGGAGACCAAGGGGCGCACCTTCGACGAGATCGCCTCCGAGTTCCGCCAGGGCGAGGGCCAGATGGTCA
AACAGGCGGAGGAGCTGAACAGTTTGGGGCACAACGCCGACGACTCCCAAGTGTAACATTTCTACCCCCCCCCCCGGCACCTACCTCCTGTCGTTACCCC
CCTCGTCCCCCCCTTCAGTCGTTACTTGCCCCCAGGCCCGCGGTTGGTCGGCCGCCGTTTCCCGGAGGAGTCTGGGAGTGAGCGAGAGGGGGCAGGGAGT
TTATTTGGATGTATTTGCCCCTCCGGCCACACGGCCCGACCAGCCACAAACATTAACTCACTAATTTCATTTCCACGTGTGGCCGACATGAAGGAAAGAG
AAGGCGGAACCATAGAGCTCTATATATAATGCTAGATGGCTTCGTTATTTTAATGGATTATTTTTTTAATTAGTGTGAGCTTTTCACGTAAGGAAGATTT
TATCCCGGGATTCTGGGCAGTGGGGGGGGGGCGACCCCCCCGATCACCTTGGACTCTGTTTACATAACGTAGTATTTTTTTATGGTTTAGTTTTCCTTTA
ATATTTTTTGAGAAAGTGTAATGGCACCAAAAGGCTCGTTTGGACCCGATATATATACTGTATTGTGTGTGTGGGCCCCGGGGGGGGACCCTAATTTGCG
GTCCCTGACACTGGGTCACATGGGATTGGGGGGGGTATCTCCTCTGGCAGGATGTGGGGATCGGTCCTGGGGCAGCTAGAACCGAGGGGGCTCTAGAACT
GAGCTGTTATCGAGGGACAGATTCGGTTCAACTGATGATGTTCTAGAAACAGACTGGGGGGGCAATGAAAACCTGTTAGGGGGCCCCCAGATGGACAACT
CCAGACGTTTCCCAGCACCGGCACTTTACTCAGGCGGTGGGCACTGTGGCAGCTGATACCCCCACTTGTGGGCATTATGTGACCCCAATGAGTTTGGGCC
CTAAAACAGTAGAACGAGGGGACGTGGTCCCTAGTGGTGACCCTGGGTACTGCATCATTTCCAATAGACAGGGTGCCGGGGGGGCTTGATCCCCACTTCC
TGCCAGAGACCCCCCCCCCCCGAATCCCATCTCGCTCGCACTCACCCAGGGATGTTCCCATAGAGGAGACAGGGTGGTTACTAGGTTACGGGGGGGCTCT
GGTACAAGGTTGGGGGGGGGGGGGCGTTTTGCTGTAGAACTTGACATTCCGCATGTTTTTGATATTTGCAGCTGCTGTTTTGTTAGGGGGGGGTGCAGAG
AGACCCTGGGGGGGTTTATAAATCAGAAGCAGGGTGTTAGAATCCTAGGGGCCCCCCTAGGGGGGAAATGACAAACTGCAGTTAAACTGTGGGTGGGGCT
TCACTTACTGAGCAAGTGACCTATAATAATAACTGCCCCCCCCCCAGGCCCAGTCTCTATAGGTCGTTTCCATGGTAGGGGACAATGTGGCAGTAAATGC
TAGACCCAGGAGCTGGCACTTAGACTGGCAGTCAGTGTGAGCCCCCCTGCACCCCCTTCTATGGAGCCAGTGTAGCAATTGGGTTATGGATCATACACTA
CATGGGGCCCCCCCGGCCCCCCCTTGTACAGCCCCAGAGCTATTTATATATATTTATAGGTATAAGTATATATATATTTTTGTCGGATGGCGGTTCTGAT
GATACCGGAGCAATGACGATAACGTACTGTAAATATTTATTTTAGTCACATGGTTTGTTTTTTTGCACAATAGGTCAAAGCTGATAGGTCAGTTTTTATC
AATGATGAGAAATGAAATCTGCGCTGTTATTATTATTCCCGCCCTATTGGCTGTATTTGTGGCGCCCGGGGCCCCAACGTTACTGTTCATTATTCCTGGG
GCCCCGGTGTAGTTGCCCTTTATCCAGCATATAATGGGGGGAATAATAATTTATATTGAGGCTCCACCCAGAGACTGATCATTGGCCGCACAGAACGTTC
CCTATATGAGTATTGTGTTTCTATGGATACGTGGGAGCTGCCATGTTGCTGACACGGCCATTGTTCATAGACTAAAGCTACACCTATCCTTAACACTAGG
TGGCGCTGTTCTGCCTATGGGAATGGCTGAGGCTCGTGGTATTGCAGCTCTCACTAATAAGTATAAAATACACAGTGATCCTCCTGTTGGACAAGAGACG
AGGACTATTTCCCCTTTAACTCAAGGGATTGTGGGAAATGTGGATTTTGCTATGAAGCCCCCGTGTCGGTGTGTGTTTGTACCGGGTAATCGCCGCTCAT
TATCCTCACACTCGTTACTGTTGTTCTAGAGAGTTTGTTTTTTTTATTTATTGTGAGATTTTGTCTCGAATTAAAAATTGATGAAAAAAAAAAAAAAAAA
AAAAAA
5' EST: CX838574
[+]tctgatccaacgggactttattcttccgaaccggagcgaaccccggatttcccttgtgtttgtactgggccccgccatggagtcggagggcaagatgacg
gcgaggttgatgctggctgtttgcacggctgtgattggttccttacagtttggctacaacaccggggtgatcaacgcgccgcaagaggtgatcgagggct
tctacaatgccacgtggctggagcggtacaacgagcccatcccagagtccaccctcacctccctgtggtccctgtccgtggccatcttctctgtgggcgg
gatggtcggctccttctccgtggggctgtttgtcaaccgattcggcaggcgcaactccatgctgatggccaacgtcctggccttcctagccgccattttg
atgggattctccaagcttgcagtctccttcgagatgctgatcattggccggtttgtggttggactctactgtggcctcaccaccggtttcgtgccaatgt
acgtcggagaagtgtcccccacatcgctgcgaggagccctggggaccctgcaccagttgggcgtggtggttggaatccttattgcccagatcttcgggct
gaagccaatcatgggcaacgactccctgtggcccttcctattgggctgcatattcatcccggccatattgcagtgcatcatgctgcccttctgccccgaa
agccctcgtttcctgctcattaatcgcaacgaggaagacaaagccaagagcgtgctgaagaagctccgcggcaccaccgacgtgagcagtgacctgcagg
agatgaaggaggagagtcggcagatgatgcggg
3' EST: CX838573
[+]catcaatttttaattcgagacaaaatctcacaataaataaaaaaaacaaactctctagaacaacagtaacgagtgtgaggataatgagcggcgattaccc
ggtacaaacacacaccgacacgggggcttcatagcaaaatccacatttcccacaatcccttgagttaaaggggaaatagtcctcgtctcttgtccaacag
gaggatcactgtgtattttatacttattagtgagagctgcaataccacgagcctcagccattcccataggcagaacagcgccacctagtgttaaggatag
gtgtagctttagtctatgaacaatggccgtgtcagcaacatggcagctcccacgtatccatagaaacacaatactcatatagggaacgttctgtgcggcc
aatgatcagtctctgggtggagcctcaatataaattattattccccccattatatgctggataaagggcaactacaccggggccccaggaataatgaaca
gtaacgttggggccccgggcgccacaaatacagccaatagggcgggaataataataacagcgcagatttcatttctcatcattgataaaaactgacctat
cagctttgacctattgtgcaaaaaaacaaaccatgtgactaaaataaatatttacagtacgttatcgtcattgctccggtatcatcagaaccgccatccg
acaaaaatatatatatacttatacctataaatatatataaatagctctggggctgtacaa
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
Suppliers: